Ppa-nhr-120 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA00183 T305819_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.880 0.614
nhr-1
M00686_2.00 		Caenorhabditis elegans
ARTGATCA
TGATCAYT		 PBM
Narasimhan et al.(2015)
pTH9322 		0.796 0.586
CBG23380
M01296_2.00 		Caenorhabditis briggsae
NDBDHHANWN
NWNTDDHVHN		 PBM
Lambert et al.(2019)
pTH11449 		0.794 0.600
nhr-154
M00698_2.00 		Caenorhabditis elegans
NRBRYCAHWD
HWDTGRYVYN		 PBM
Narasimhan et al.(2015)
pTH10650 		0.793 0.586
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA00183 Nuclear receptor 43 112

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.881
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.847
ACOC_0000048701 Angiostrongylus costaricensis ACOC_0000048701 I 0.803
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.788
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.797
ALUE_0001920701 Ascaris lumbricoides ALUE_0001920701 N 0.836
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.805
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.947
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.808
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.808
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.797
ANCCAN_24419 Ancylostoma caninum ANCCAN_24419 I 0.803
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.926
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.796
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.797
ASIM_0001238601 Anisakis simplex ASIM_0001238601 N 0.757
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.751
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.961
ASU_02770 Ascaris suum ASU_02770 I 0.838
ASU_03657 Ascaris suum ASU_03657 I 0.942
ASU_03870 Ascaris suum ASU_03870 I 0.880
ASU_10584 Ascaris suum ASU_10584 I 0.756
ASU_12501 Ascaris suum ASU_12501 I 0.805
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.838
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.813
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.813
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.820
Bm4980 Brugia malayi Bm4980 I 0.867
Bm5319 Brugia malayi Bm5319 I 0.789
Bm5520 Brugia malayi Bm5520 I 0.813
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.867
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.932
BTMF_0001127801 Brugia timori BTMF_0001127801 I 0.813
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.789
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.775
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.888
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.811
BXY_0988800 Bursaphelenchus xylophilus BXY_0988800 I 0.843
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.875
CBG00093 Caenorhabditis briggsae CBG00093 I 0.784
CBG01866 Caenorhabditis briggsae CBG01866 I 0.796
CBG02077 Caenorhabditis briggsae CBG02077 I 0.803
CBG03844 Caenorhabditis briggsae CBG03844 I 0.880
CBG09380 Caenorhabditis briggsae CBG09380 I 0.793
CBG10855 Caenorhabditis briggsae CBG10855 I 0.969
CBG10857 Caenorhabditis briggsae CBG10857 I 0.959
CBG16594 Caenorhabditis briggsae CBG16594 I 0.777
CBG23318 Caenorhabditis briggsae CBG23318 I 0.868
CBG23319 Caenorhabditis briggsae CBG23319 I 0.864
CBG23380 Caenorhabditis briggsae CBG23380 D 0.794
CBG23381 Caenorhabditis briggsae CBG23381 I 0.748
CBN07240 Caenorhabditis brenneri CBN07240 I 0.785
CBN18198 Caenorhabditis brenneri CBN18198 I 0.880
CBN19235 Caenorhabditis brenneri CBN19235 I 0.796
CBN20518 Caenorhabditis brenneri CBN20518 I 0.777
CBN20749 Caenorhabditis brenneri CBN20749 I 0.880
CBN21115 Caenorhabditis brenneri CBN21115 I 0.803
CBN24827 Caenorhabditis brenneri CBN24827 I 0.969
CBN28497 Caenorhabditis brenneri CBN28497 I 0.794
CBN30215 Caenorhabditis brenneri CBN30215 I 0.858
CJA00680 Caenorhabditis japonica CJA00680 I 0.945
CJA01292 Caenorhabditis japonica CJA01292 I 0.846
CJA06153 Caenorhabditis japonica CJA06153 I 0.784
CJA08896 Caenorhabditis japonica CJA08896 I 0.969
CJA13458 Caenorhabditis japonica CJA13458 I 0.796
CJA37776 Caenorhabditis japonica CJA37776 I 0.836
CJA41479 Caenorhabditis japonica CJA41479 I 0.781
CRE00149 Caenorhabditis remanei CRE00149 I 0.972
CRE00606 Caenorhabditis remanei CRE00606 I 0.959
CRE03310 Caenorhabditis remanei CRE03310 I 0.796
CRE07549 Caenorhabditis remanei CRE07549 I 0.803
CRE08259 Caenorhabditis remanei CRE08259 I 0.880
CRE24074 Caenorhabditis remanei CRE24074 I 0.784
CRE25378 Caenorhabditis remanei CRE25378 I 0.780
CRE26981 Caenorhabditis remanei CRE26981 I 0.893
CRE26982 Caenorhabditis remanei CRE26982 I 0.866
CRE27050 Caenorhabditis remanei CRE27050 I 0.794
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.881
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.788
DICVIV_12420 Dictyocaulus viviparus DICVIV_12420 I 0.803
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.797
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.867
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.789
DME_0001010101 Dracunculus medinensis DME_0001010101 I 0.813
EEL_0000987201 Elaeophora elaphi EEL_0000987201 I 0.813
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.931
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.795
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.838
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.839
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.881
GPLIN_000694800 Globodera pallida GPLIN_000694800 N 0.799
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.881
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.865
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.797
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.824
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.881
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.955
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.947
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.796
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.921
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.796
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.953
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.824
HPLM_0000769401 Haemonchus placei HPLM_0000769401 I 0.955
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.910
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.760
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.792
L596_g14199 Steinernema carpocapsae L596_g14199 I 0.839
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.756
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.806
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.927
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.970
L596_g702 Steinernema carpocapsae L596_g702 I 0.803
L889_g1557 Steinernema feltiae L889_g1557 I 0.963
