PK26613.1 (Cannabis sativa)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 PK26613.1 T251179_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT-GTL1
M06968_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_col_a 		0.828 0.647
AT-GTL1
M06969_2.00 		Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY		 Dap-seq
OMalley et al.(2016)
GTL1_colamp_a 		0.828 0.647
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26613.1 MADF 141 212
PK26613.1 MADF 436 508

Links

Other MADF family TFs
Other Cannabis sativa TFs

189 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29576.m000223 Ricinus communis 29576.m000223 I 0.931
30068.m002635 Ricinus communis 30068.m002635 I 0.829
AMTR_s00030p00088210 Amborella trichopoda AMTR_s00030p00088210 I 0.813
AMTR_s00041p00147950 Amborella trichopoda AMTR_s00041p00147950 I 0.872
Aquca_037_00343 Aquilegia coerulea Aquca_037_00343 I 0.856
AT-GTL1 Arabidopsis thaliana AT1G33240 D 0.828
AT-GTL1 Arabidopsis lyrata fgenesh2_kg.1__3451__AT1G33240.1 I 0.828
AT-GTL1 Vitis vinifera VIT_02s0025g03220 I 0.831
BGIOSGA005934 Oryza indica BGIOSGA005934 I 0.858
BGIOSGA014631 Oryza indica BGIOSGA014631 I 0.862
BGIOSGA031553 Oryza indica BGIOSGA031553 I 0.860
Bo6g049430 Brassica oleracea Bo6g049430 I 0.833
Bra008285 Brassica rapa Bra008285 I 0.915
Bra040010 Brassica rapa Bra040010 I 0.833
BRADI3G30457 Brachypodium distachyon BRADI3G30457 I 0.839
BRADI5G17150 Brachypodium distachyon BRADI5G17150 I 0.849
Cagra.20992s0001 Capsella grandiflora Cagra.20992s0001 I 0.902
Cagra.6133s0035 Capsella grandiflora Cagra.6133s0035 I 0.820
Carubv10008638m.g Capsella rubella Carubv10008638m.g I 0.833
Carubv10019974m.g Capsella rubella Carubv10019974m.g I 0.902
cassava16715.m1 Manihot esculenta cassava16715.m1 I 0.897
cassava16854.m1 Manihot esculenta cassava16854.m1 I 0.922
cassava21480.m1 Manihot esculenta cassava21480.m1 I 0.911
cassava22361.valid.m1 Manihot esculenta cassava22361.valid.m1 I 0.827
cassava22362.valid.m1 Manihot esculenta cassava22362.valid.m1 I 0.827
cassava22363.valid.m1 Manihot esculenta cassava22363.valid.m1 I 0.827
cassava2484.valid.m1 Manihot esculenta cassava2484.valid.m1 I 0.865
Ca_04385 Cicer arietinum Ca_04385 I 0.901
Ciclev10000593m.g Citrus clementina Ciclev10000593m.g I 0.923
Ciclev10000627m.g Citrus clementina Ciclev10000627m.g I 0.922
Ciclev10018915m.g Citrus clementina Ciclev10018915m.g I 0.844
Ciclev10025533m.g Citrus clementina Ciclev10025533m.g I 0.917
Cla005046 Citrullus lanatus Cla005046 I 0.840
Cucsa.193210 Cucumis sativus Cucsa.193210 I 0.833
evm.TU.supercontig_2611.1 Carica papaya evm.TU.supercontig_2611.1 I 0.909
evm.TU.supercontig_37.120 Carica papaya evm.TU.supercontig_37.120 I 0.865
