Solyc04g050750.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc04g050750.1 T005455_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.756 0.800
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.731 0.800
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.731 0.800
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.731 0.800
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.708 0.800
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.699 0.760
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc04g050750.1.1 AP2 36 87

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.803
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.779
Bo2g016490 Brassica oleracea Bo2g016490 I 0.772
Bra023674 Brassica rapa Bra023674 I 0.772
mgf017629m Mimulus guttatus mgf017629m I 0.771
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.760
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.760
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.758
Bo9g155940 Brassica oleracea Bo9g155940 I 0.756
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.756
Bra002159 Brassica rapa Bra002159 I 0.756
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.756
DREB2G Arabidopsis thaliana AT5G18450 D 0.756
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.756
Pm003634 Prunus mume Pm003634 I 0.752
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.752
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.746
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.736
Bra008200 Brassica rapa Bra008200 I 0.736
Bo2g083920 Brassica oleracea Bo2g083920 I 0.736
MDP0000250924 Malus domestica MDP0000250924 I 0.735
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.735
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.735
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.733
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.733
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.733
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.731
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.731
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.731
DREB2D Arabidopsis thaliana AT1G75490 D 0.731
Pm006274 Prunus mume Pm006274 I 0.731
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.731
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.731
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.731
Bra015840 Brassica rapa Bra015840 I 0.731
Bo6g119660 Brassica oleracea Bo6g119660 I 0.731
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.731
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.730
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.729
MDP0000141335 Malus domestica MDP0000141335 I 0.729
MDP0000295902 Malus domestica MDP0000295902 I 0.729
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.728
Cla021113 Citrullus lanatus Cla021113 I 0.728
Ca_10770 Cicer arietinum Ca_10770 I 0.728
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.728
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.728
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.728
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.727
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.727
Bra003752 Brassica rapa Bra003752 I 0.727
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.727
30170.m014115 Ricinus communis 30170.m014115 I 0.727
Bo6g086320 Brassica oleracea Bo6g086320 I 0.727
29680.m001737 Ricinus communis 29680.m001737 I 0.727
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.727
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.726
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.726
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.726
PK07829.1 Cannabis sativa PK07829.1 I 0.726
MDP0000250927 Malus domestica MDP0000250927 I 0.726
TCM_034132 Theobroma cacao TCM_034132 I 0.726
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.726
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.725
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.720
mgf024545m Mimulus guttatus mgf024545m I 0.719
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.719
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.719
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.718
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.718
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.715
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.713
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.713
Bo3g013160 Brassica oleracea Bo3g013160 I 0.713
Bra006460 Brassica rapa Bra006460 I 0.713
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.713
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.713
DREB2C Oryza sativa OS08G0565200 I 0.713
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.713
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.713
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.713
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.713
OB08G30790 Oryza brachyantha OB08G30790 I 0.713
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.712
Cla022803 Citrullus lanatus Cla022803 I 0.712
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.712
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.712
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.712
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.712
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.711
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.710
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.710
Cla006713 Citrullus lanatus Cla006713 I 0.709
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.708
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.708
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.708
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.708
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.708
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.708
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.708
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.708
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.708
F775_05774 Aegilops tauschii F775_05774 I 0.708
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.708
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.708
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.707
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.706
TCM_026121 Theobroma cacao TCM_026121 I 0.705
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.704
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.703
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.701
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.700
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.699
PK07402.1 Cannabis sativa PK07402.1 D 0.699
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.698
Traes_2AL_3FB37A3E7 Triticum aestivum Traes_2AL_3FB37A3E7 I 0.698
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.698
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.698
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.698
TCM_043306 Theobroma cacao TCM_043306 I 0.697
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.697
TCM_043302 Theobroma cacao TCM_043302 I 0.697
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.695
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.695
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.695
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.695
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.695
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.693
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.693
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.692
29729.m002292 Ricinus communis 29729.m002292 I 0.691
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.691
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.691
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.691
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.690
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.688
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.687
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.687
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.686
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.686
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.686
OBART01G04210 Oryza barthii OBART01G04210 I 0.686
OB01G13930 Oryza brachyantha OB01G13930 I 0.686
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.686
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.686
DREB2A Oryza sativa OS01G0165000 I 0.686
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.686
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.686
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.686
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.685
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.684
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.684
Lus10002855.g Linum usitatissimum Lus10002855.g N 0.684
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.684
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.683
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.683
F775_02345 Aegilops tauschii F775_02345 I 0.683
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.683
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.683
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.683
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.683
Si024059m.g Setaria italica Si024059m.g I 0.683
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.683
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.682
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.681
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.681
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.681
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.680
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.679
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.679
Si002067m.g Setaria italica Si002067m.g I 0.679
PK08602.1 Cannabis sativa PK08602.1 D 0.678
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.678
Pm015262 Prunus mume Pm015262 I 0.678
MDP0000153866 Malus domestica MDP0000153866 I 0.678
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.678
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.678
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.678
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.677
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.677