NR2E3 (Otolemur garnettii)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSOGAG00000006128 T304119_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NR2E3
M00373_2.00 		Homo sapiens
NRAGATCAMN
NKTGATCTYN		 PBM
Barrera et al.(2016)
NR2E3_REF 		0.987 1.000
Nr2e3
M02708_2.00 		Mus musculus
AAGCTTD
HAAGCTT		 SELEX
Mathelier et al.(2014)
MA0164.1 		0.987 1.000
Nr2e3
M09328_2.00 		Mus musculus
NAAGTCAAAARKCA
TGMYTTTTGACTTN		 Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C 		0.987 1.000
NR2E3
M00372_2.00 		Homo sapiens
AAAGATCA
TGATCTTT		 PBM
Barrera et al.(2016)
NR2E3_R77Q 		0.987 0.986
NR2E3
M00370_2.00 		Homo sapiens
NNNWRABATCANN
NNTGATVTYWNNN		 PBM
Barrera et al.(2016)
NR2E3_R76Q 		0.985 0.986
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.983 0.986
NR2E3
M00369_2.00 		Homo sapiens
NGGGRTCAHN
NDTGAYCCCN		 PBM
Barrera et al.(2016)
NR2E3_G56R 		0.980 0.986
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.977 0.843
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.977 0.843
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000005474 Nuclear receptor 45 115

Links

Other Nuclear receptor family TFs
Other Otolemur garnettii TFs

170 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1F Arabidopsis thaliana AT1G12610 D
DREB1C Arabidopsis thaliana AT4G25470 D
DREB1D Arabidopsis thaliana AT5G51990 D
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D
ddf2 Arabidopsis lyrata fgenesh2_kg.2__175__AT1G63030.1 D
AMTR_s00095p00096190 Amborella trichopoda AMTR_s00095p00096190 I
Bo01335s010 Brassica oleracea Bo01335s010 I
Bo5g016750 Brassica oleracea Bo5g016750 I
Bo8g108050 Brassica oleracea Bo8g108050 I
Bo9g104770 Brassica oleracea Bo9g104770 I
Bra016763 Brassica rapa Bra016763 I
Bra026963 Brassica rapa Bra026963 I
Bra027612 Brassica rapa Bra027612 I
Bra028290 Brassica rapa Bra028290 I
GLYMA05G03560 Glycine max GLYMA05G03560 I
GLYMA09G27180 Glycine max GLYMA09G27180 I
GLYMA12G09130 Glycine max GLYMA12G09130 I
GLYMA12G30740 Glycine max GLYMA12G30740 I
GLYMA13G39540 Glycine max GLYMA13G39540 I
GLYMA17G14111 Glycine max GLYMA17G14111 I
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I
MTR_2g085015 Medicago truncatula MTR_2g085015 I
MTR_4g102660 Medicago truncatula MTR_4g102660 I
MTR_5g010930 Medicago truncatula MTR_5g010930 I
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I
PRUPE_ppa017761mg Prunus persica PRUPE_ppa017761mg I
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I
CBF4 Arabidopsis lyrata scaffold_801637.1 I
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I
VIT_06s0061g01400 Vitis vinifera VIT_06s0061g01400 I
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I
Ca_08732 Cicer arietinum Ca_08732 I
Cla002362 Citrullus lanatus Cla002362 I
Cla006315 Citrullus lanatus Cla006315 I
Cla011674 Citrullus lanatus Cla011674 I
Pm023769 Prunus mume Pm023769 I
Pm023772 Prunus mume Pm023772 I
Pm023775 Prunus mume Pm023775 I
30147.m014313 Ricinus communis 30147.m014313 I
30190.m011119 Ricinus communis 30190.m011119 I
30190.m011120 Ricinus communis 30190.m011120 I
60638.m00016 Ricinus communis 60638.m00016 I
cassava17064.m1 Manihot esculenta cassava17064.m1 I
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I
cassava35062.m1 Manihot esculenta cassava35062.m1 I
cassava41192.m1 Manihot esculenta cassava41192.m1 I
Cucsa.251030 Cucumis sativus Cucsa.251030 I
Cucsa.302750 Cucumis sativus Cucsa.302750 I
mgf017136m Mimulus guttatus mgf017136m I
mgf026339m Mimulus guttatus mgf026339m I
mgf026642m Mimulus guttatus mgf026642m I
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I
Aquca_122_00012 Aquilegia coerulea Aquca_122_00012 I
Aquca_122_00013 Aquilegia coerulea Aquca_122_00013 I
Bostr.13671s0200 Boechera stricta Bostr.13671s0200 I
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I
Bostr.22157s0019 Boechera stricta Bostr.22157s0019 I
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I
Cagra.23885s0001 Capsella grandiflora Cagra.23885s0001 I
Carubv10010303m.g Capsella rubella Carubv10010303m.g I
Carubv10021910m.g Capsella rubella Carubv10021910m.g I
Carubv10027759m.g Capsella rubella Carubv10027759m.g I
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I
Lus10001871.g Linum usitatissimum Lus10001871.g I
Lus10006332.g Linum usitatissimum Lus10006332.g I
Lus10006334.g Linum usitatissimum Lus10006334.g I
Lus10029601.g Linum usitatissimum Lus10029601.g I
Lus10029602.g Linum usitatissimum Lus10029602.g I
MDP0000154764 Malus domestica MDP0000154764 I
MDP0000198054 Malus domestica MDP0000198054 I
orange1.1g029015m.g Citrus sinensis orange1.1g029015m.g I
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I
Thhalv10023865m.g Eutrema salsugineum Thhalv10023865m.g I
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I
PK23332.1 Cannabis sativa PK23332.1 I
chr2.CM0304.640.nd Lotus japonicus chr2.CM0304.640.nd I
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I