Ciclev10015541m.g (Citrus clementina)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00447 (HSF_DNA-bind) IPR000232 Ciclev10015541m.g T243086_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.411 0.655
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.411 0.655
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.405 0.713
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.393 0.655
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.393 0.655
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.389 0.632
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.389 0.632
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.389 0.632
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.385 0.621
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.383 0.644
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.383 0.644
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.362 0.552
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.362 0.552
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.356 0.575
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.356 0.575
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.345 0.575
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.345 0.575
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.341 0.552
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.341 0.552
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10015540m HSF 15 105
Ciclev10015541m HSF 15 105

Links

Other HSF family TFs
Other Citrus clementina TFs

1382 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30131.m007272 Ricinus communis 30131.m007272 I 0.000
AAEL002381 Aedes aegypti AAEL002381 N 0.000
AAEL011414 Aedes aegypti AAEL011414 N 0.000
AALB010796 Anopheles albimanus AALB010796 N 0.000
AALB010797 Anopheles albimanus AALB010797 N 0.000
AARA003413 Anopheles arabiensis AARA003413 N 0.000
AARA003414 Anopheles arabiensis AARA003414 N 0.000
AATE003884 Anopheles atroparvus AATE003884 N 0.000
ACAC_0000817201 Angiostrongylus cantonensis ACAC_0000817201 N 0.000
ACEP16595 Atta cephalotes ACEP16595 I 0.000
ACHR003270 Anopheles christyi ACHR003270 N 0.000
ACHR003271 Anopheles christyi ACHR003271 I 0.000
ACOC_0000235301 Angiostrongylus costaricensis ACOC_0000235301 N 0.000
ACOM026234 Anopheles coluzzii ACOM026234 N 0.000
ACOM026236 Anopheles coluzzii ACOM026236 N 0.000
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I 0.000
ADAC005115 Anopheles darlingi ADAC005115 N 0.000
ADAC005122 Anopheles darlingi ADAC005122 N 0.000
ADIR000495 Anopheles dirus ADIR000495 N 0.000
ADIR000496 Anopheles dirus ADIR000496 N 0.000
AEPI002535 Anopheles epiroticus AEPI002535 N 0.000
AEPI002536 Anopheles epiroticus AEPI002536 N 0.000
AFAF013045 Anopheles farauti AFAF013045 N 0.000
AFUN009599 Anopheles funestus AFUN009599 N 0.000
AFUN009600 Anopheles funestus AFUN009600 N 0.000
AGAP012334 Anopheles gambiae AGAP012334 N 0.000
