RSKR_0000342500 (Rhabditophanes kr3021)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 RSKR_0000342500 T310092_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.985 0.729
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.957 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RSKR_0000342500.1 Nuclear receptor 41 110

Links

Other Nuclear receptor family TFs
Other Rhabditophanes kr3021 TFs

276 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.944
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.955
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.984
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.836
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.904
ALUE_0000387101 Ascaris lumbricoides ALUE_0000387101 I 0.767
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.978
ANCCAN_08267 Ancylostoma caninum ANCCAN_08267 I 0.756
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.814
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.977
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.977
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.836
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.905
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.985
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.836
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.931
ASIM_0001423201 Anisakis simplex ASIM_0001423201 I 0.766
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.877
ASU_00859 Ascaris suum ASU_00859 I 0.767
ASU_02770 Ascaris suum ASU_02770 I 0.895
ASU_03657 Ascaris suum ASU_03657 I 0.888
ASU_03870 Ascaris suum ASU_03870 I 0.957
ASU_10584 Ascaris suum ASU_10584 I 0.916
ASU_12501 Ascaris suum ASU_12501 I 0.978
ASU_13587 Ascaris suum ASU_13587 I 0.836
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.986
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.810
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.810
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.984
Bm4980 Brugia malayi Bm4980 I 0.957
Bm5319 Brugia malayi Bm5319 I 0.989
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.957
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.874
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.989
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.853
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.991
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.976
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.845
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.946
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.865
CBG00093 Caenorhabditis briggsae CBG00093 I 0.753
CBG01866 Caenorhabditis briggsae CBG01866 I 0.985
CBG03844 Caenorhabditis briggsae CBG03844 I 0.957
CBG04204 Caenorhabditis briggsae CBG04204 I 0.766
CBG09380 Caenorhabditis briggsae CBG09380 I 0.795
CBG10855 Caenorhabditis briggsae CBG10855 I 0.892
CBG10857 Caenorhabditis briggsae CBG10857 I 0.862
CBG14485 Caenorhabditis briggsae CBG14485 I 0.859
CBG16594 Caenorhabditis briggsae CBG16594 I 0.969
CBG23318 Caenorhabditis briggsae CBG23318 I 0.891
CBG23319 Caenorhabditis briggsae CBG23319 I 0.935
CBN07240 Caenorhabditis brenneri CBN07240 I 0.753
CBN11572 Caenorhabditis brenneri CBN11572 I 0.861
CBN15481 Caenorhabditis brenneri CBN15481 I 0.841
CBN18198 Caenorhabditis brenneri CBN18198 I 0.957
CBN18824 Caenorhabditis brenneri CBN18824 I 0.796
CBN19235 Caenorhabditis brenneri CBN19235 I 0.985
CBN19472 Caenorhabditis brenneri CBN19472 I 0.796
CBN20518 Caenorhabditis brenneri CBN20518 I 0.969
CBN20749 Caenorhabditis brenneri CBN20749 I 0.957
CBN24827 Caenorhabditis brenneri CBN24827 I 0.893
CBN28528 Caenorhabditis brenneri CBN28528 I 0.841
CBN30215 Caenorhabditis brenneri CBN30215 I 0.883
CJA00680 Caenorhabditis japonica CJA00680 I 0.874
CJA01292 Caenorhabditis japonica CJA01292 I 0.903
CJA06153 Caenorhabditis japonica CJA06153 I 0.753
CJA08896 Caenorhabditis japonica CJA08896 I 0.892
CJA13458 Caenorhabditis japonica CJA13458 I 0.985
CJA16040 Caenorhabditis japonica CJA16040 I 0.859
CJA37776 Caenorhabditis japonica CJA37776 I 0.827
CRE00149 Caenorhabditis remanei CRE00149 I 0.892
CRE00606 Caenorhabditis remanei CRE00606 I 0.862
CRE00809 Caenorhabditis remanei CRE00809 I 0.859
CRE03310 Caenorhabditis remanei CRE03310 I 0.985
CRE08259 Caenorhabditis remanei CRE08259 I 0.957
CRE24074 Caenorhabditis remanei CRE24074 I 0.753
CRE25378 Caenorhabditis remanei CRE25378 I 0.968
CRE26981 Caenorhabditis remanei CRE26981 I 0.932
CRE26982 Caenorhabditis remanei CRE26982 I 0.891
CRE30089 Caenorhabditis remanei CRE30089 I 0.751
CRE30787 Caenorhabditis remanei CRE30787 I 0.839
D917_06779 Trichinella nativa D917_06779 I 0.798
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.944
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.882
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.984
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.836
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.951
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.984
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.851
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.846
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.882
EFV54558 Trichinella spiralis EFV54558 I 0.798
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.987
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.895
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.948
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.810
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.987
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.957
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.836
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.827
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.977
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.944
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.904
HCOI00891400 Haemonchus contortus HCOI00891400 I 0.762
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.899
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.840
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.985
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.904
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.869
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.985
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.904
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.829
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.977
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.898
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.950
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.989
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.989
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.784
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.916
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.860
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.978
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.789
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.903
L596_g702 Steinernema carpocapsae L596_g702 I 0.787
L889_g11570 Steinernema feltiae L889_g11570 I 0.865
L889_g1557 Steinernema feltiae L889_g1557 I 0.912
L889_g17247 Steinernema feltiae L889_g17247 I 0.939
L889_g17254 Steinernema feltiae L889_g17254 I 0.749
L889_g1891 Steinernema feltiae L889_g1891 I 0.891
L889_g22425 Steinernema feltiae L889_g22425 N 0.754
L889_g22901 Steinernema feltiae L889_g22901 I 0.916
L889_g29879 Steinernema feltiae L889_g29879 I 0.989
L889_g7780 Steinernema feltiae L889_g7780 I 0.989
L889_g8914 Steinernema feltiae L889_g8914 I 0.876
L892_g17612 Steinernema scapterisci L892_g17612 I 0.895
L892_g2422 Steinernema scapterisci L892_g2422 I 0.784
L892_g4134 Steinernema scapterisci L892_g4134 I 0.864
L892_g4169 Steinernema scapterisci L892_g4169 I 0.900
