Cucsa.280880 (Cucumis sativus)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Cucsa.280880 T344648_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK12240.1
M01314_2.00 		Cannabis sativa
GGGSCCMS
SKGGSCCC		 PBM
Lambert et al.(2019)
pTH10180 		0.940 0.462
PK19717.1
M01318_2.00 		Cannabis sativa
GGGSCCCMC
GKGGGSCCC		 PBM
Lambert et al.(2019)
pTH10142 		0.868 0.428
TCP1
M07276_2.00 		Arabidopsis thaliana
RNNNDNHNDNNNDDDNNNRKGGGRCCCACH
DGTGGGYCCCMYNNNHHHNNNHNDNHNNNY		 Dap-seq
OMalley et al.(2016)
TCP1_col_a 		0.866 0.407
TB1
M01312_2.00 		Oryza sativa
GGSCCCCCYM
KRGGGGGSCC		 PBM
Lambert et al.(2019)
pTH8740 		0.823 0.414
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.280880.1 TCP 87 231

Links

Other TCP family TFs
Other Cucumis sativus TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_01093 Aquilegia coerulea Aquca_002_01093 I 0.936
Aquca_026_00208 Aquilegia coerulea Aquca_026_00208 I 0.865
TCP1 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001059 I 0.916
BRC2 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000933 I 0.948
TCP1 Arabidopsis thaliana AT1G67260 D 0.866
BRC2 Arabidopsis thaliana AT1G68800 I 0.948
Bostr.26959s0002 Boechera stricta Bostr.26959s0002 I 0.941
Bostr.26959s0184 Boechera stricta Bostr.26959s0184 I 0.901
BRADI1G11060 Brachypodium distachyon BRADI1G11060 I 0.835
Bo2g055640 Brassica oleracea Bo2g055640 I 0.847
Bo2g061250 Brassica oleracea Bo2g061250 I 0.902
Bo6g099040 Brassica oleracea Bo6g099040 I 0.866
Bo6g103670 Brassica oleracea Bo6g103670 I 0.892
Bra004097 Brassica rapa Bra004097 I 0.899
Bra004212 Brassica rapa Bra004212 I 0.876
Bra034010 Brassica rapa Bra034010 I 0.833
Bra038350 Brassica rapa Bra038350 I 0.902
PK12240.1 Cannabis sativa PK12240.1 D 0.940
PK19717.1 Cannabis sativa PK19717.1 D 0.868
Cagra.1125s0016 Capsella grandiflora Cagra.1125s0016 I 0.881
Cagra.1157s0001 Capsella grandiflora Cagra.1157s0001 I 0.941
Carubv10020487m.g Capsella rubella Carubv10020487m.g I 0.941
Carubv10020555m.g Capsella rubella Carubv10020555m.g I 0.872
evm.TU.supercontig_1401.1 Carica papaya evm.TU.supercontig_1401.1 I 0.925
evm.TU.supercontig_179.29 Carica papaya evm.TU.supercontig_179.29 I 0.880
Cla002355 Citrullus lanatus Cla002355 I 0.945
Cla007227 Citrullus lanatus Cla007227 I 0.899
Cla016709 Citrullus lanatus Cla016709 I 0.886
Cla019282 Citrullus lanatus Cla019282 N 0.824
Ciclev10024246m.g Citrus clementina Ciclev10024246m.g I 0.912
Ciclev10033382m.g Citrus clementina Ciclev10033382m.g I 0.917
orange1.1g035911m.g Citrus sinensis orange1.1g035911m.g I 0.912
orange1.1g039323m.g Citrus sinensis orange1.1g039323m.g I 0.917
Cucsa.031600 Cucumis sativus Cucsa.031600 I 0.901
Cucsa.113660 Cucumis sativus Cucsa.113660 N 0.834
