ENSP00000388910-D1 (Bos grunniens)
Rel

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00554 (RHD_DNA_bind) IPR011539 ENSP00000388910-D1 T317778_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFATC4
M01306_2.00 		Homo sapiens
NNNWWWVYRN
NYRBWWWNNN		 PBM
Lambert et al.(2019)
pTH9347 		0.986 0.986
NFATC4
M05701_2.00 		Homo sapiens
DBTTTCCRYN
NRYGGAAAVH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_1 		0.986 0.986
NFATC4
M05702_2.00 		Homo sapiens
NKTTCCATGGAAMV
BKTTCCATGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_HT-SELEX_2 		0.986 0.986
NFATC4
M09345_2.00 		Homo sapiens
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_HUMAN.H11MO.0.C 		0.986 0.986
Nfatc4
M09354_2.00 		Mus musculus
HNDBTTTCCN
NGGAAAVHND		 Misc
Kulakovskiy et al.(2013)
NFAC4_MOUSE.H11MO.0.C 		0.986 0.986
NFATC4
M11219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3_01 		0.986 0.986
NFATC4
M11220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT3_Q3 		0.986 0.986
NFATC4
M05703_2.00 		Homo sapiens
DNTTTCCRYN
NRYGGAAANH		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_1 		0.986 0.986
NFATC4
M05704_2.00 		Homo sapiens
NKTTCCRYGGAAMN
NKTTCCRYGGAAMN		 SELEX
Yin et al.(2017)
NFATC4_eDBD_Methyl-HT-SELEX_2 		0.986 0.986
Nfatc3
M09359_2.00 		Mus musculus
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_MOUSE.H11MO.0.B 		0.867 0.867
NFATC3
M02440_2.00 		Homo sapiens
DNTTTCCRNN
NNYGGAAANH		 PBM
Weirauch et al.(2014)
pTH9192 		0.860 0.860
NFATC3
M05693_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_1 		0.860 0.860
NFATC3
M05694_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_2 		0.860 0.860
NFATC3
M05695_2.00 		Homo sapiens
DYGGAAANNNNNNNTTTCCRH
DYGGAAANNNNNNNTTTCCRH		 SELEX
Yin et al.(2017)
NFATC3_eDBD_HT-SELEX_3 		0.860 0.860
NFATC3
M09343_2.00 		Homo sapiens
RDTTTTCCA
TGGAAAAHY		 Misc
Kulakovskiy et al.(2013)
NFAC3_HUMAN.H11MO.0.B 		0.860 0.860
NFATC3
M11217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q3 		0.860 0.860
NFATC3
M11218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT4_Q5 		0.860 0.860
NFATC3
M05696_2.00 		Homo sapiens
WNTTTCCRYN
NRYGGAAANW		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_1 		0.860 0.860
NFATC3
M05697_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_2 		0.860 0.860
NFATC3
M05698_2.00 		Homo sapiens
RYGGAAANHNNNDNTTTCCRY
RYGGAAANHNNNDNTTTCCRY		 SELEX
Yin et al.(2017)
NFATC3_eDBD_Methyl-HT-SELEX_3 		0.860 0.860
NFATC2
M02441_2.00 		Homo sapiens
WNTTTCCRHN
NDYGGAAANW		 PBM
Weirauch et al.(2014)
pTH9196 		0.818 0.818
NFATC2
M05705_2.00 		Homo sapiens
DTTTCCATGGAAAM
KTTTCCATGGAAAH		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_1 		0.818 0.818
NFATC2
M05706_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_HT-SELEX_2 		0.818 0.818
NFATC2
M09346_2.00 		Homo sapiens
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_HUMAN.H11MO.0.B 		0.818 0.818
