CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g076020
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_4g076020
T200548_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES89488
GRAS
81
429
LLGLLLQCAECVAMDNLDFANDLLPEITELSSPFGTSPERVGAYFAQALQARVVSSCLGSYSPLTAKSVTLNQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDRVHIIDLDIMQGLQWPGFVPHPRFTVEEDPFESTGRRLADFASSLGLPFEFHPVEGKIGSVTEPGQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTQLRPKLITTVEQDLSHAGSFLARFVEALHYYSALFDALGDGLGVDSVERHMVEQQLLGCEIRNIIAVGGPKRTGEVKVERWGDELKRAGFRPVSLRGNPASQASLLLGMFPWRGYTLVEENGSLKLGWKDLSLLIASAWQ
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL80
Arabidopsis thaliana
AT5G48670
D
0.000
gene22916-v1.0-hybrid
Fragaria vesca
gene22916-v1.0-hybrid
I
0.000
SapurV1A.0442s0190
Salix purpurea
SapurV1A.0442s0190
I
0.000
SapurV1A.0442s0180
Salix purpurea
SapurV1A.0442s0180
I
0.000
SapurV1A.0066s0310
Salix purpurea
SapurV1A.0066s0310
I
0.000
orange1.1g040642m.g
Citrus sinensis
orange1.1g040642m.g
I
0.000
MDP0000925348
Malus domestica
MDP0000925348
I
0.000
MDP0000846004
Malus domestica
MDP0000846004
I
0.000
Lus10032108.g
Linum usitatissimum
Lus10032108.g
I
0.000
Lus10014578.g
Linum usitatissimum
Lus10014578.g
I
0.000
gene23924-v1.0-hybrid
Fragaria vesca
gene23924-v1.0-hybrid
I
0.000
gene22967-v1.0-hybrid
Fragaria vesca
gene22967-v1.0-hybrid
I
0.000
Thhalv10002346m.g
Eutrema salsugineum
Thhalv10002346m.g
I
0.000
gene18029-v1.0-hybrid
Fragaria vesca
gene18029-v1.0-hybrid
I
0.000
evm.TU.supercontig_117.18
Carica papaya
evm.TU.supercontig_117.18
I
0.000
evm.TU.contig_28448.4
Carica papaya
evm.TU.contig_28448.4
I
0.000
evm.TU.contig_25049.5
Carica papaya
evm.TU.contig_25049.5
I
0.000
Eucgr.E01737
Eucalyptus grandis
Eucgr.E01737
I
0.000
Ciclev10024463m.g
Citrus clementina
Ciclev10024463m.g
I
0.000
Ciclev10013728m.g
Citrus clementina
Ciclev10013728m.g
I
0.000
Ciclev10006519m.g
Citrus clementina
Ciclev10006519m.g
I
0.000
Thhalv10019681m.g
Eutrema salsugineum
Thhalv10019681m.g
I
0.000
LjT40B16.70.nc
Lotus japonicus
LjT40B16.70.nc
I
0.000
chr6.LjT19B22.120.nd
Lotus japonicus
chr6.LjT19B22.120.nd
I
0.000
Thhalv10024162m.g
Eutrema salsugineum
Thhalv10024162m.g
I
0.000
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
0.000
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
0.000
Thhalv10022373m.g
Eutrema salsugineum
Thhalv10022373m.g
I
0.000
Thhalv10019833m.g
Eutrema salsugineum
Thhalv10019833m.g
I
0.000
Thhalv10019810m.g
Eutrema salsugineum
Thhalv10019810m.g
I
0.000
Thhalv10019751m.g
Eutrema salsugineum
Thhalv10019751m.g
I
0.000
Cagra.1772s0003
Capsella grandiflora
Cagra.1772s0003
I
0.000
Thhalv10019579m.g
Eutrema salsugineum
Thhalv10019579m.g
I
0.000
Thhalv10019516m.g
Eutrema salsugineum
Thhalv10019516m.g
I
0.000
Thhalv10019481m.g
Eutrema salsugineum
Thhalv10019481m.g
I
0.000
Thhalv10019451m.g
Eutrema salsugineum
Thhalv10019451m.g
I
0.000
Thhalv10019449m.g
Eutrema salsugineum
Thhalv10019449m.g
I
0.000
Thhalv10012000m.g
Eutrema salsugineum
Thhalv10012000m.g
I
0.000
Thhalv10002350m.g
Eutrema salsugineum
Thhalv10002350m.g
I
0.000
Thhalv10002349m.g
Eutrema salsugineum
Thhalv10002349m.g
I
0.000
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.000
TCM_025670
Theobroma cacao
TCM_025670
I
0.000
Solyc01g102260.2
Solanum lycopersicum
Solyc01g102260.2
I
0.000
PRUPE_ppa019749mg
Prunus persica
PRUPE_ppa019749mg
I
0.000
PRUPE_ppa018168mg
Prunus persica
PRUPE_ppa018168mg
I
0.000
POPTR_0013s01880
Populus trichocarpa
POPTR_0013s01880
I
0.000
POPTR_0013s00350
Populus trichocarpa
POPTR_0013s00350
I
0.000
POPTR_0005s00420
Populus trichocarpa
POPTR_0005s00420
I
0.000
MTR_3g065100
Medicago truncatula
MTR_3g065100
I
0.000
Bostr.2570s0083
Boechera stricta
Bostr.2570s0083
I
0.000
GLYMA11G33460
Glycine max
GLYMA11G33460
I
0.000
Bra041022
Brassica rapa
Bra041022
I
0.000
Bra029469
Brassica rapa
Bra029469
I
0.000
Bra018490
Brassica rapa
Bra018490
I
0.000
Bo9g078450
Brassica oleracea
Bo9g078450
I
0.000
Bo5g145000
Brassica oleracea
Bo5g145000
I
0.000
Bo2g104810
Brassica oleracea
Bo2g104810
I
0.000
AT3G05860
Arabidopsis thaliana
AT3G05860
I
0.000
Cla005226
Citrullus lanatus
Cla005226
I
0.000
Bostr.2392s0039
Boechera stricta
Bostr.2392s0039
I
0.000
Cucsa.050930
Cucumis sativus
Cucsa.050930
I
0.000
cassava19828.m1
Manihot esculenta
cassava19828.m1
I
0.000
30199.m000879
Ricinus communis
30199.m000879
I
0.000
30128.m008984
Ricinus communis
30128.m008984
I
0.000
Pm004396
Prunus mume
Pm004396
I
0.000
Pm003257
Prunus mume
Pm003257
I
0.000
TCM_025671
Theobroma cacao
TCM_025671
I
0.000
Bostr.2570s0082
Boechera stricta
Bostr.2570s0082
I
0.000
Ca_13275
Cicer arietinum
Ca_13275
I
0.000
Ca_06495
Cicer arietinum
Ca_06495
I
0.000
VIT_14s0060g00300
Vitis vinifera
VIT_14s0060g00300
I
0.000
TCM_042799
Theobroma cacao
TCM_042799
I
0.000
TCM_026845
Theobroma cacao
TCM_026845
I
0.000
TCM_026842
Theobroma cacao
TCM_026842
I
0.000
Al_scaffold_0003_569
Arabidopsis lyrata
Al_scaffold_0003_569
I
0.000
MTR_1g084950
Medicago truncatula
MTR_1g084950
N
0.000
MTR_4g028720
Medicago truncatula
MTR_4g028720
N
0.000
TCM_023006
Theobroma cacao
TCM_023006
N
0.000