Cucsa.238090 Cucumis sativus Cucsa.238090 I 0.912
Cucsa.283930 Cucumis sativus Cucsa.283930 I 0.908
Eucgr.B00699 Eucalyptus grandis Eucgr.B00699 I 0.905
Eucgr.J01466 Eucalyptus grandis Eucgr.J01466 I 0.876
Thhalv10019499m.g Eutrema salsugineum Thhalv10019499m.g I 0.858
gene03882-v1.0-hybrid Fragaria vesca gene03882-v1.0-hybrid I 0.944
GLYMA04G22407 Glycine max GLYMA04G22407 I 0.853
GLYMA08G28691 Glycine max GLYMA08G28691 I 0.878
GLYMA10G39141 Glycine max GLYMA10G39141 I 0.872
GLYMA13G07475 Glycine max GLYMA13G07475 I 0.886
GLYMA17G13065 Glycine max GLYMA17G13065 I 0.859
GLYMA18G51581 Glycine max GLYMA18G51581 I 0.881
GLYMA19G05921 Glycine max GLYMA19G05921 I 0.886
GLYMA20G28670 Glycine max GLYMA20G28670 I 0.866
Gorai.001G200400 Gossypium raimondii Gorai.001G200400 I 0.881
Gorai.007G007500 Gossypium raimondii Gorai.007G007500 I 0.827
Gorai.008G186800 Gossypium raimondii Gorai.008G186800 I 0.911
Gorai.008G285300 Gossypium raimondii Gorai.008G285300 I 0.851
MLOC_70116 Hordeum vulgare MLOC_70116 I 0.868
Lus10003078.g Linum usitatissimum Lus10003078.g I 0.837
Lus10021713.g Linum usitatissimum Lus10021713.g I 0.930
Lus10034072.g Linum usitatissimum Lus10034072.g I 0.839
Lus10035055.g Linum usitatissimum Lus10035055.g I 0.919
chr1.LjB10L14.10.nc Lotus japonicus chr1.LjB10L14.10.nc I 0.883
chr2.LjB17A04.40.nc Lotus japonicus chr2.LjB17A04.40.nc I 0.878
chr5.CM0357.550.nc Lotus japonicus chr5.CM0357.550.nc I 0.893
LjSGA_018294.2 Lotus japonicus LjSGA_018294.2 I 0.845
MDP0000173048 Malus domestica MDP0000173048 I 0.930
MDP0000224810 Malus domestica MDP0000224810 N 0.845
MDP0000272980 Malus domestica MDP0000272980 I 0.952
cassava10552.m1 Manihot esculenta cassava10552.m1 I 0.927
cassava16230.m1 Manihot esculenta cassava16230.m1 I 0.910
cassava32886.m1 Manihot esculenta cassava32886.m1 I 0.866
cassava9378.m1 Manihot esculenta cassava9378.m1 I 0.871
MTR_1g103380 Medicago truncatula MTR_1g103380 I 0.912
MTR_4g111935 Medicago truncatula MTR_4g111935 I 0.823
MTR_6g017055 Medicago truncatula MTR_6g017055 I 0.877
MTR_7g018500 Medicago truncatula MTR_7g018500 I 0.881
mgf019480m Mimulus guttatus mgf019480m I 0.895
mgf022233m Mimulus guttatus mgf022233m I 0.864
mgf024687m Mimulus guttatus mgf024687m I 0.904
mgf026636m Mimulus guttatus mgf026636m I 0.883
GSMUA_Achr10G25520_001 Musa acuminata GSMUA_Achr10G25520_001 I 0.841
GSMUA_Achr2G22480_001 Musa acuminata GSMUA_Achr2G22480_001 I 0.866
OGLUM03G31540 Oryza glumaepatula OGLUM03G31540 I 0.823
BGIOSGA013417 Oryza indica BGIOSGA013417 I 0.823
OMERI09G07770 Oryza meridionalis OMERI09G07770 I 0.829
ONIVA03G32600 Oryza nivara ONIVA03G32600 I 0.823
OPUNC03G28490 Oryza punctata OPUNC03G28490 I 0.852
