OGLUM09G10300 (Oryza glumaepatula)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OGLUM09G10300 T344100_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.842 0.538
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.825 0.462
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G10300.1 TCP 70 188

Links

Other TCP family TFs
Other Oryza glumaepatula TFs

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TB1 Oryza sativa OS03G0706500 D 0.842
PK12240.1 Cannabis sativa PK12240.1 D 0.825
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.833
BRC1 Arabidopsis thaliana AT3G18550 I 0.830
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.842
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.916
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.981
Bo3g071560 Brassica oleracea Bo3g071560 I 0.827
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.831
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.951
F775_01923 Aegilops tauschii F775_01923 I 0.936
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.828
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.831
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.916
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.924
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.945
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.911
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.963
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.949
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.943
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.827
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.836
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.858
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.932
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.969
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.933
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.947
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.828
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.824
OBART03G31290 Oryza barthii OBART03G31290 I 0.858
OBART09G10040 Oryza barthii OBART09G10040 I 0.981
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.842
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.921
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.858
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.923
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.962
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.842
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.914
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.981
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.829
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.937
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.965
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.858
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.924
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.842
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.916
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.981
OS08G0432300 Oryza sativa OS08G0432300 I 0.916
OS09G0410500 Oryza sativa OS09G0410500 I 0.981
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.844
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.837
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.856
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.850
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.823
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.829
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.836
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.840
Sb02g024450 Sorghum bicolor Sb02g024450 I 0.958
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.951
Si015230m.g Setaria italica Si015230m.g I 0.952
Si033183m.g Setaria italica Si033183m.g I 0.956
Si038692m.g Setaria italica Si038692m.g I 0.847
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.844
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.842
TCM_012252 Theobroma cacao TCM_012252 I 0.835
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.828
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.828
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.828
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.944
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.937
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.933
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.828
Cla016709 Citrullus lanatus Cla016709 I 0.831
Pm015499 Prunus mume Pm015499 I 0.836
Pm030202 Prunus mume Pm030202 I 0.829
30167.m000856 Ricinus communis 30167.m000856 I 0.825
30174.m008721 Ricinus communis 30174.m008721 I 0.859
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.875
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.848
mgf022233m Mimulus guttatus mgf022233m I 0.846
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.823
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.844
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.841
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.841
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.831
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.855
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.840
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.877
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.833
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.832
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.831
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.956
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.958
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.916
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.931
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.849
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.853
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.847
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.856
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.837
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.846
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.846
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.827
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.843
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.837
Bo5g117410 Brassica oleracea Bo5g117410 N 0.836
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.947
GRMZM2G414114 Zea mays GRMZM2G414114 N 0.822
GRMZM2G458087 Zea mays GRMZM2G458087 N 0.822
OBART08G15630 Oryza barthii OBART08G15630 N 0.897
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.822
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.822
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.822
Traes_2BS_03909B330 Triticum aestivum Traes_2BS_03909B330 N 0.836
Cla018797 Citrullus lanatus Cla018797 N 0.829
Cla019282 Citrullus lanatus Cla019282 N 0.851
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.824
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.822
MDP0000224810 Malus domestica MDP0000224810 N 0.858
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.838