Nfatc2
M09357_2.00 		Mus musculus
NWTTTTCCW
WGGAAAAWN		 Misc
Kulakovskiy et al.(2013)
NFAC2_MOUSE.H11MO.0.C 		0.818 0.818
NFATC2
M11221_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q4 		0.818 0.818
NFATC2
M11222_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q5 		0.818 0.818
NFATC2
M11223_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT1_Q6 		0.818 0.818
NFATC2
M08462_2.00 		Homo sapiens
TTTTCCA
TGGAAAA		 COMPILED
Mathelier et al.(2014)
MA0152.1 		0.818 0.818
NFATC2
M05707_2.00 		Homo sapiens
NTTTCCGCGGAAAN
NTTTCCGCGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_1 		0.818 0.818
NFATC2
M05708_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC2_eDBD_Methyl-HT-SELEX_2 		0.818 0.818
NFATC1
M02443_2.00 		Meleagris gallopavo
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8315 		0.811 0.811
Nfatc1
M09360_2.00 		Mus musculus
KABTCANWBTTTCCW
WGGAAAVWNTGAVTM		 Misc
Kulakovskiy et al.(2013)
NFAC1_MOUSE.H11MO.0.A 		0.811 0.811
NFATC1
M02444_2.00 		Monodelphis domestica
NNDTTCCDNN
NNHGGAAHNN		 PBM
Weirauch et al.(2014)
pTH8401 		0.804 0.804
nfatc1
M02446_2.00 		Xenopus tropicalis
NNTTTCCRNN
NNYGGAAANN		 PBM
Weirauch et al.(2014)
pTH8557 		0.797 0.797
NFATC1
M03449_2.00 		Homo sapiens
HKGRAAADDNWBTTTCCAYN
NRTGGAAAVWNHHTTTYCMD		 SELEX
Jolma et al.(2013)
NFATC1_1 		0.797 0.797
NFATC1
M03450_2.00 		Homo sapiens
TTTCCAYWRYGGAAA
TTTCCRYWRTGGAAA		 SELEX
Jolma et al.(2013)
NFATC1_2 		0.797 0.797
NFATC1
M03451_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Jolma et al.(2013)
NFATC1_3 		0.797 0.797
NFATC1
M02747_2.00 		Homo sapiens
DTTCCRYGGAA
TTCCRYGGAAH		 SELEX
Jolma et al.(2010)
NFATc1_dimer 		0.797 0.797
NFATC1
M02748_2.00 		Homo sapiens
GGAANDTTCC
GGAAHNTTCC		 SELEX
Jolma et al.(2010)
NFATc1_dimer_type2 		0.797 0.797
NFATC1
M02749_2.00 		Homo sapiens
WDTTTCCAY
RTGGAAAHW		 SELEX
Jolma et al.(2010)
NFATc1_monomer 		0.797 0.797
NFATC1
M05711_2.00 		Homo sapiens
NTTTCCATGGAAAN
NTTTCCATGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_1 		0.797 0.797
NFATC1
M05712_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_HT-SELEX_2 		0.797 0.797
NFATC1
M09349_2.00 		Homo sapiens
HBYHWBWBTTTCCWB
VWGGAAAVWVWDRVD		 Misc
Kulakovskiy et al.(2013)
NFAC1_HUMAN.H11MO.0.B 		0.797 0.797
NFATC1
M09625_2.00 		Homo sapiens
WBTTTCCAYY
RRTGGAAAVW		 Misc
Heinz et al.(2010)
Jurkat-NFATC1_Jolma_et_al. 		0.797 0.797
NFATC1
M11232_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q4 		0.797 0.797
NFATC1
M11233_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5_01 		0.797 0.797
NFATC1
M11234_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFAT2_Q5 		0.797 0.797
NFATC1
M05713_2.00 		Homo sapiens
NTTTCCRYGGAAAN
NTTTCCRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_1 		0.797 0.797
NFATC1
M05714_2.00 		Homo sapiens
NTTTCCRYNNRYGGAAAN
NTTTCCRYNNRYGGAAAN		 SELEX
