ENSORLG00000017089 (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000017089 T104965_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM6
M08277_2.00 		Homo sapiens
TTTTYYWBHHTTTYYHYTBYN
NRVARDRRAAADDVWRRAAAA		 ChIP-seq
Schmitges et al.(2016)
Q9NQX0.MEME 		0.818 0.978
PRDM6
M08855_2.00 		Homo sapiens
NNKTTTTCYYBYB
VRVRRGAAAAMNN		 Misc
Kulakovskiy et al.(2013)
PRDM6_HUMAN.H11MO.0.C 		0.818 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000021378 C2H2 ZF 91 111
ENSORLP00000021378 C2H2 ZF 119 141
ENSORLP00000021378 C2H2 ZF 147 169
ENSORLP00000021378 C2H2 ZF 175 196

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002635 Ricinus communis 30068.m002635 I
30206.m000769 Ricinus communis 30206.m000769 I
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I
AT-GTL1 Arabidopsis thaliana AT1G33240 D
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I
BGIOSGA005934 Oryza indica BGIOSGA005934 I
BGIOSGA014631 Oryza indica BGIOSGA014631 I
BGIOSGA031553 Oryza indica BGIOSGA031553 I
Bo6g049430 Brassica oleracea Bo6g049430 I
Bra040010 Brassica rapa Bra040010 I
BRADI1G77610 Brachypodium distachyon BRADI1G77610 I
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I
Carubv10008638m.g Capsella rubella Carubv10008638m.g I
cassava16854.m1 Manihot esculenta cassava16854.m1 I
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I
Cla005046 Citrullus lanatus Cla005046 I
Cucsa.193210 Cucumis sativus Cucsa.193210 I
evm.TU.supercontig_21.194 Carica papaya evm.TU.supercontig_21.194 I
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I
F775_26337 Aegilops tauschii F775_26337 I
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I
GRMZM2G016649 Zea mays GRMZM2G016649 I
GRMZM2G169580 Zea mays GRMZM2G169580 I
GRMZM2G414159 Zea mays GRMZM2G414159 I
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I
GSMUA_Achr1G04100_001 Musa acuminata GSMUA_Achr1G04100_001 I
GSMUA_Achr2G00580_001 Musa acuminata GSMUA_Achr2G00580_001 N
GSMUA_Achr4G24780_001 Musa acuminata GSMUA_Achr4G24780_001 I
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I
LPERR02G21190 Leersia perrieri LPERR02G21190 I
LPERR03G01010 Leersia perrieri LPERR03G01010 I
LPERR04G16420 Leersia perrieri LPERR04G16420 I
LPERR10G12070 Leersia perrieri LPERR10G12070 I
MDP0000156139 Malus domestica MDP0000156139 I
MDP0000451038 Malus domestica MDP0000451038 I
MDP0000451107 Malus domestica MDP0000451107 I
MDP0000701272 Malus domestica MDP0000701272 I
mgf004276m Mimulus guttatus mgf004276m I
MLOC_22988 Hordeum vulgare MLOC_22988 I
MLOC_70549 Hordeum vulgare MLOC_70549 I
MLOC_74813 Hordeum vulgare MLOC_74813 I
OB02G33250 Oryza brachyantha OB02G33250 I
OB04G27270 Oryza brachyantha OB04G27270 I
OBART02G25970 Oryza barthii OBART02G25970 I
OBART04G20290 Oryza barthii OBART04G20290 I
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I
OLONG_017894 Oryza longistaminata OLONG_017894 I
OMERI03G00890 Oryza meridionalis OMERI03G00890 I
OMERI10G12340 Oryza meridionalis OMERI10G12340 I
ONIVA03G01170 Oryza nivara ONIVA03G01170 I
ONIVA04G18520 Oryza nivara ONIVA04G18520 I
ONIVA05G15440 Oryza nivara ONIVA05G15440 I
ONIVA10G17310 Oryza nivara ONIVA10G17310 I
OPUNC02G23730 Oryza punctata OPUNC02G23730 I
OPUNC04G17930 Oryza punctata OPUNC04G17930 I
OPUNC10G14260 Oryza punctata OPUNC10G14260 I
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I
PGSC0003DMG400003964 Solanum tuberosum PGSC0003DMG400003964 N
Pm022572 Prunus mume Pm022572 I
Pm024289 Prunus mume Pm024289 I
POPTR_0001s31660 Populus trichocarpa POPTR_0001s31660 I
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I
SapurV1A.0066s0020 Salix purpurea SapurV1A.0066s0020 I
SapurV1A.0231s0350 Salix purpurea SapurV1A.0231s0350 I
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I
Sb01g017120 Sorghum bicolor Sb01g017120 I
Sb04g033390 Sorghum bicolor Sb04g033390 I
Sb06g023980 Sorghum bicolor Sb06g023980 I
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I
Si012121m.g Setaria italica Si012121m.g I
Si034382m.g Setaria italica Si034382m.g I
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I
TCM_015563 Theobroma cacao TCM_015563 I
TCM_035565 Theobroma cacao TCM_035565 I
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I
TRIUR3_33328 Triticum urartu TRIUR3_33328 I
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I