AGAP012335 Anopheles gambiae AGAP012335 N 0.000
ALUE_0000365901 Ascaris lumbricoides ALUE_0000365901 N 0.000
AMAG_00757 Allomyces macrogynus AMAG_00757 N 0.000
AMAG_02260 Allomyces macrogynus AMAG_02260 N 0.000
AMAM004579 Anopheles maculatus AMAM004579 N 0.000
AMAM007083 Anopheles maculatus AMAM007083 N 0.000
AMEC001570 Anopheles melas AMEC001570 N 0.000
AMEC017787 Anopheles melas AMEC017787 N 0.000
AMIN009362 Anopheles minimus AMIN009362 N 0.000
AMTR_s00171p00070550 Amborella trichopoda AMTR_s00171p00070550 I 0.000
ANCCAN_08230 Ancylostoma caninum ANCCAN_08230 I 0.000
ANCCAN_12424 Ancylostoma caninum ANCCAN_12424 I 0.000
ANCCAN_17708 Ancylostoma caninum ANCCAN_17708 I 0.000
ANCCAN_21638 Ancylostoma caninum ANCCAN_21638 I 0.000
ANCCEY_04224 Ancylostoma ceylanicum ANCCEY_04224 N 0.000
ANCDUO_11856 Ancylostoma duodenale ANCDUO_11856 I 0.000
ANCDUO_12352 Ancylostoma duodenale ANCDUO_12352 N 0.000
ANCDUO_24920 Ancylostoma duodenale ANCDUO_24920 I 0.000
AQUA002990 Anopheles quadriannulatus AQUA002990 N 0.000
AQUA002991 Anopheles quadriannulatus AQUA002991 N 0.000
ASIM_0001178701 Anisakis simplex ASIM_0001178701 N 0.000
ASIS014507 Anopheles sinensis ASIS014507 N 0.000
ASTEI02374 Anopheles stephensi ASTEI02374 N 0.000
ASU_05994 Ascaris suum ASU_05994 N 0.000
ASU_09087 Ascaris suum ASU_09087 N 0.000
BGIBMGA005288 Bombyx mori BGIBMGA005288 N 0.000
BGIBMGA005289 Bombyx mori BGIBMGA005289 I 0.000
BGIBMGA007393 Bombyx mori BGIBMGA007393 N 0.000
BGIOSGA002908 Oryza indica BGIOSGA002908 N 0.000
Bm8632 Brugia malayi Bm8632 N 0.000
Bo2g160920 Brassica oleracea Bo2g160920 I 0.000
Bo9g014140 Brassica oleracea Bo9g014140 I 0.000
Bostr.10199s0131 Boechera stricta Bostr.10199s0131 N 0.000
Bra026498 Brassica rapa Bra026498 I 0.000
Bra029371 Brassica rapa Bra029371 I 0.000
BXY_1081800 Bursaphelenchus xylophilus BXY_1081800 I 0.000
BXY_1081900 Bursaphelenchus xylophilus BXY_1081900 I 0.000
Cagra.0086s0060 Capsella grandiflora Cagra.0086s0060 I 0.000
CapteG172235 Capitella teleta CapteG172235 I 0.000
Carubv10001858m.g Capsella rubella Carubv10001858m.g I 0.000
CBG04066 Caenorhabditis briggsae CBG04066 N 0.000
CBG09136 Caenorhabditis briggsae CBG09136 N 0.000
CBN25379 Caenorhabditis brenneri CBN25379 I 0.000
Cflo_11824--XP_001120264.1_APIME Camponotus floridanus Cflo_11824--XP_001120264.1_APIME N 0.000
CJA04355 Caenorhabditis japonica CJA04355 N 0.000
Cla009222 Citrullus lanatus Cla009222 I 0.000
CLEC003860 Cimex lectularius CLEC003860 I 0.000
CPIJ002952 Culex quinquefasciatus CPIJ002952 N 0.000
CPIJ002953 Culex quinquefasciatus CPIJ002953 N 0.000
CPIJ020011 Culex quinquefasciatus CPIJ020011 I 0.000
CpipJ_CPIJ002952 Culex pipiens CpipJ_CPIJ002952 N 0.000
CpipJ_CPIJ002953 Culex pipiens CpipJ_CPIJ002953 N 0.000
CpipJ_CPIJ020011 Culex pipiens CpipJ_CPIJ020011 I 0.000
CRE03995 Caenorhabditis remanei CRE03995 N 0.000
CRE11852 Caenorhabditis remanei CRE11852 N 0.000
