Eucgr.K02654 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.K02654 T344807_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.846 0.420
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.837 0.420
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.827 0.399
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02654.1 TCP 114 256

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29738.m001041 Ricinus communis 29738.m001041 I 0.837
30174.m008721 Ricinus communis 30174.m008721 I 0.865
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.836
TCP1 Arabidopsis thaliana AT1G67260 D 0.846
BRC2 Arabidopsis thaliana AT1G68800 I 0.834
BRC1 Arabidopsis thaliana AT3G18550 I 0.831
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.840
Bo1g117490 Brassica oleracea Bo1g117490 I 0.823
Bo2g061250 Brassica oleracea Bo2g061250 I 0.842
Bo5g117410 Brassica oleracea Bo5g117410 N 0.837
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.832
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.833
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.863
Bra037579 Brassica rapa Bra037579 I 0.823
Bra038350 Brassica rapa Bra038350 I 0.842
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.828
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.856
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.833
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.841
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.841
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.833
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.860
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.851
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.859
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.882
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.886
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.849
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.860
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.856
Cla016709 Citrullus lanatus Cla016709 I 0.853
Cla019282 Citrullus lanatus Cla019282 N 0.871
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.829
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.845
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.852
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.826
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.882
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.845
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.824
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.828
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.854
F775_01923 Aegilops tauschii F775_01923 I 0.842
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.837
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.834
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.843
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.848
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.855
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.845
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.862
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.840
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.851
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.831
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.832
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.848
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.822
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.833
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.858
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.823
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.837
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.832
MDP0000173048 Malus domestica MDP0000173048 I 0.862
MDP0000224810 Malus domestica MDP0000224810 N 0.834
mgf022233m Mimulus guttatus mgf022233m I 0.830
mgf026636m Mimulus guttatus mgf026636m I 0.824
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.822
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.842
OBART09G10040 Oryza barthii OBART09G10040 I 0.840
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.840
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.831
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.840
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.833
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.860
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.856
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.840
OS09G0410500 Oryza sativa OS09G0410500 I 0.840
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.832
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.827
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.833
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.828
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.845
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.840
PK12240.1 Cannabis sativa PK12240.1 D 0.827
PK19717.1 Cannabis sativa PK19717.1 D 0.837
Pm029002 Prunus mume Pm029002 I 0.831
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.827
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.843
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.892
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.883
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.826
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.831
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.822
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.870
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.851
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.891
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.836
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.866
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.866
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.833
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.848
Si015230m.g Setaria italica Si015230m.g I 0.851
Si033183m.g Setaria italica Si033183m.g I 0.833
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.843
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.852
TCM_011874 Theobroma cacao TCM_011874 I 0.825
TCM_012252 Theobroma cacao TCM_012252 I 0.876
TCM_019518 Theobroma cacao TCM_019518 I 0.845
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.837
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.838
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.833
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.833
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.833
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.827
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.824
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.833
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.828