Gorai.008G285300 (Gossypium raimondii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Gorai.008G285300 T344870_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.842 0.331
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.008G285300.1 TCP 119 266

Links

Other TCP family TFs
Other Gossypium raimondii TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK12240.1 Cannabis sativa PK12240.1 D 0.842
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.840
BRC2 Arabidopsis thaliana AT1G68800 I 0.855
BRC1 Arabidopsis thaliana AT3G18550 I 0.852
BGIOSGA028717 Oryza indica BGIOSGA028717 I 0.833
Bo1g117490 Brassica oleracea Bo1g117490 I 0.862
Bo3g071560 Brassica oleracea Bo3g071560 I 0.843
Bra001710 Brassica rapa Bra001710 I 0.844
Bra004097 Brassica rapa Bra004097 I 0.838
Bra037579 Brassica rapa Bra037579 I 0.866
BRADI4G29980 Brachypodium distachyon BRADI4G29980 I 0.833
F775_01923 Aegilops tauschii F775_01923 I 0.838
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.855
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.888
GLYMA05G07943 Glycine max GLYMA05G07943 I 0.868
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.916
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.837
GRMZM2G055024 Zea mays GRMZM2G055024 I 0.833
GRMZM2G060319 Zea mays GRMZM2G060319 I 0.839
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.828
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.861
GRMZM2G166687 Zea mays GRMZM2G166687 I 0.827
GSMUA_Achr2G21050_001 Musa acuminata GSMUA_Achr2G21050_001 I 0.844
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.870
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.833
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.864
OGLUM08G16380 Oryza glumaepatula OGLUM08G16380 I 0.838
OMERI08G12900 Oryza meridionalis OMERI08G12900 I 0.842
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.832
ONIVA08G16720 Oryza nivara ONIVA08G16720 I 0.833
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.833
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.828
OPUNC09G08520 Oryza punctata OPUNC09G08520 I 0.831
ORGLA08G0137200 Oryza glaberrima ORGLA08G0137200 I 0.833
ORUFI08G17540 Oryza rufipogon ORUFI08G17540 I 0.833
OS08G0432300 Oryza sativa OS08G0432300 I 0.833
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.834
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.887
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.889
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.839
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.880
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.840
Sb07g021140 Sorghum bicolor Sb07g021140 I 0.839
Si033183m.g Setaria italica Si033183m.g I 0.824
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.838
TCM_012252 Theobroma cacao TCM_012252 I 0.952
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.833
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.834
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.833
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.855
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.833
Cla002355 Citrullus lanatus Cla002355 I 0.826
Pm030202 Prunus mume Pm030202 I 0.880
29738.m001041 Ricinus communis 29738.m001041 I 0.825
30167.m000856 Ricinus communis 30167.m000856 I 0.849
30174.m008721 Ricinus communis 30174.m008721 I 0.884
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.848
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.881
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.868
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.838
Cucsa.280880 Cucumis sativus Cucsa.280880 I 0.851
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.851
mgf024687m Mimulus guttatus mgf024687m I 0.887
mgf026636m Mimulus guttatus mgf026636m I 0.842
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.852
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.828
Bostr.19424s0807 Boechera stricta Bostr.19424s0807 I 0.880
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.856
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.831
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.856
Cagra.1681s0023 Capsella grandiflora Cagra.1681s0023 I 0.866
Carubv10013748m.g Capsella rubella Carubv10013748m.g I 0.866
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.856
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.827
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.914
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.908
Eucgr.K02654 Eucalyptus grandis Eucgr.K02654 I 0.851
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.824
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.847
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.841
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.935
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.843
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.851
MDP0000272980 Malus domestica MDP0000272980 I 0.839
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.914
Pavir.Fa00870 Panicum virgatum Pavir.Fa00870 I 0.845
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.866
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.886
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.861
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.858
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.858
chr4.LjB15O07.110.nc Lotus japonicus chr4.LjB15O07.110.nc I 0.884
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.832
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.866
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.843
Bo5g117410 Brassica oleracea Bo5g117410 N 0.857
GLYMA06G23410 Glycine max GLYMA06G23410 N 0.851
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.835
BRC1 Arabidopsis lyrata scaffold_302193.1 N 0.838
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.835
Cla018797 Citrullus lanatus Cla018797 N 0.858
Cla019282 Citrullus lanatus Cla019282 N 0.917
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.902
Cucsa.198860 Cucumis sativus Cucsa.198860 N 0.899
evm.TU.supercontig_13.48 Carica papaya evm.TU.supercontig_13.48 N 0.912
MDP0000219838 Malus domestica MDP0000219838 N 0.863
MDP0000224810 Malus domestica MDP0000224810 N 0.886
Thhalv10021948m.g Eutrema salsugineum Thhalv10021948m.g N 0.860