Sb02g024450 (Sorghum bicolor)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Sb02g024450 T344337_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.844 0.598
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.843 0.537
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g024450.1 TCP 102 225

Links

Other TCP family TFs
Other Sorghum bicolor TFs

126 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TB1 Oryza sativa OS03G0706500 D 0.844
PK12240.1 Cannabis sativa PK12240.1 D 0.843
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.841
BRC2 Arabidopsis thaliana AT1G68800 I 0.829
BRC1 Arabidopsis thaliana AT3G18550 I 0.839
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.844
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.918
BGIOSGA030744 Oryza indica BGIOSGA030744 I 0.957
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.869
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.944
F775_01923 Aegilops tauschii F775_01923 I 0.919
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.829
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.827
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.831
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.928
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.921
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.947
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.924
GRMZM2G064628 Zea mays GRMZM2G064628 I 0.965
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.957
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.943
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.837
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.854
LPERR03G25950 Leersia perrieri LPERR03G25950 I 0.843
LPERR08G12880 Leersia perrieri LPERR08G12880 I 0.930
LPERR09G06870 Leersia perrieri LPERR09G06870 I 0.961
MLOC_4614 Hordeum vulgare MLOC_4614 I 0.934
MLOC_58142 Hordeum vulgare MLOC_58142 I 0.935
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.827
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.825
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.837
OBART03G31290 Oryza barthii OBART03G31290 I 0.848
OBART09G10040 Oryza barthii OBART09G10040 I 0.958
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.844
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.918
OGLUM09G10300 Oryza glumaepatula OGLUM09G10300 I 0.958
OMERI03G27910 Oryza meridionalis OMERI03G27910 I 0.848
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.917
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.955
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.844
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.916
ONIVA09G09540 Oryza nivara ONIVA09G09540 I 0.957
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.828
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.935
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.957
ORGLA03G0289500 Oryza glaberrima ORGLA03G0289500 I 0.848
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.917
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.844
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.918
ORUFI09G10660 Oryza rufipogon ORUFI09G10660 I 0.957
OS08G0432300 Oryza sativa OS08G0432300 I 0.918
OS09G0410500 Oryza sativa OS09G0410500 I 0.958
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.845
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.824
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.841
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.846
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.839
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.835
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.829
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.832
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.831
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.941
Si015230m.g Setaria italica Si015230m.g I 0.944
Si033183m.g Setaria italica Si033183m.g I 0.960
Si038692m.g Setaria italica Si038692m.g I 0.848
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.831
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.846
TCM_012252 Theobroma cacao TCM_012252 I 0.822
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.827
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.827
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.827
Traes_5BL_19F383CC71 Triticum aestivum Traes_5BL_19F383CC71 I 0.931
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.930
TRIUR3_20728 Triticum urartu TRIUR3_20728 I 0.931
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.827
Cla002355 Citrullus lanatus Cla002355 I 0.831
Cla016709 Citrullus lanatus Cla016709 I 0.852
Pm015499 Prunus mume Pm015499 I 0.832
Pm030202 Prunus mume Pm030202 I 0.829
30167.m000856 Ricinus communis 30167.m000856 I 0.840
30174.m008721 Ricinus communis 30174.m008721 I 0.874
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.848
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.848
mgf022233m Mimulus guttatus mgf022233m I 0.866
mgf026636m Mimulus guttatus mgf026636m I 0.847
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.853
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.829
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.825
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.823
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.829
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.850
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.850
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.829
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.827
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.833
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.833
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.881
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.837
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.836
MDP0000173048 Malus domestica MDP0000173048 I 0.822
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.827
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I 0.962
Pavir.Bb02154 Panicum virgatum Pavir.Bb02154 I 0.953
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.911
Pavir.Fb01590 Panicum virgatum Pavir.Fb01590 I 0.920
Pavir.Ia00838 Panicum virgatum Pavir.Ia00838 I 0.850
Pavir.Ib04362 Panicum virgatum Pavir.Ib04362 I 0.854
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.847
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.846
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.849
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.846
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.846
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.827
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.846
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.848
Bo5g117410 Brassica oleracea Bo5g117410 N 0.825
BRADI3G36590 Brachypodium distachyon BRADI3G36590 N 0.949
OBART08G15630 Oryza barthii OBART08G15630 N 0.888
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.842
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.832
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.842
Traes_2AS_1A307CE26 Triticum aestivum Traes_2AS_1A307CE26 N 0.839
Cla018797 Citrullus lanatus Cla018797 N 0.832
Lus10032465.g Linum usitatissimum Lus10032465.g N 0.822
MDP0000224810 Malus domestica MDP0000224810 N 0.829
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.827