e_gw1.85.39.1 Physcomitrella patens e_gw1.85.39.1 I 0.832
F775_24861 Aegilops tauschii F775_24861 N 0.814
F775_26337 Aegilops tauschii F775_26337 I 0.842
gene01828-v1.0-hybrid Fragaria vesca gene01828-v1.0-hybrid I 0.813
gene08173-v1.0-hybrid Fragaria vesca gene08173-v1.0-hybrid I 0.905
gene08175-v1.0-hybrid Fragaria vesca gene08175-v1.0-hybrid I 0.897
GLYMA02G09060 Glycine max GLYMA02G09060 I 0.905
GLYMA10G36950 Glycine max GLYMA10G36950 I 0.916
GLYMA10G36960 Glycine max GLYMA10G36960 I 0.911
GLYMA20G30640 Glycine max GLYMA20G30640 I 0.911
Gorai.002G231500 Gossypium raimondii Gorai.002G231500 I 0.930
Gorai.003G072300 Gossypium raimondii Gorai.003G072300 I 0.830
Gorai.008G262400 Gossypium raimondii Gorai.008G262400 I 0.835
GRMZM2G016649 Zea mays GRMZM2G016649 I 0.866
GRMZM2G063203 Zea mays GRMZM2G063203 I 0.844
GRMZM2G169580 Zea mays GRMZM2G169580 I 0.855
GRMZM2G414159 Zea mays GRMZM2G414159 I 0.878
GSMUA_Achr11G03520_001 Musa acuminata GSMUA_Achr11G03520_001 I 0.846
GSMUA_Achr2G11910_001 Musa acuminata GSMUA_Achr2G11910_001 I 0.000
GSMUA_Achr5G19950_001 Musa acuminata GSMUA_Achr5G19950_001 I 0.879
GSMUA_Achr9G18800_001 Musa acuminata GSMUA_Achr9G18800_001 I 0.000
gw1.19.47.1 Physcomitrella patens gw1.19.47.1 I 0.848
LPERR02G21190 Leersia perrieri LPERR02G21190 I 0.820
LPERR03G01010 Leersia perrieri LPERR03G01010 I 0.867
LPERR04G16420 Leersia perrieri LPERR04G16420 I 0.876
LPERR10G12070 Leersia perrieri LPERR10G12070 I 0.848
Lus10018888.g Linum usitatissimum Lus10018888.g I 0.930
MDP0000156139 Malus domestica MDP0000156139 I 0.887
MDP0000451038 Malus domestica MDP0000451038 I 0.826
MDP0000451107 Malus domestica MDP0000451107 I 0.878
MDP0000701272 Malus domestica MDP0000701272 I 0.838
mgf004276m Mimulus guttatus mgf004276m I 0.814
mgf018892m Mimulus guttatus mgf018892m N 0.927
mgf021983m Mimulus guttatus mgf021983m I 0.935
MLOC_22988 Hordeum vulgare MLOC_22988 I 0.837
MLOC_70549 Hordeum vulgare MLOC_70549 I 0.866
MLOC_74813 Hordeum vulgare MLOC_74813 I 0.866
MTR_1g098870 Medicago truncatula MTR_1g098870 I 0.904
OB02G33250 Oryza brachyantha OB02G33250 I 0.862
OB04G27270 Oryza brachyantha OB04G27270 I 0.867
OBART02G25970 Oryza barthii OBART02G25970 I 0.846
OBART04G20290 Oryza barthii OBART04G20290 I 0.862
OGLUM02G26410 Oryza glumaepatula OGLUM02G26410 I 0.858
OGLUM03G01010 Oryza glumaepatula OGLUM03G01010 I 0.874
OGLUM04G20210 Oryza glumaepatula OGLUM04G20210 I 0.862
OGLUM10G15720 Oryza glumaepatula OGLUM10G15720 I 0.860
OLONG_017894 Oryza longistaminata OLONG_017894 I 0.856
OMERI03G00890 Oryza meridionalis OMERI03G00890 I 0.874
OMERI10G12340 Oryza meridionalis OMERI10G12340 I 0.860