Yin et al.(2017)
NFATC1_eDBD_Methyl-HT-SELEX_2 		0.797 0.797
ENSTNIG00000018271
M02445_2.00 		Tetraodon nigroviridis
DNDTTCCRNN
NNYGGAAHNH		 PBM
Weirauch et al.(2014)
pTH9005 		0.720 0.720
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSP00000388910-D1 Rel 433 592

Links

Other Rel family TFs
Other Bos grunniens TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30147.m014313 Ricinus communis 30147.m014313 I 0.000
30190.m011119 Ricinus communis 30190.m011119 I 0.000
30190.m011120 Ricinus communis 30190.m011120 I 0.000
60638.m00016 Ricinus communis 60638.m00016 I 0.000
Aquca_012_00144 Aquilegia coerulea Aquca_012_00144 I 0.000
Aquca_013_00435 Aquilegia coerulea Aquca_013_00435 I 0.000
Aquca_013_00436 Aquilegia coerulea Aquca_013_00436 I 0.000
DREB1F Arabidopsis thaliana AT1G12610 D 0.000
DREB1C Arabidopsis thaliana AT4G25470 D 0.000
DREB1A Arabidopsis thaliana AT4G25480 D 0.000
DREB1D Arabidopsis thaliana AT5G51990 D 0.000
DREB1G Oryza indica BGIOSGA008804 I 0.000
DREB1E Oryza indica BGIOSGA016950 I 0.000
Bo01335s010 Brassica oleracea Bo01335s010 I 0.000
Bo8g108050 Brassica oleracea Bo8g108050 I 0.000
Bo9g104770 Brassica oleracea Bo9g104770 I 0.000
Bostr.15774s0346 Boechera stricta Bostr.15774s0346 I 0.000
Bostr.7867s0359 Boechera stricta Bostr.7867s0359 I 0.000
Bostr.7867s0360 Boechera stricta Bostr.7867s0360 I 0.000
Bostr.7867s0361 Boechera stricta Bostr.7867s0361 I 0.000
Bra016763 Brassica rapa Bra016763 I 0.000
Bra026963 Brassica rapa Bra026963 I 0.000
Bra028290 Brassica rapa Bra028290 I 0.000
BRADI3G51630 Brachypodium distachyon BRADI3G51630 I 0.000
Cagra.0094s0011 Capsella grandiflora Cagra.0094s0011 I 0.000
Cagra.0568s0171 Capsella grandiflora Cagra.0568s0171 I 0.000
Cagra.2248s0026 Capsella grandiflora Cagra.2248s0026 I 0.000
Cagra.28753s0001 Capsella grandiflora Cagra.28753s0001 I 0.000
Carubv10005709m.g Capsella rubella Carubv10005709m.g I 0.000
Carubv10006965m.g Capsella rubella Carubv10006965m.g I 0.000
Carubv10010303m.g Capsella rubella Carubv10010303m.g I 0.000
Carubv10027759m.g Capsella rubella Carubv10027759m.g I 0.000
cassava17064.m1 Manihot esculenta cassava17064.m1 I 0.000
cassava18935.valid.m1 Manihot esculenta cassava18935.valid.m1 I 0.000
cassava35062.m1 Manihot esculenta cassava35062.m1 I 0.000
cassava41192.m1 Manihot esculenta cassava41192.m1 I 0.000
Ciclev10007068m.g Citrus clementina Ciclev10007068m.g I 0.000
Ciclev10021923m.g Citrus clementina Ciclev10021923m.g I 0.000
Cla002362 Citrullus lanatus Cla002362 I 0.000
Cla006315 Citrullus lanatus Cla006315 I 0.000
Cla011674 Citrullus lanatus Cla011674 I 0.000
Cucsa.166340 Cucumis sativus Cucsa.166340 I 0.000
Cucsa.251030 Cucumis sativus Cucsa.251030 I 0.000
Cucsa.302750 Cucumis sativus Cucsa.302750 I 0.000
Eucgr.A02818 Eucalyptus grandis Eucgr.A02818 I 0.000
Eucgr.D01925 Eucalyptus grandis Eucgr.D01925 I 0.000
