OBART03G12240 (Oryza barthii)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 OBART03G12240 T275485_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK21687.1
M01282_2.00 		Cannabis sativa
HWAAACCYH
DRGGTTTWD		 PBM
Lambert et al.(2019)
pTH11299 		0.909 0.957
TRP2
M07092_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCC
GGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_col_a 		0.901 0.936
TRP2
M07093_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCT
AGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP2_colamp_a 		0.901 0.936
TRP1
M07148_2.00 		Arabidopsis thaliana
AAACCCTAAACCCTAAACCCTAA
TTAGGGTTTAGGGTTTAGGGTTT		 Dap-seq
OMalley et al.(2016)
TRP1_col 		0.891 0.957
TRP5
M01266_2.00 		Arabidopsis thaliana
NHWAAACCYH
DRGGTTTWDN		 PBM
Lambert et al.(2019)
pTH9963 		0.849 0.957
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART03G12240.1 Myb 629 679

Links

Other Myb/SANT family TFs
Other Oryza barthii TFs

197 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008984 Ricinus communis 30128.m008984 I
30199.m000879 Ricinus communis 30199.m000879 I
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
AT3G05860 Arabidopsis thaliana AT3G05860 I
AGL80 Arabidopsis thaliana AT5G48670 D
Bo2g104810 Brassica oleracea Bo2g104810 I
Bo9g078450 Brassica oleracea Bo9g078450 I
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Bra018490 Brassica rapa Bra018490 I
Bra029469 Brassica rapa Bra029469 I
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I
Carubv10014232m.g Capsella rubella Carubv10014232m.g I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
Ca_06495 Cicer arietinum Ca_06495 I
Ca_13275 Cicer arietinum Ca_13275 I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I
Cla005226 Citrullus lanatus Cla005226 I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I
evm.TU.supercontig_100.22 Carica papaya evm.TU.supercontig_100.22 N
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
GLYMA11G33460 Glycine max GLYMA11G33460 I
GLYMA18G04760 Glycine max GLYMA18G04760 I
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I
GRMZM5G853066 Zea mays GRMZM5G853066 N
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
Lus10014578.g Linum usitatissimum Lus10014578.g I
Lus10014883.g Linum usitatissimum Lus10014883.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
MDP0000846004 Malus domestica MDP0000846004 I
MDP0000925348 Malus domestica MDP0000925348 I
mgf026186m Mimulus guttatus mgf026186m I
MTR_3g065100 Medicago truncatula MTR_3g065100 I
Pm003257 Prunus mume Pm003257 I
Pm004396 Prunus mume Pm004396 I
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025670 Theobroma cacao TCM_025670 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_025676 Theobroma cacao TCM_025676 N
TCM_026842 Theobroma cacao TCM_026842 I
TCM_026845 Theobroma cacao TCM_026845 I
TCM_042799 Theobroma cacao TCM_042799 I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I