PGSC0003DMG400028700 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400028700 T004483_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.756 0.837
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.731 0.837
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.731 0.837
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.731 0.837
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.708 0.837
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.699 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.690 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400073853 AP2 31 82

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.803
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.779
mgf017629m Mimulus guttatus mgf017629m I 0.771
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.760
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.760
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.758
Bra002159 Brassica rapa Bra002159 I 0.756
Bo9g155940 Brassica oleracea Bo9g155940 I 0.756
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.756
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.756
DREB2G Arabidopsis thaliana AT5G18450 D 0.756
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.756
Pm003634 Prunus mume Pm003634 I 0.752
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.752
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.746
Bo2g016490 Brassica oleracea Bo2g016490 I 0.737
Bra023674 Brassica rapa Bra023674 I 0.737
Bo2g083920 Brassica oleracea Bo2g083920 I 0.736
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.736
Bra008200 Brassica rapa Bra008200 I 0.736
MDP0000250924 Malus domestica MDP0000250924 I 0.735
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.735
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.735
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.733
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.733
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.733
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.731
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.731
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.731
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.731
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.731
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.731
Bo6g119660 Brassica oleracea Bo6g119660 I 0.731
Bra015840 Brassica rapa Bra015840 I 0.731
Pm006274 Prunus mume Pm006274 I 0.731
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.731
DREB2D Arabidopsis thaliana AT1G75490 D 0.731
cassava25887.m1 Manihot esculenta cassava25887.m1 I 0.730
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.729
MDP0000295902 Malus domestica MDP0000295902 I 0.729
MDP0000141335 Malus domestica MDP0000141335 I 0.729
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.728
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.728
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.728
Ca_10770 Cicer arietinum Ca_10770 I 0.728
Cla021113 Citrullus lanatus Cla021113 I 0.728
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.728
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.727
30170.m014115 Ricinus communis 30170.m014115 I 0.727
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.727
29680.m001737 Ricinus communis 29680.m001737 I 0.727
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.727
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.727
Bo6g086320 Brassica oleracea Bo6g086320 I 0.727
Bra003752 Brassica rapa Bra003752 I 0.727
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.726
TCM_034132 Theobroma cacao TCM_034132 I 0.726
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.726
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.726
MDP0000250927 Malus domestica MDP0000250927 I 0.726
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.726
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.725
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.720
mgf024545m Mimulus guttatus mgf024545m I 0.719
Sb07g023575 Sorghum bicolor Sb07g023575 I 0.719
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.719
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.715
OB08G30790 Oryza brachyantha OB08G30790 I 0.713
ORUFI08G26490 Oryza rufipogon ORUFI08G26490 I 0.713
Bra006460 Brassica rapa Bra006460 I 0.713
BGIOSGA026461 Oryza indica BGIOSGA026461 I 0.713
BGIOSGA026464 Oryza indica BGIOSGA026464 I 0.713
Bo3g013160 Brassica oleracea Bo3g013160 I 0.713
ORGLA08G0193700 Oryza glaberrima ORGLA08G0193700 I 0.713
DREB2C Oryza sativa OS08G0565200 I 0.713
OGLUM08G25470 Oryza glumaepatula OGLUM08G25470 I 0.713
ONIVA09G01190 Oryza nivara ONIVA09G01190 I 0.713
OPUNC08G21890 Oryza punctata OPUNC08G21890 I 0.713
OMERI08G18820 Oryza meridionalis OMERI08G18820 I 0.713
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.712
Cla022803 Citrullus lanatus Cla022803 I 0.712
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.712
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.712
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.712
Cucsa.231820 Cucumis sativus Cucsa.231820 I 0.712
Ciclev10022244m.g Citrus clementina Ciclev10022244m.g I 0.710
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.710
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.710
Cla006713 Citrullus lanatus Cla006713 I 0.709
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.708
GRMZM2G028386 Zea mays GRMZM2G028386 I 0.708
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.708
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.708
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.708
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.708
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.708
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.708
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.708
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.708
F775_05774 Aegilops tauschii F775_05774 I 0.708
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.708
TCM_026121 Theobroma cacao TCM_026121 I 0.705
LPERR08G12790 Leersia perrieri LPERR08G12790 I 0.704
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.701
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.700