Eucgr.E00529 Eucalyptus grandis Eucgr.E00529 I 0.000
evm.TU.supercontig_5.66 Carica papaya evm.TU.supercontig_5.66 I 0.000
evm.TU.supercontig_74.84 Carica papaya evm.TU.supercontig_74.84 I 0.000
DDF1 Arabidopsis lyrata fgenesh2_kg.1__1363__AT1G12610.1 D 0.000
CBF2 Arabidopsis lyrata fgenesh2_kg.7__1712__AT4G25470.1 I 0.000
gene13329-v1.0-hybrid Fragaria vesca gene13329-v1.0-hybrid I 0.000
gene32378-v1.0-hybrid Fragaria vesca gene32378-v1.0-hybrid I 0.000
GLYMA09G27180 Glycine max GLYMA09G27180 I 0.000
GLYMA10G38440 Glycine max GLYMA10G38440 I 0.000
GLYMA12G30740 Glycine max GLYMA12G30740 I 0.000
GLYMA20G29410 Glycine max GLYMA20G29410 I 0.000
Gorai.006G046200 Gossypium raimondii Gorai.006G046200 I 0.000
Gorai.007G010100 Gossypium raimondii Gorai.007G010100 I 0.000
Gorai.008G243600 Gossypium raimondii Gorai.008G243600 I 0.000
Gorai.008G280600 Gossypium raimondii Gorai.008G280600 I 0.000
GRMZM2G042756 Zea mays GRMZM2G042756 I 0.000
GRMZM2G137341 Zea mays GRMZM2G137341 I 0.000
GSMUA_Achr11G21630_001 Musa acuminata GSMUA_Achr11G21630_001 I 0.000
GSMUA_Achr8G11980_001 Musa acuminata GSMUA_Achr8G11980_001 I 0.000
LjSGA_037211.1 Lotus japonicus LjSGA_037211.1 I 0.000
LPERR02G22610 Leersia perrieri LPERR02G22610 I 0.000
LPERR04G18190 Leersia perrieri LPERR04G18190 I 0.000
Lus10001871.g Linum usitatissimum Lus10001871.g I 0.000
Lus10006332.g Linum usitatissimum Lus10006332.g I 0.000
Lus10006334.g Linum usitatissimum Lus10006334.g I 0.000
Lus10029601.g Linum usitatissimum Lus10029601.g I 0.000
Lus10029602.g Linum usitatissimum Lus10029602.g I 0.000
MDP0000154764 Malus domestica MDP0000154764 I 0.000
MDP0000198054 Malus domestica MDP0000198054 I 0.000
mgf017136m Mimulus guttatus mgf017136m I 0.000
mgf019061m Mimulus guttatus mgf019061m I 0.000
mgf026339m Mimulus guttatus mgf026339m I 0.000
mgf026642m Mimulus guttatus mgf026642m I 0.000
MLOC_75886 Hordeum vulgare MLOC_75886 I 0.000
MTR_6g465420 Medicago truncatula MTR_6g465420 I 0.000
MTR_6g465430 Medicago truncatula MTR_6g465430 I 0.000
MTR_6g465450 Medicago truncatula MTR_6g465450 I 0.000
MTR_6g465460 Medicago truncatula MTR_6g465460 I 0.000
MTR_6g465510 Medicago truncatula MTR_6g465510 I 0.000
MTR_6g465530 Medicago truncatula MTR_6g465530 I 0.000
MTR_6g465690 Medicago truncatula MTR_6g465690 I 0.000
MTR_6g466000 Medicago truncatula MTR_6g466000 I 0.000
MTR_6g466130 Medicago truncatula MTR_6g466130 I 0.000
OBART02G27760 Oryza barthii OBART02G27760 I 0.000
OBART04G22220 Oryza barthii OBART04G22220 I 0.000
OGLUM02G28340 Oryza glumaepatula OGLUM02G28340 I 0.000
OGLUM04G22260 Oryza glumaepatula OGLUM04G22260 I 0.000
OMERI02G26980 Oryza meridionalis OMERI02G26980 I 0.000
OMERI04G18770 Oryza meridionalis OMERI04G18770 I 0.000
ONIVA02G30790 Oryza nivara ONIVA02G30790 I 0.000
ONIVA04G20840 Oryza nivara ONIVA04G20840 I 0.000
OPUNC04G19970 Oryza punctata OPUNC04G19970 I 0.000