Cucsa.300030 Cucumis sativus Cucsa.300030 I 0.000
DICVIV_05502 Dictyocaulus viviparus DICVIV_05502 N 0.000
DME_0000779601 Dracunculus medinensis DME_0000779601 N 0.000
ECANG7_00770 Echinococcus canadensis ECANG7_00770 N 0.000
EmuJ_000894800 Echinococcus multilocularis EmuJ_000894800 N 0.000
ENSCJAG00000005187 Callithrix jacchus ENSCJAG00000005187 I 0.000
ENSCJAG00000031139 Callithrix jacchus ENSCJAG00000031139 I 0.000
ENSMMUG00000031258 Macaca mulatta ENSMMUG00000031258 I 0.000
ENSOGAG00000026034 Otolemur garnettii ENSOGAG00000026034 I 0.000
estExt_fgenesh1_pm.C_880025 Physcomitrella patens estExt_fgenesh1_pm.C_880025 I 0.000
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I 0.000
EV44_g2383 Erysiphe necator EV44_g2383 I 0.000
EVEC_0000079801 Enterobius vermicularis EVEC_0000079801 N 0.000
F775_29723 Aegilops tauschii F775_29723 I 0.000
HmgZ Drosophila melanogaster FBgn0010228 I 0.000
Ssrp Drosophila melanogaster FBgn0010278 N 0.000
HmgZ Drosophila yakuba FBgn0068145 I 0.000
GA14726 Drosophila pseudoobscura FBgn0074753 I 0.000
Ssrp Drosophila pseudoobscura FBgn0078456 N 0.000
GF11622 Drosophila ananassae FBgn0088662 I 0.000
GF12460 Drosophila ananassae FBgn0089497 N 0.000
GG19998 Drosophila erecta FBgn0112197 N 0.000
GG20749 Drosophila erecta FBgn0112936 I 0.000
GH20784 Drosophila grimshawi FBgn0128247 I 0.000
GH21151 Drosophila grimshawi FBgn0128613 N 0.000
GI18750 Drosophila mojavensis FBgn0141489 N 0.000
GI20867 Drosophila mojavensis FBgn0143601 I 0.000
GL11071 Drosophila persimilis FBgn0148681 N 0.000
GL17523 Drosophila persimilis FBgn0155126 I 0.000
GM15692 Drosophila sechellia FBgn0170608 I 0.000
GD25013 Drosophila simulans FBgn0196325 N 0.000
GD25171 Drosophila simulans FBgn0196483 I 0.000
GJ20604 Drosophila virilis FBgn0207743 I 0.000
GJ21774 Drosophila virilis FBgn0208892 N 0.000
GK15658 Drosophila willistoni FBgn0217663 I 0.000
GK22092 Drosophila willistoni FBgn0224077 N 0.000
GE11532 Drosophila yakuba FBgn0229332 N 0.000
GB54571 Apis mellifera GB54571 N 0.000
Gorai.008G147700 Gossypium raimondii Gorai.008G147700 I 0.000
GRMZM2G032252 Zea mays GRMZM2G032252 N 0.000
gw1.106.59.1 Physcomitrella patens gw1.106.59.1 I 0.000
gw1.106.60.1 Physcomitrella patens gw1.106.60.1 I 0.000
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I 0.000
HCOI01550200 Haemonchus contortus HCOI01550200 N 0.000
HMEL015307 Heliconius melpomene HMEL015307 N 0.000
HmN_000028000 Hymenolepis microstoma HmN_000028000 N 0.000
HPLM_0001324601 Haemonchus placei HPLM_0001324601 N 0.000
Hsal_00538--XP_001120264.1_APIME Harpegnathos saltator Hsal_00538--XP_001120264.1_APIME N 0.000
KGM_13851 Danaus plexippus KGM_13851 N 0.000
KGM_13852 Danaus plexippus KGM_13852 I 0.000
L596_g16476 Steinernema carpocapsae L596_g16476 N 0.000
L596_g28088 Steinernema carpocapsae L596_g28088 N 0.000
L798_13679 Zootermopsis nevadensis L798_13679 N 0.000
L889_g16198 Steinernema feltiae L889_g16198 N 0.000
