MTR_2g043020 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_2g043020 T002811_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.717 0.780
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.717 0.780
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.710 0.780
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.710 0.780
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AES65612 AP2 17 68

Links

Other AP2 family TFs
Other Medicago truncatula TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_2g043040 Medicago truncatula MTR_2g043040 I 0.774
MTR_2g043030 Medicago truncatula MTR_2g043030 I 0.774
Ca_19295 Cicer arietinum Ca_19295 I 0.773
Ca_19296 Cicer arietinum Ca_19296 I 0.767
MTR_2g043050 Medicago truncatula MTR_2g043050 I 0.762
GLYMA09G08330 Glycine max GLYMA09G08330 I 0.752
GLYMA15G19910 Glycine max GLYMA15G19910 I 0.752
Ca_19297 Cicer arietinum Ca_19297 I 0.747
GLYMA17G33535 Glycine max GLYMA17G33535 I 0.738
Ca_01683 Cicer arietinum Ca_01683 I 0.734
MTR_1g014820 Medicago truncatula MTR_1g014820 I 0.733
MTR_1g014860 Medicago truncatula MTR_1g014860 I 0.733
PGSC0003DMG400002899 Solanum tuberosum PGSC0003DMG400002899 I 0.732
Solyc12g009240.1 Solanum lycopersicum Solyc12g009240.1 I 0.732
GLYMA14G12505 Glycine max GLYMA14G12505 I 0.730
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.729
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.729
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.729
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.727
29739.m003716 Ricinus communis 29739.m003716 I 0.727
Pm027117 Prunus mume Pm027117 I 0.727
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.727
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.727
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.727
GLYMA17G05240 Glycine max GLYMA17G05240 I 0.726
Ca_09124 Cicer arietinum Ca_09124 I 0.726
Cagra.0402s0035 Capsella grandiflora Cagra.0402s0035 I 0.725
Bra003780 Brassica rapa Bra003780 I 0.725
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.725
Bo6g086740 Brassica oleracea Bo6g086740 I 0.725
Carubv10020965m.g Capsella rubella Carubv10020965m.g I 0.725
MTR_1g014800 Medicago truncatula MTR_1g014800 I 0.725
Bo8g068370 Brassica oleracea Bo8g068370 I 0.724
Bra016518 Brassica rapa Bra016518 I 0.724
GLYMA13G17250 Glycine max GLYMA13G17250 I 0.724
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.723
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.723
Bo8g102870 Brassica oleracea Bo8g102870 I 0.723
Bra031069 Brassica rapa Bra031069 I 0.723
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.720
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.720
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.719
TCM_037415 Theobroma cacao TCM_037415 I 0.719
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.719
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.717
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.717
mgf024162m Mimulus guttatus mgf024162m I 0.717
POPTR_0018s08320 Populus trichocarpa POPTR_0018s08320 I 0.717
ERF018 Arabidopsis thaliana AT1G74930 D 0.717
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.717
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.717
TCM_037486 Theobroma cacao TCM_037486 I 0.717
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.717
MDP0000649022 Malus domestica MDP0000649022 I 0.716
chr5.CM0040.40.nd Lotus japonicus chr5.CM0040.40.nd I 0.716
Bo6g119120 Brassica oleracea Bo6g119120 I 0.714
orange1.1g029068m.g Citrus sinensis orange1.1g029068m.g I 0.713
mgf021940m Mimulus guttatus mgf021940m I 0.713
Ciclev10009540m.g Citrus clementina Ciclev10009540m.g I 0.713
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.711
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.711
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.711
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.710
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.710
chr6.CM0420.30.nd Lotus japonicus chr6.CM0420.30.nd I 0.710
ERF017 Arabidopsis thaliana AT1G19210 D 0.710
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.710
29739.m003647 Ricinus communis 29739.m003647 I 0.709
Bra015882 Brassica rapa Bra015882 I 0.709
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.708
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.707
Cla011318 Citrullus lanatus Cla011318 I 0.707
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.707
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.707
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.706
Cla007584 Citrullus lanatus Cla007584 I 0.706
AMTR_s00007p00268280 Amborella trichopoda AMTR_s00007p00268280 I 0.706
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.706
Gorai.001G016800 Gossypium raimondii Gorai.001G016800 I 0.705
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.705
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.704
MDP0000704216 Malus domestica MDP0000704216 I 0.703
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.703
mgf025452m Mimulus guttatus mgf025452m I 0.702
Thhalv10019652m.g Eutrema salsugineum Thhalv10019652m.g I 0.700
Gorai.013G222700 Gossypium raimondii Gorai.013G222700 I 0.699
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.695
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.693
chr1.CM0133.1010.nc Lotus japonicus chr1.CM0133.1010.nc I 0.693
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.691
Si019636m.g Setaria italica Si019636m.g I 0.691
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.689
Bra025719 Brassica rapa Bra025719 I 0.687
Bostr.7128s0526 Boechera stricta Bostr.7128s0526 I 0.686
Cucsa.271180 Cucumis sativus Cucsa.271180 I 0.685
Bo3g015600 Brassica oleracea Bo3g015600 I 0.685
Bra006599 Brassica rapa Bra006599 I 0.685
Cla022291 Citrullus lanatus Cla022291 I 0.682
Cucsa.055920 Cucumis sativus Cucsa.055920 I 0.682
Carubv10001903m.g Capsella rubella Carubv10001903m.g I 0.680
Bo9g149820 Brassica oleracea Bo9g149820 I 0.680
Bostr.26527s0082 Boechera stricta Bostr.26527s0082 I 0.680
scaffold_602234.1 Arabidopsis lyrata scaffold_602234.1 I 0.680
Bra002377 Brassica rapa Bra002377 I 0.680