CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000147667
(
Malus domestica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00319 (SRF-TF)
IPR002100
MDP0000147667
T258658_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL65
M10901_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AGL65_01
0.783
0.783
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000147667
MADS box
91
136
RLENTNGRQATYAKRKNGIMKKANELSILCDIDIVLLMFSPTGKPS
Links
Other
MADS box
family TFs
Other
Malus domestica
TFs
95 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000773068
Malus domestica
MDP0000773068
I
1.000
MDP0000146415
Malus domestica
MDP0000146415
I
1.000
MDP0000919323
Malus domestica
MDP0000919323
I
1.000
PRUPE_ppa017562mg
Prunus persica
PRUPE_ppa017562mg
I
0.978
Pm006479
Prunus mume
Pm006479
I
0.978
MDP0000146231
Malus domestica
MDP0000146231
I
0.978
Ciclev10031963m.g
Citrus clementina
Ciclev10031963m.g
I
0.935
MTR_5g041650
Medicago truncatula
MTR_5g041650
I
0.935
POPTR_0008s08780
Populus trichocarpa
POPTR_0008s08780
I
0.935
orange1.1g018825m.g
Citrus sinensis
orange1.1g018825m.g
I
0.935
Ca_18082
Cicer arietinum
Ca_18082
I
0.935
PK03147.1
Cannabis sativa
PK03147.1
I
0.935
SapurV1A.0458s0040
Salix purpurea
SapurV1A.0458s0040
I
0.935
Ca_16376
Cicer arietinum
Ca_16376
I
0.913
POPTR_0010s17450
Populus trichocarpa
POPTR_0010s17450
N
0.913
Cla010361
Citrullus lanatus
Cla010361
I
0.913
evm.TU.supercontig_1.45
Carica papaya
evm.TU.supercontig_1.45
N
0.913
SapurV1A.0149s0010
Salix purpurea
SapurV1A.0149s0010
N
0.913
LjSGA_031058.2
Lotus japonicus
LjSGA_031058.2
I
0.913
GLYMA07G35610
Glycine max
GLYMA07G35610
N
0.891
TCM_011687
Theobroma cacao
TCM_011687
I
0.891
Lus10030450.g
Linum usitatissimum
Lus10030450.g
I
0.870
Lus10026613.g
Linum usitatissimum
Lus10026613.g
I
0.870
AGL30
Arabidopsis thaliana
AT2G03060
I
0.870
29813.m001508
Ricinus communis
29813.m001508
I
0.870
Bo9g072860
Brassica oleracea
Bo9g072860
N
0.870
cassava17346.m1
Manihot esculenta
cassava17346.m1
I
0.870
Gorai.005G142100
Gossypium raimondii
Gorai.005G142100
N
0.870
GLYMA20G04500
Glycine max
GLYMA20G04500
N
0.870
Cucsa.284960
Cucumis sativus
Cucsa.284960
I
0.870
Gorai.013G086600
Gossypium raimondii
Gorai.013G086600
N
0.851
Thhalv10004409m.g
Eutrema salsugineum
Thhalv10004409m.g
I
0.848
Carubv10017440m.g
Capsella rubella
Carubv10017440m.g
I
0.848
Cagra.0534s0009
Capsella grandiflora
Cagra.0534s0009
I
0.848
Bostr.10273s0411
Boechera stricta
Bostr.10273s0411
I
0.848
Bostr.0556s0119
Boechera stricta
Bostr.0556s0119
I
0.848
cassava12018.valid.m1
Manihot esculenta
cassava12018.valid.m1
I
0.848
Bo7g080890
Brassica oleracea
Bo7g080890
I
0.848
AGL30
Arabidopsis lyrata
Al_scaffold_0005_228
I
0.848
Bra017404
Brassica rapa
Bra017404
I
0.848
Bra024792
Brassica rapa
Bra024792
I
0.848
GLYMA02G12131
Glycine max
GLYMA02G12131
N
0.826
AMTR_s00010p00264750
Amborella trichopoda
AMTR_s00010p00264750