L889_g9094 Steinernema feltiae L889_g9094 N 0.000
L892_g19058 Steinernema scapterisci L892_g19058 N 0.000
L892_g23618 Steinernema scapterisci L892_g23618 N 0.000
L893_g23503 Steinernema glaseri L893_g23503 N 0.000
L893_g29974 Steinernema glaseri L893_g29974 N 0.000
L898_g4830 Steinernema monticolum L898_g4830 N 0.000
L898_g7743 Steinernema monticolum L898_g7743 N 0.000
LCUP005047 Lucilia cuprina LCUP005047 N 0.000
LCUP016801 Lucilia cuprina LCUP016801 N 0.000
LDEC020995 Leptinotarsa decemlineata LDEC020995 N 0.000
LOAG_08062 Loa loa LOAG_08062 N 0.000
LPERR01G05200 Leersia perrieri LPERR01G05200 N 0.000
M7I_1578 Glarea lozoyensis M7I_1578 I 0.000
maker-nMf.1.1.scaf04887-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf04887-augustus-gene-0.6 N 0.000
MBM_02410 Marssonina brunnea MBM_02410 I 0.000
MCINX001064 Melitaea cinxia MCINX001064 I 0.000
MDOA007633 Musca domestica MDOA007633 N 0.000
MDOA009531 Musca domestica MDOA009531 N 0.000
MDOA014797 Musca domestica MDOA014797 I 0.000
MDP0000205665 Malus domestica MDP0000205665 I 0.000
mgf024995m Mimulus guttatus mgf024995m I 0.000
MhA1_Contig128.frz3.gene5 Meloidogyne hapla MhA1_Contig128.frz3.gene5 N 0.000
MhA1_Contig2971.frz3.fgene1 Meloidogyne hapla MhA1_Contig2971.frz3.fgene1 N 0.000
MhA1_Contig400.frz3.gene18 Meloidogyne hapla MhA1_Contig400.frz3.gene18 N 0.000
Minc01744 Meloidogyne incognita Minc01744 N 0.000
Minc03634 Meloidogyne incognita Minc03634 N 0.000
Minc04648 Meloidogyne incognita Minc04648 N 0.000
Minc10016 Meloidogyne incognita Minc10016 N 0.000
ML09221a Mnemiopsis leidyi ML09221a N 0.000
MLOC_27773 Hordeum vulgare MLOC_27773 I 0.000
nAv.1.0.1.g08227 Acanthocheilonema viteae nAv.1.0.1.g08227 N 0.000
NBR_0000004401 Nippostrongylus brasiliensis NBR_0000004401 N 0.000
NBR_0001277401 Nippostrongylus brasiliensis NBR_0001277401 N 0.000
NCU02819 Neurospora crassa NCU02819 D 0.000
nDi.2.2.2.g08508 Dirofilaria immitis nDi.2.2.2.g08508 N 0.000
NECAME_17555 Necator americanus NECAME_17555 N 0.000
NECAME_17981 Necator americanus NECAME_17981 N 0.000
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I 0.000
nLs.2.1.2.g04082 Litomosoides sigmodontis nLs.2.1.2.g04082 N 0.000
nOo.2.0.1.g04693 Onchocerca ochengi nOo.2.0.1.g04693 N 0.000
OB01G15440 Oryza brachyantha OB01G15440 N 0.000
OBART01G05540 Oryza barthii OBART01G05540 N 0.000
OESDEN_09619 Oesophagostomum dentatum OESDEN_09619 N 0.000
OGLUM01G06010 Oryza glumaepatula OGLUM01G06010 N 0.000
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I 0.000
OLONG_023518 Oryza longistaminata OLONG_023518 N 0.000
OMERI01G05760 Oryza meridionalis OMERI01G05760 N 0.000
ONIVA01G06280 Oryza nivara ONIVA01G06280 N 0.000
OPUNC01G05380 Oryza punctata OPUNC01G05380 N 0.000
OPUNC02G20230 Oryza punctata OPUNC02G20230 N 0.000
ORGLA01G0051500 Oryza glaberrima ORGLA01G0051500 N 0.000
ORUFI01G05970 Oryza rufipogon ORUFI01G05970 N 0.000
SSRP1-A Oryza sativa OS01G0184900 N 0.000