L892_g5067 Steinernema scapterisci L892_g5067 I 0.787
L892_g5079 Steinernema scapterisci L892_g5079 I 0.916
L892_g8671 Steinernema scapterisci L892_g8671 I 0.989
L893_g13285 Steinernema glaseri L893_g13285 I 0.950
L893_g15045 Steinernema glaseri L893_g15045 I 0.858
L893_g15276 Steinernema glaseri L893_g15276 I 0.916
L893_g21283 Steinernema glaseri L893_g21283 I 0.865
L893_g22683 Steinernema glaseri L893_g22683 I 0.875
L893_g25227 Steinernema glaseri L893_g25227 I 0.978
L893_g28857 Steinernema glaseri L893_g28857 I 0.907
L893_g3010 Steinernema glaseri L893_g3010 I 0.989
L893_g3565 Steinernema glaseri L893_g3565 I 0.895
L898_g22454 Steinernema monticolum L898_g22454 I 0.987
L898_g23058 Steinernema monticolum L898_g23058 I 0.865
L898_g26357 Steinernema monticolum L898_g26357 I 0.939
L898_g2764 Steinernema monticolum L898_g2764 I 0.989
L898_g30390 Steinernema monticolum L898_g30390 I 0.805
L898_g7537 Steinernema monticolum L898_g7537 I 0.760
L898_g8573 Steinernema monticolum L898_g8573 I 0.916
L898_g9866 Steinernema monticolum L898_g9866 I 0.913
LOAG_00300 Loa loa LOAG_00300 I 0.989
LOAG_08615 Loa loa LOAG_08615 I 0.956
LOAG_08636 Loa loa LOAG_08636 I 0.846
LOAG_16377 Loa loa LOAG_16377 I 0.874
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.971
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.799
MhA1_Contig70.frz3.gene31 Meloidogyne hapla MhA1_Contig70.frz3.gene31 I 0.791
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.826
Minc02318 Meloidogyne incognita Minc02318 I 0.792
Minc05752 Meloidogyne incognita Minc05752 I 0.792
Minc13747 Meloidogyne incognita Minc13747 I 0.826
Minc17538 Meloidogyne incognita Minc17538 I 0.826
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.846
NBR_0001473401 Nippostrongylus brasiliensis NBR_0001473401 I 0.756
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.902
NBR_0001903201 Nippostrongylus brasiliensis NBR_0001903201 I 0.795
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.989
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.846
NECAME_00872 Necator americanus NECAME_00872 I 0.978
NECAME_01070 Necator americanus NECAME_01070 I 0.836
NECAME_01944 Necator americanus NECAME_01944 I 0.834
NECAME_08394 Necator americanus NECAME_08394 I 0.905
NECAME_11999 Necator americanus NECAME_11999 I 0.755
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.985
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.972
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.890
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.892
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.753
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.862
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.861
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.839
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.957
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.891
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.852
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.989
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.955
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.848
nRc.2.0.1.g16639 Romanomermis culicivorax nRc.2.0.1.g16639 I 0.824
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.814
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.989
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.957
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.888
PEQ_0000894301 Parascaris equorum PEQ_0000894301 I 0.797
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.802
PPA06637 Pristionchus pacificus PPA06637 I 0.852
PPA10975 Pristionchus pacificus PPA10975 N 0.771
PPA16374 Pristionchus pacificus PPA16374 I 0.889
PPA20196 Pristionchus pacificus PPA20196 I 0.838
PPA21777 Pristionchus pacificus PPA21777 I 0.893
PPA22443 Pristionchus pacificus PPA22443 I 0.875
PPA24481 Pristionchus pacificus PPA24481 I 0.870
PPA29597 Pristionchus pacificus PPA29597 I 0.809
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.860
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.992
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.949
PTRK_0000861400 Parastrongyloides trichosuri PTRK_0000861400 I 0.757
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.988
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.978
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.928
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.976
RSKR_0000625800 Rhabditophanes kr3021 RSKR_0000625800 I 0.848
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.854
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.875
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.859
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.838
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.900
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.802
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.825
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.903
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.870
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.831
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.802
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.856
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.844
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.952
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.856
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.859
SMUV_0000369301 Syphacia muris SMUV_0000369301 I 0.752
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.922
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.895
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.987
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.764
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.845
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.977
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.949
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.928
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.928
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.978
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.819
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.988
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.992
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.988
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.949
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.845
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.973
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.978
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.928
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.830
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.758
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.992
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.992
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.775
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.988
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.819
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.978
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.928
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.845
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.949
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.977
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.821
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.989
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.957
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.861
TMUE_s0002006800 Trichuris muris TMUE_s0002006800 I 0.835
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.955
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.880
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.848
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.987