OPUNC08G13710 Oryza punctata OPUNC08G13710 I 0.836
ORUFI03G32570 Oryza rufipogon ORUFI03G32570 I 0.823
TB1 Oryza sativa OS03G0706500 D 0.823
PDK_20s1689851g001 Phoenix dactylifera PDK_20s1689851g001 I 0.846
POPTR_0008s11470 Populus trichocarpa POPTR_0008s11470 I 0.907
POPTR_0010s14030 Populus trichocarpa POPTR_0010s14030 I 0.918
POPTR_0012s05660 Populus trichocarpa POPTR_0012s05660 I 0.870
POPTR_0015s03140 Populus trichocarpa POPTR_0015s03140 I 0.867
POPTR_0017s13980 Populus trichocarpa POPTR_0017s13980 I 0.920
Pm015499 Prunus mume Pm015499 I 0.876
Pm029002 Prunus mume Pm029002 I 0.932
Pm030202 Prunus mume Pm030202 I 0.869
PRUPE_ppa015026mg Prunus persica PRUPE_ppa015026mg I 0.869
PRUPE_ppa016240mg Prunus persica PRUPE_ppa016240mg I 0.932
PRUPE_ppa027156mg Prunus persica PRUPE_ppa027156mg I 0.876
29738.m001041 Ricinus communis 29738.m001041 I 0.914
30167.m000856 Ricinus communis 30167.m000856 I 0.928
30174.m008721 Ricinus communis 30174.m008721 I 0.855
SapurV1A.0301s0010 Salix purpurea SapurV1A.0301s0010 I 0.850
SapurV1A.0304s0080 Salix purpurea SapurV1A.0304s0080 I 0.917
SapurV1A.0583s0060 Salix purpurea SapurV1A.0583s0060 I 0.876
SapurV1A.0682s0140 Salix purpurea SapurV1A.0682s0140 I 0.932
SapurV1A.1895s0010 Salix purpurea SapurV1A.1895s0010 I 0.857
SapurV1A.1895s0020 Salix purpurea SapurV1A.1895s0020 I 0.857
Solyc03g119770.2 Solanum lycopersicum Solyc03g119770.2 I 0.879
Solyc04g006980.1 Solanum lycopersicum Solyc04g006980.1 I 0.921
Solyc05g009900.1 Solanum lycopersicum Solyc05g009900.1 I 0.906
Solyc06g069240.1 Solanum lycopersicum Solyc06g069240.1 N 0.840
PGSC0003DMG400000823 Solanum tuberosum PGSC0003DMG400000823 I 0.901
PGSC0003DMG400003362 Solanum tuberosum PGSC0003DMG400003362 I 0.830
PGSC0003DMG400004054 Solanum tuberosum PGSC0003DMG400004054 N 0.844
PGSC0003DMG400005705 Solanum tuberosum PGSC0003DMG400005705 I 0.879
PGSC0003DMG400007467 Solanum tuberosum PGSC0003DMG400007467 I 0.920
Sb01g010690 Sorghum bicolor Sb01g010690 I 0.864
TCM_011874 Theobroma cacao TCM_011874 I 0.912
TCM_012252 Theobroma cacao TCM_012252 I 0.872
TCM_019518 Theobroma cacao TCM_019518 I 0.885
Traes_4AL_75D069945 Triticum aestivum Traes_4AL_75D069945 I 0.861
Traes_4BS_DC076554D Triticum aestivum Traes_4BS_DC076554D I 0.861
Traes_4DS_59A46B69A Triticum aestivum Traes_4DS_59A46B69A I 0.861
Traes_5DL_46A3B0DAB1 Triticum aestivum Traes_5DL_46A3B0DAB1 I 0.852
TRIUR3_31795 Triticum urartu TRIUR3_31795 I 0.861
BRC2 Vitis vinifera VIT_01s0011g02920 I 0.914
TCP1 Vitis vinifera VIT_14s0083g00150 I 0.868
AC233950.1_FG002 Zea mays AC233950.1_FG002 I 0.858
GRMZM2G031905 Zea mays GRMZM2G031905 I 0.841
GRMZM2G062711 Zea mays GRMZM2G062711 I 0.833
GRMZM2G110242 Zea mays GRMZM2G110242 I 0.846