PMAA_013140 (Penicillium marneffei)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 PMAA_013140 T259456_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SMP1
M01557_2.00 		Saccharomyces cerevisiae
TTAATAAA
TTTATTAA		 PBM
Zhu et al.(2009)
Smp1 		0.750 0.750
SMP1
M08587_2.00 		Saccharomyces cerevisiae
BNDBMYWYAATTRWRNNWVNN
NNBWNNYWYAATTRWRKVHNV		 Misc
DeBoer et al.(2011)
YBR182C_864 		0.750 0.750
RLM1
M08590_2.00 		Saccharomyces cerevisiae
NTAWWWWTAG
CTAWWWWTAN		 Misc
DeBoer et al.(2011)
YPL089C_419 		0.750 0.750
RLM1
M08459_2.00 		Saccharomyces cerevisiae
NDWTCTAWWWATAGMYHN
NDRKCTATWWWTAGAWHN		 COMPILED
Mathelier et al.(2014)
MA0369.1 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_013140.t1 MADS box 10 57

Links

Other MADS box family TFs
Other Penicillium marneffei TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB2D Arabidopsis thaliana AT1G75490 D 0.000
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.000
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.000
PK07402.1 Cannabis sativa PK07402.1 D 0.000
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.000
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.000
AT2G40350 Arabidopsis thaliana AT2G40350 I 0.000
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.000
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.000
BGIOSGA018253 Oryza indica BGIOSGA018253 I 0.000
Bo1g141310 Brassica oleracea Bo1g141310 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
Bo2g016490 Brassica oleracea Bo2g016490 I 0.000
Bo2g083920 Brassica oleracea Bo2g083920 I 0.000
Bo3g013160 Brassica oleracea Bo3g013160 I 0.000
Bo3g063910 Brassica oleracea Bo3g063910 I 0.000
Bo4g190040 Brassica oleracea Bo4g190040 I 0.000
Bo6g086320 Brassica oleracea Bo6g086320 I 0.000
Bo6g119660 Brassica oleracea Bo6g119660 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bra001386 Brassica rapa Bra001386 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra003752 Brassica rapa Bra003752 I 0.000
Bra005852 Brassica rapa Bra005852 I 0.000
Bra006460 Brassica rapa Bra006460 I 0.000
Bra008200 Brassica rapa Bra008200 I 0.000
Bra015840 Brassica rapa Bra015840 I 0.000
Bra017011 Brassica rapa Bra017011 I 0.000
Bra023674 Brassica rapa Bra023674 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra034159 Brassica rapa Bra034159 I 0.000
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.000
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.000
BRADI3G12680 Brachypodium distachyon BRADI3G12680 I 0.000
F775_05774 Aegilops tauschii F775_05774 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.000
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.000
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.000
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.000
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.000
GLYMA07G19221 Glycine max GLYMA07G19221 I 0.000
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.000
GLYMA12G11150 Glycine max GLYMA12G11150 I 0.000
GLYMA12G32400 Glycine max GLYMA12G32400 I 0.000
GLYMA13G38030 Glycine max GLYMA13G38030 I 0.000
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.000
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.000
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.000
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.000
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.000
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.000
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.000
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.000
GSMUA_Achr3G00320_001 Musa acuminata GSMUA_Achr3G00320_001 I 0.000
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.000
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.000
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.000
LPERR05G09930 Leersia perrieri LPERR05G09930 I 0.000
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.000
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.000
MTR_3g112440 Medicago truncatula MTR_3g112440 I 0.000
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.000
MTR_5g083340 Medicago truncatula MTR_5g083340 I 0.000
OB01G13930 Oryza brachyantha OB01G13930 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.000
OBART03G05550 Oryza barthii OBART03G05550 I 0.000
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.000
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.000
OGLUM05G13290 Oryza glumaepatula OGLUM05G13290 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.000
OLONG_017780 Oryza longistaminata OLONG_017780 I 0.000
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.000
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.000
OMERI05G11290 Oryza meridionalis OMERI05G11290 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.000
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.000
ONIVA05G13030 Oryza nivara ONIVA05G13030 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.000
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.000
OPUNC05G10700 Oryza punctata OPUNC05G10700 I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.000
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.000
ORUFI05G13560 Oryza rufipogon ORUFI05G13560 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.000
DREB2E Oryza sativa OS03G0174400 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
PGSC0003DMG401023951 Solanum tuberosum PGSC0003DMG401023951 I 0.000
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.000
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.000
POPTR_0006s05320 Populus trichocarpa POPTR_0006s05320 I 0.000
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.000
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.000
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.000
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
SELMODRAFT_105485 Selaginella moellendorffii SELMODRAFT_105485 I 0.000
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.000
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.000
SELMODRAFT_38502 Selaginella moellendorffii SELMODRAFT_38502 I 0.000
Si002067m.g Setaria italica Si002067m.g I 0.000
Si022619m.g Setaria italica Si022619m.g I 0.000
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
TCM_026121 Theobroma cacao TCM_026121 I 0.000
TCM_043275 Theobroma cacao TCM_043275 I 0.000
TCM_043302 Theobroma cacao TCM_043302 I 0.000
TCM_043306 Theobroma cacao TCM_043306 I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.000
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.000
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.000
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.000
Ca_10770 Cicer arietinum Ca_10770 I 0.000
Ca_12446 Cicer arietinum Ca_12446 I 0.000
Ca_22585 Cicer arietinum Ca_22585 I 0.000
Cla001755 Citrullus lanatus Cla001755 I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cla012194 Citrullus lanatus Cla012194 I 0.000
Cla021113 Citrullus lanatus Cla021113 I 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm006274 Prunus mume Pm006274 I 0.000
Pm015262 Prunus mume Pm015262 I 0.000
Pm018989 Prunus mume Pm018989 I 0.000
29729.m002292 Ricinus communis 29729.m002292 I 0.000
30170.m014115 Ricinus communis 30170.m014115 I 0.000
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.000
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.000
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.000
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.000
Cucsa.130200 Cucumis sativus Cucsa.130200 I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.000
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.000
mgf007881m Mimulus guttatus mgf007881m I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
mgf024545m Mimulus guttatus mgf024545m I 0.000
Aquca_004_00452 Aquilegia coerulea Aquca_004_00452 I 0.000
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bostr.23794s0027 Boechera stricta Bostr.23794s0027 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.000
Cagra.0712s0008 Capsella grandiflora Cagra.0712s0008 I 0.000
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.000
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Carubv10002425m.g Capsella rubella Carubv10002425m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.000
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.000
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.000
Eucgr.A02390 Eucalyptus grandis Eucgr.A02390 I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
evm.TU.supercontig_51.23 Carica papaya evm.TU.supercontig_51.23 I 0.000
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.000
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.000
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.000
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.000
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.000
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.000
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.000
Gorai.011G235900 Gossypium raimondii Gorai.011G235900 I 0.000
Lus10003581.g Linum usitatissimum Lus10003581.g I 0.000
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.000
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.000
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.000
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.000
MDP0000141335 Malus domestica MDP0000141335 I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000153866 Malus domestica MDP0000153866 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MDP0000250924 Malus domestica MDP0000250924 I 0.000
MDP0000250927 Malus domestica MDP0000250927 I 0.000
MDP0000290585 Malus domestica MDP0000290585 I 0.000
MDP0000295902 Malus domestica MDP0000295902 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
MDP0000880312 Malus domestica MDP0000880312 I 0.000
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.000
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.000
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.000
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.000
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.000
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.000
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.000
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.000
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.000
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.000
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.000
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.000
PK07829.1 Cannabis sativa PK07829.1 I 0.000
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000