PK07402.1 Cannabis sativa PK07402.1 D 0.699
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.699
LPERR08G20650 Leersia perrieri LPERR08G20650 I 0.698
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.698
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.698
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.697
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.696
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.696
chr1.CM0195.510.nd Lotus japonicus chr1.CM0195.510.nd I 0.695
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.695
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.695
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.695
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.695
Lus10024298.g Linum usitatissimum Lus10024298.g I 0.693
Lus10006127.g Linum usitatissimum Lus10006127.g I 0.693
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.692
PK07829.1 Cannabis sativa PK07829.1 I 0.691
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.691
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.691
29729.m002292 Ricinus communis 29729.m002292 I 0.691
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.691
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.690
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.690
PK08602.1 Cannabis sativa PK08602.1 D 0.690
GRMZM2G376255 Zea mays GRMZM2G376255 I 0.689
MDP0000703626 Malus domestica MDP0000703626 I 0.688
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.688
PRUPE_ppa009616mg Prunus persica PRUPE_ppa009616mg I 0.688
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.688
Gorai.007G359400 Gossypium raimondii Gorai.007G359400 I 0.688
MDP0000871361 Malus domestica MDP0000871361 I 0.688
Pm025865 Prunus mume Pm025865 I 0.688
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.688
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.687
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.687
Traes_2BL_B397F2CE3 Triticum aestivum Traes_2BL_B397F2CE3 I 0.687
OB01G13930 Oryza brachyantha OB01G13930 I 0.686
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.686
OBART01G04210 Oryza barthii OBART01G04210 I 0.686
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.686
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.686
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.686
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.686
DREB2A Oryza sativa OS01G0165000 I 0.686
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.686
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.686
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.686
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.686
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.685
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.684
Lus10010632.g Linum usitatissimum Lus10010632.g I 0.683
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.683
Traes_2DL_B32203C91 Triticum aestivum Traes_2DL_B32203C91 I 0.683
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.683
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.683
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.683
MLOC_66580 Hordeum vulgare MLOC_66580 I 0.683
Si024059m.g Setaria italica Si024059m.g I 0.683
Pavir.J22169 Panicum virgatum Pavir.J22169 I 0.683
Pavir.J25464 Panicum virgatum Pavir.J25464 I 0.683
F775_02345 Aegilops tauschii F775_02345 I 0.683
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.682
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.682
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.682
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.682
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.682
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.681
e_gw1.162.74.1 Physcomitrella patens e_gw1.162.74.1 I 0.681
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.681
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.681
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.680
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.680
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.680
MLOC_12223 Hordeum vulgare MLOC_12223 I 0.680
27810.m000639 Ricinus communis 27810.m000639 I 0.680
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.680
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.680
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.680
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.680
Ca_07264 Cicer arietinum Ca_07264 I 0.680
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.680
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.680
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.680
TCM_024756 Theobroma cacao TCM_024756 I 0.680
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.680
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.680
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.680
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.679
Si002067m.g Setaria italica Si002067m.g I 0.679
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.678
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.678
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.678
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.678
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.678
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.678
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.678
Pm015262 Prunus mume Pm015262 I 0.678
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.678
DREB2E Oryza sativa OS03G0174400 I 0.678
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.678
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.678
OBART03G05550 Oryza barthii OBART03G05550 I 0.678
MDP0000153866 Malus domestica MDP0000153866 I 0.678
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.678
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.678
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.678
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.678
Eucgr.F01607 Eucalyptus grandis Eucgr.F01607 I 0.678
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.678
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.678
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.677