Pavir.Ea00282 Panicum virgatum Pavir.Ea00282 N 0.000
Pavir.J08546 Panicum virgatum Pavir.J08546 N 0.000
Pm006054 Prunus mume Pm006054 I 0.000
PPA02261 Pristionchus pacificus PPA02261 N 0.000
PPA14042 Pristionchus pacificus PPA14042 N 0.000
Ppa-hmg-1.1 Pristionchus pacificus PPA22767 N 0.000
PPAI002521 Phlebotomus papatasi PPAI002521 N 0.000
PPAI002522 Phlebotomus papatasi PPAI002522 I 0.000
PRUPE_ppa026912mg Prunus persica PRUPE_ppa026912mg I 0.000
PTRK_0001490800 Parastrongyloides trichosuri PTRK_0001490800 N 0.000
RPRC006380 Rhodnius prolixus RPRC006380 I 0.000
RSKR_0000128800 Rhabditophanes kr3021 RSKR_0000128800 N 0.000
RSKR_0000171200 Rhabditophanes kr3021 RSKR_0000171200 N 0.000
RSKR_0000472700 Rhabditophanes kr3021 RSKR_0000472700 N 0.000
RSKR_0000540800 Rhabditophanes kr3021 RSKR_0000540800 N 0.000
RSKR_0000587700 Rhabditophanes kr3021 RSKR_0000587700 N 0.000
RSKR_0000733200 Rhabditophanes kr3021 RSKR_0000733200 N 0.000
SapurV1A.0766s0120 Salix purpurea SapurV1A.0766s0120 I 0.000
Sb03g003450 Sorghum bicolor Sb03g003450 N 0.000
SBOR_0403 Sclerotinia borealis SBOR_0403 I 0.000
scaffold113-EXSNAP2012.49 Pristionchus exspectatus scaffold113-EXSNAP2012.49 N 0.000
scaffold1425-EXSNAP2012.3 Pristionchus exspectatus scaffold1425-EXSNAP2012.3 N 0.000
scaffold164-EXSNAP2012.19 Pristionchus exspectatus scaffold164-EXSNAP2012.19 N 0.000
Si000646m.g Setaria italica Si000646m.g N 0.000
SMAC_00615 Sordaria macrospora SMAC_00615 I 0.000
SMAR015352 Strigamia maritima SMAR015352 N 0.000
SMUV_0000499601 Syphacia muris SMUV_0000499601 N 0.000
SNAPOd2T00000181001 Oikopleura dioica SNAPOd2T00000181001 N 0.000
SPAL_0000986100 Strongyloides papillosus SPAL_0000986100 N 0.000
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I 0.000
SSTP_0001024100 Strongyloides stercoralis SSTP_0001024100 N 0.000
SVE_0294800 Strongyloides venezuelensis SVE_0294800 N 0.000
TASK_0000475801 Taenia asiatica TASK_0000475801 N 0.000
TC012866 Tribolium castaneum TC012866 N 0.000
TCM_007659 Theobroma cacao TCM_007659 I 0.000
TCNE_0000332201 Toxocara canis TCNE_0000332201 N 0.000
TCNE_0001025901 Toxocara canis TCNE_0001025901 N 0.000
TELCIR_02603 Teladorsagia circumcincta TELCIR_02603 N 0.000
tetur02g08250 Tetranychus urticae tetur02g08250 N 0.000
Thhalv10004817m.g Eutrema salsugineum Thhalv10004817m.g N 0.000
Traes_1AS_3FCB35E65 Triticum aestivum Traes_1AS_3FCB35E65 I 0.000
Traes_1BS_15F9D276D Triticum aestivum Traes_1BS_15F9D276D I 0.000
Traes_1DS_C7F1E9F38 Triticum aestivum Traes_1DS_C7F1E9F38 I 0.000
TsM_000111500 Taenia solium TsM_000111500 N 0.000
TTAC_0000692101 Hydatigera taeniaeformis TTAC_0000692101 N 0.000
HMGB6 Vitis vinifera VIT_10s0071g00870 I 0.000
hmg-1.1 Caenorhabditis elegans WBGene00001971 N 0.000
hmg-3 Caenorhabditis elegans WBGene00001973 N 0.000
WBGene00238628 Onchocerca volvulus WBGene00238628 N 0.000
YQE_02071 Dendroctonus ponderosae YQE_02071 N 0.000