orange1.1g028094m.g Citrus sinensis orange1.1g028094m.g I 0.000
ORGLA04G0192900 Oryza glaberrima ORGLA04G0192900 I 0.000
ORUFI02G29230 Oryza rufipogon ORUFI02G29230 I 0.000
ORUFI04G23890 Oryza rufipogon ORUFI04G23890 I 0.000
DREB1G Oryza sativa OS02G0677300 D 0.000
DREB1E Oryza sativa OS04G0572400 D 0.000
Pavir.Aa00912 Panicum virgatum Pavir.Aa00912 I 0.000
Pavir.Ab02685 Panicum virgatum Pavir.Ab02685 I 0.000
Pavir.Ga00931 Panicum virgatum Pavir.Ga00931 I 0.000
PGSC0003DMG400012524 Solanum tuberosum PGSC0003DMG400012524 I 0.000
PGSC0003DMG400012525 Solanum tuberosum PGSC0003DMG400012525 I 0.000
PGSC0003DMG400014309 Solanum tuberosum PGSC0003DMG400014309 I 0.000
PGSC0003DMG400014310 Solanum tuberosum PGSC0003DMG400014310 I 0.000
PGSC0003DMG400014311 Solanum tuberosum PGSC0003DMG400014311 I 0.000
PK23332.1 Cannabis sativa PK23332.1 I 0.000
Pm023769 Prunus mume Pm023769 I 0.000
Pm023772 Prunus mume Pm023772 I 0.000
Pm023775 Prunus mume Pm023775 I 0.000
POPTR_0001s08710 Populus trichocarpa POPTR_0001s08710 I 0.000
POPTR_0001s08720 Populus trichocarpa POPTR_0001s08720 I 0.000
POPTR_0004s19820 Populus trichocarpa POPTR_0004s19820 I 0.000
POPTR_0009s14990 Populus trichocarpa POPTR_0009s14990 I 0.000
POPTR_0012s13870 Populus trichocarpa POPTR_0012s13870 I 0.000
POPTR_0015s13830 Populus trichocarpa POPTR_0015s13830 I 0.000
PRUPE_ppa010800mg Prunus persica PRUPE_ppa010800mg I 0.000
PRUPE_ppa010909mg Prunus persica PRUPE_ppa010909mg I 0.000
PRUPE_ppa010935mg Prunus persica PRUPE_ppa010935mg I 0.000
PRUPE_ppa021197mg Prunus persica PRUPE_ppa021197mg I 0.000
SapurV1A.0045s0710 Salix purpurea SapurV1A.0045s0710 I 0.000
SapurV1A.0068s0560 Salix purpurea SapurV1A.0068s0560 I 0.000
SapurV1A.0219s0320 Salix purpurea SapurV1A.0219s0320 I 0.000
SapurV1A.0282s0070 Salix purpurea SapurV1A.0282s0070 I 0.000
SapurV1A.0282s0080 Salix purpurea SapurV1A.0282s0080 I 0.000
SapurV1A.0400s0160 Salix purpurea SapurV1A.0400s0160 I 0.000
Sb04g031950 Sorghum bicolor Sb04g031950 I 0.000
Sb06g025900 Sorghum bicolor Sb06g025900 I 0.000
CBF4 Arabidopsis lyrata scaffold_801637.1 I 0.000
Si011005m.g Setaria italica Si011005m.g I 0.000
Si018262m.g Setaria italica Si018262m.g I 0.000
Solyc03g026270.1 Solanum lycopersicum Solyc03g026270.1 I 0.000
Solyc03g026280.2 Solanum lycopersicum Solyc03g026280.2 I 0.000
Solyc03g124110.1 Solanum lycopersicum Solyc03g124110.1 I 0.000
Solyc08g007820.1 Solanum lycopersicum Solyc08g007820.1 I 0.000
TCM_016175 Theobroma cacao TCM_016175 I 0.000
Thhalv10009978m.g Eutrema salsugineum Thhalv10009978m.g I 0.000
Thhalv10015252m.g Eutrema salsugineum Thhalv10015252m.g I 0.000
Thhalv10027405m.g Eutrema salsugineum Thhalv10027405m.g I 0.000
VIT_02s0025g04460 Vitis vinifera VIT_02s0025g04460 I 0.000
VIT_11s0016g02140 Vitis vinifera VIT_11s0016g02140 I 0.000
VIT_16s0100g00380 Vitis vinifera VIT_16s0100g00380 I 0.000