L889_g17247 Steinernema feltiae L889_g17247 I 0.910
L889_g1891 Steinernema feltiae L889_g1891 I 0.962
L889_g22425 Steinernema feltiae L889_g22425 N 0.856
L889_g22901 Steinernema feltiae L889_g22901 I 0.756
L889_g29879 Steinernema feltiae L889_g29879 I 0.792
L889_g7780 Steinernema feltiae L889_g7780 I 0.760
L889_g8914 Steinernema feltiae L889_g8914 I 0.804
L892_g17612 Steinernema scapterisci L892_g17612 I 0.976
L892_g2422 Steinernema scapterisci L892_g2422 I 0.839
L892_g4169 Steinernema scapterisci L892_g4169 I 0.975
L892_g5067 Steinernema scapterisci L892_g5067 I 0.803
L892_g5079 Steinernema scapterisci L892_g5079 I 0.756
L892_g8671 Steinernema scapterisci L892_g8671 I 0.760
L893_g13285 Steinernema glaseri L893_g13285 I 0.911
L893_g15045 Steinernema glaseri L893_g15045 I 0.783
L893_g15276 Steinernema glaseri L893_g15276 I 0.756
L893_g22683 Steinernema glaseri L893_g22683 I 0.808
L893_g25227 Steinernema glaseri L893_g25227 I 0.806
L893_g28857 Steinernema glaseri L893_g28857 I 0.966
L893_g3010 Steinernema glaseri L893_g3010 I 0.792
L893_g3565 Steinernema glaseri L893_g3565 I 0.976
L898_g22454 Steinernema monticolum L898_g22454 I 0.760
L898_g26357 Steinernema monticolum L898_g26357 I 0.910
L898_g2764 Steinernema monticolum L898_g2764 I 0.792
L898_g30390 Steinernema monticolum L898_g30390 I 0.813
L898_g8573 Steinernema monticolum L898_g8573 I 0.756
L898_g9866 Steinernema monticolum L898_g9866 I 0.963
LOAG_00300 Loa loa LOAG_00300 I 0.789
LOAG_03407 Loa loa LOAG_03407 I 0.813
LOAG_08615 Loa loa LOAG_08615 I 0.880
LOAG_16377 Loa loa LOAG_16377 I 0.932
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.779
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.813
nAv.1.0.1.g02923 Acanthocheilonema viteae nAv.1.0.1.g02923 I 0.813
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.789
NECAME_00872 Necator americanus NECAME_00872 I 0.805
NECAME_01070 Necator americanus NECAME_01070 I 0.797
NECAME_01944 Necator americanus NECAME_01944 I 0.955
NECAME_06702 Necator americanus NECAME_06702 I 0.764
NECAME_08394 Necator americanus NECAME_08394 I 0.960
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.796
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.798
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.884
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.969
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.793
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.784
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.959
nhr-40 Caenorhabditis elegans WBGene00003630 I 0.785
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.880
nhr-68 Caenorhabditis elegans WBGene00003658 I 0.868
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.789
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.874
nOo.2.0.1.g03355 Onchocerca ochengi nOo.2.0.1.g03355 I 0.813
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.789
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.880
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.942
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.753
PPA06637 Pristionchus pacificus PPA06637 I 0.863
PPA10975 Pristionchus pacificus PPA10975 N 0.760
PPA16374 Pristionchus pacificus PPA16374 I 0.792
PPA20196 Pristionchus pacificus PPA20196 I 0.785
PPA21777 Pristionchus pacificus PPA21777 I 0.949
PPA24481 Pristionchus pacificus PPA24481 I 0.883
PPA29597 Pristionchus pacificus PPA29597 I 0.897
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.850
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.851
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.871
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.874
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.856
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.811
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.802
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.847
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.753
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.859
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.785
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.992
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.753
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.887
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.964
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.883
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.869
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.992
scaffold584-EXSNAP2012.2 Pristionchus exspectatus scaffold584-EXSNAP2012.2 I 0.815
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.854
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.910
scaffold726-EXSNAP2012.5 Pristionchus exspectatus scaffold726-EXSNAP2012.5 I 0.815
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.859
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.770
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.756
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.838
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.795
SMUV_0000795201 Syphacia muris SMUV_0000795201 I 0.816
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.883
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.806
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.851
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.856
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.856
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.874
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.874
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.850
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.874
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.851
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.830
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.874
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.856
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.850
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.850
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.874
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.874
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.856
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.851
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.806
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.839
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.789
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.882
TELCIR_00491 Teladorsagia circumcincta TELCIR_00491 I 0.803
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.874
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.930
WBGene00240723 Onchocerca volvulus WBGene00240723 I 0.813
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.792
WUBG_08038 Wuchereria bancrofti WUBG_08038 I 0.813