I
0.804
Lus10037166.g
Linum usitatissimum
Lus10037166.g
N
0.804
Bo6g109050
Brassica oleracea
Bo6g109050
I
0.804
Bra004393
Brassica rapa
Bra004393
I
0.804
Aquca_002_00641
Aquilegia coerulea
Aquca_002_00641
I
0.804
PDK_20s1352301g001
Phoenix dactylifera
PDK_20s1352301g001
I
0.787
Cagra.0887s0001
Capsella grandiflora
Cagra.0887s0001
I
0.783
Lus10036761.g
Linum usitatissimum
Lus10036761.g
N
0.783
Carubv10020210m.g
Capsella rubella
Carubv10020210m.g
I
0.783
Bra031049
Brassica rapa
Bra031049
I
0.771
Bra016544
Brassica rapa
Bra016544
I
0.771
Bo8g104060
Brassica oleracea
Bo8g104060
I
0.771
Bo8g068060
Brassica oleracea
Bo8g068060
I
0.771
AGL94
Arabidopsis lyrata
Al_scaffold_0002_1615
N
0.766
Bra025685
Brassica rapa
Bra025685
I
0.766
AGL94
Arabidopsis thaliana
AT1G69540
N
0.761
Sb05g025970
Sorghum bicolor
Sb05g025970
I
0.761
AGL65
Arabidopsis thaliana
AT1G18750
D
0.750
Gorai.001G074200
Gossypium raimondii
Gorai.001G074200
I
0.750
30138.m004061
Ricinus communis
30138.m004061
I
0.750
Bostr.7128s0485
Boechera stricta
Bostr.7128s0485
I
0.750
Cagra.4153s0004
Capsella grandiflora
Cagra.4153s0004
I
0.750
Thhalv10007954m.g
Eutrema salsugineum
Thhalv10007954m.g
I
0.750
Carubv10009419m.g
Capsella rubella
Carubv10009419m.g
I
0.750
Thhalv10018691m.g
Eutrema salsugineum
Thhalv10018691m.g
I
0.739
PDK_20s1342861g001
Phoenix dactylifera
PDK_20s1342861g001
I
0.739
MTR_4g108720
Medicago truncatula
MTR_4g108720
I
0.739
GSMUA_Achr3G24170_001
Musa acuminata
GSMUA_Achr3G24170_001
I
0.739
AGL65
Arabidopsis lyrata
fgenesh2_kg.1__2055__AT1G18750.1
I
0.729
orange1.1g017511m.g
Citrus sinensis
orange1.1g017511m.g
I
0.729
cassava46162.m1
Manihot esculenta
cassava46162.m1
I
0.729
Cla018884
Citrullus lanatus
Cla018884
I
0.729
Ciclev10020575m.g
Citrus clementina
Ciclev10020575m.g
I
0.729
Lus10019089.g
Linum usitatissimum
Lus10019089.g
I
0.729
cassava19791.m1
Manihot esculenta
cassava19791.m1
I
0.729
Cucsa.112840
Cucumis sativus
Cucsa.112840
I
0.729
GSMUA_Achr2G01740_001
Musa acuminata
GSMUA_Achr2G01740_001
I
0.723
F775_13266
Aegilops tauschii
F775_13266
I
0.717
GLYMA17G10941
Glycine max
GLYMA17G10941
I
0.717
GRMZM2G441115
Zea mays
GRMZM2G441115
I
0.717
Thhalv10019726m.g
Eutrema salsugineum
Thhalv10019726m.g
I
0.717
GSMUA_Achr11G14240_001
Musa acuminata
GSMUA_Achr11G14240_001
N
0.717
TRIUR3_33223
Triticum urartu
TRIUR3_33223
I
0.717
Traes_4BS_8B4AFA7C2
Triticum aestivum
Traes_4BS_8B4AFA7C2
I
0.717
Traes_4DS_4C4EB1D21
Triticum aestivum
Traes_4DS_4C4EB1D21
I
0.717
Traes_4AL_8DBE120BC
Triticum aestivum
Traes_4AL_8DBE120BC
I
0.717
PK21701.1
Cannabis sativa
PK21701.1
I
0.708
Eucgr.B00522
Eucalyptus grandis
Eucgr.B00522
I
0.708
AGL65
Vitis vinifera
VIT_17s0000g06340
I
0.708
TCM_014051
Theobroma cacao
TCM_014051
I
0.708
Pavir.Hb00170
Panicum virgatum
Pavir.Hb00170
I
0.702
chr4.CM0087.920.nd
Lotus japonicus
chr4.CM0087.920.nd
I
0.702
Pavir.J04162
Panicum virgatum
Pavir.J04162
I
0.702