ONIVA03G38760 (Oryza nivara)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ONIVA03G38760 T042632_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
e_gw1.209.40.1
M01756_2.00 		Physcomitrella patens
NNCACGTGNN
NNCACGTGNN		 PBM
Weirauch et al.(2014)
pTH8070 		0.852 0.875
LRL2
M06738_2.00 		Arabidopsis thaliana
CACGTGSVDMNCACG
CGTGNKHBSCACGTG		 Dap-seq
OMalley et al.(2016)
bHLH69_col_a 		0.852 0.833
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA03G38760.1 bHLH 164 211
ONIVA03G38760.2 bHLH 142 189
ONIVA03G38760.3 bHLH 142 189

Links

Other bHLH family TFs
Other Oryza nivara TFs

230 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCP1 Arabidopsis thaliana AT1G67260 D
PK12240.1 Cannabis sativa PK12240.1 D
PK19717.1 Cannabis sativa PK19717.1 D
AC233950.1_FG002 Zea mays AC233950.1_FG002 I
BRC2 Arabidopsis thaliana AT1G68800 I
Bo2g055640 Brassica oleracea Bo2g055640 I
Bo2g061250 Brassica oleracea Bo2g061250 I
Bo6g099040 Brassica oleracea Bo6g099040 I
Bo6g103670 Brassica oleracea Bo6g103670 I
Bra004097 Brassica rapa Bra004097 I
Bra004212 Brassica rapa Bra004212 I
Bra034010 Brassica rapa Bra034010 I
Bra038350 Brassica rapa Bra038350 I
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I
GLYMA04G22407 Glycine max GLYMA04G22407 I
GLYMA05G07943 Glycine max GLYMA05G07943 I
GLYMA08G28691 Glycine max GLYMA08G28691 I
GLYMA10G39141 Glycine max GLYMA10G39141 I
GLYMA13G07475 Glycine max GLYMA13G07475 I
GLYMA17G13065 Glycine max GLYMA17G13065 I
GLYMA18G51581 Glycine max GLYMA18G51581 I
GLYMA19G05921 Glycine max GLYMA19G05921 I
GLYMA20G28670 Glycine max GLYMA20G28670 I
GRMZM2G031905 Zea mays GRMZM2G031905 I
GRMZM2G062711 Zea mays GRMZM2G062711 I
GRMZM2G110242 Zea mays GRMZM2G110242 I
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I
LPERR09G06870 Leersia perrieri LPERR09G06870 I
MLOC_70116 Hordeum vulgare MLOC_70116 I
MTR_1g103380 Medicago truncatula MTR_1g103380 I
MTR_4g111935 Medicago truncatula MTR_4g111935 I
MTR_6g017055 Medicago truncatula MTR_6g017055 I
MTR_7g018500 Medicago truncatula MTR_7g018500 I
OPUNC03G28490 Oryza punctata OPUNC03G28490 I
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I
Sb01g010690 Sorghum bicolor Sb01g010690 I
Sb02g024450 Sorghum bicolor Sb02g024450 I
SELMODRAFT_28794 Selaginella moellendorffii SELMODRAFT_28794 I
SELMODRAFT_7330 Selaginella moellendorffii SELMODRAFT_7330 I
Si033183m.g Setaria italica Si033183m.g I
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I
TCM_011874 Theobroma cacao TCM_011874 I
TCM_012252 Theobroma cacao TCM_012252 I
TCM_019518 Theobroma cacao TCM_019518 I
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I
TRIUR3_31795 Triticum urartu TRIUR3_31795 I
BRC2 Vitis vinifera VIT_01s0011g02920 I
TCP1 Vitis vinifera VIT_14s0083g00150 I
Cla002355 Citrullus lanatus Cla002355 I
Cla007227 Citrullus lanatus Cla007227 I
Cla016709 Citrullus lanatus Cla016709 I
Pm015499 Prunus mume Pm015499 I
Pm029002 Prunus mume Pm029002 I
Pm030202 Prunus mume Pm030202 I
29738.m001041 Ricinus communis 29738.m001041 I
30167.m000856 Ricinus communis 30167.m000856 I
30174.m008721 Ricinus communis 30174.m008721 I
cassava10552.m1 Manihot esculenta cassava10552.m1 I
cassava16230.m1 Manihot esculenta cassava16230.m1 I
cassava32886.m1 Manihot esculenta cassava32886.m1 I
cassava9378.m1 Manihot esculenta cassava9378.m1 I
Cucsa.031600 Cucumis sativus Cucsa.031600 I
Cucsa.238090 Cucumis sativus Cucsa.238090 I
Cucsa.280880 Cucumis sativus Cucsa.280880 I
Cucsa.283930 Cucumis sativus Cucsa.283930 I
mgf019480m Mimulus guttatus mgf019480m I
mgf022233m Mimulus guttatus mgf022233m I
mgf024687m Mimulus guttatus mgf024687m I
mgf026636m Mimulus guttatus mgf026636m I
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I
Carubv10020555m.g Capsella rubella Carubv10020555m.g I
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I
Lus10021713.g Linum usitatissimum Lus10021713.g I
Lus10035055.g Linum usitatissimum Lus10035055.g I
MDP0000173048 Malus domestica MDP0000173048 I
MDP0000272980 Malus domestica MDP0000272980 I
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I
Pavir.Ba01820 Panicum virgatum Pavir.Ba01820 I
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N
Cla019282 Citrullus lanatus Cla019282 N
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N
MDP0000224810 Malus domestica MDP0000224810 N