ONIVA03G01170 Oryza nivara ONIVA03G01170 I 0.864
ONIVA04G18520 Oryza nivara ONIVA04G18520 I 0.862
ONIVA05G15440 Oryza nivara ONIVA05G15440 I 0.858
ONIVA10G17310 Oryza nivara ONIVA10G17310 I 0.860
OPUNC02G23730 Oryza punctata OPUNC02G23730 I 0.843
OPUNC04G17930 Oryza punctata OPUNC04G17930 I 0.867
OPUNC10G14260 Oryza punctata OPUNC10G14260 I 0.873
orange1.1g003766m.g Citrus sinensis orange1.1g003766m.g I 0.844
orange1.1g006925m.g Citrus sinensis orange1.1g006925m.g I 0.923
orange1.1g007316m.g Citrus sinensis orange1.1g007316m.g I 0.922
orange1.1g012030m.g Citrus sinensis orange1.1g012030m.g I 0.917
ORGLA02G0222200 Oryza glaberrima ORGLA02G0222200 I 0.846
ORGLA03G0008300 Oryza glaberrima ORGLA03G0008300 I 0.886
ORUFI02G27390 Oryza rufipogon ORUFI02G27390 I 0.858
ORUFI03G00820 Oryza rufipogon ORUFI03G00820 I 0.864
ORUFI04G21880 Oryza rufipogon ORUFI04G21880 I 0.862
ORUFI10G16810 Oryza rufipogon ORUFI10G16810 I 0.860
Pavir.Ab02437 Panicum virgatum Pavir.Ab02437 I 0.864
Pavir.Gb01188 Panicum virgatum Pavir.Gb01188 I 0.855
Pavir.Ia04768 Panicum virgatum Pavir.Ia04768 I 0.867
Pavir.Ib00103 Panicum virgatum Pavir.Ib00103 I 0.826
PGSC0003DMG400024107 Solanum tuberosum PGSC0003DMG400024107 I 0.916
Pm022570 Prunus mume Pm022570 I 0.898
Pm022572 Prunus mume Pm022572 I 0.892
Pm024289 Prunus mume Pm024289 I 0.848
POPTR_0001s45870 Populus trichocarpa POPTR_0001s45870 I 0.848
POPTR_0002s06900 Populus trichocarpa POPTR_0002s06900 I 0.910
POPTR_0002s06920 Populus trichocarpa POPTR_0002s06920 I 0.922
POPTR_0005s21410 Populus trichocarpa POPTR_0005s21410 I 0.925
POPTR_0005s21420 Populus trichocarpa POPTR_0005s21420 I 0.910
POPTR_0011s15050 Populus trichocarpa POPTR_0011s15050 I 0.828
POPTR_0019s02650 Populus trichocarpa POPTR_0019s02650 I 0.913
PRUPE_ppa001704mg Prunus persica PRUPE_ppa001704mg I 0.848
PRUPE_ppa002848mg Prunus persica PRUPE_ppa002848mg I 0.892
PRUPE_ppa021097mg Prunus persica PRUPE_ppa021097mg I 0.889
SapurV1A.0047s0660 Salix purpurea SapurV1A.0047s0660 I 0.836
SapurV1A.0066s0010 Salix purpurea SapurV1A.0066s0010 I 0.895
SapurV1A.0285s0240 Salix purpurea SapurV1A.0285s0240 I 0.848
SapurV1A.0625s0080 Salix purpurea SapurV1A.0625s0080 I 0.901
SapurV1A.0655s0060 Salix purpurea SapurV1A.0655s0060 I 0.900
Sb01g017120 Sorghum bicolor Sb01g017120 I 0.836
Sb04g033390 Sorghum bicolor Sb04g033390 I 0.855
Sb06g023980 Sorghum bicolor Sb06g023980 I 0.866
SELMODRAFT_120369 Selaginella moellendorffii SELMODRAFT_120369 I 0.000
SELMODRAFT_48639 Selaginella moellendorffii SELMODRAFT_48639 I 0.842
SELMODRAFT_66294 Selaginella moellendorffii SELMODRAFT_66294 I 0.842
SELMODRAFT_85122 Selaginella moellendorffii SELMODRAFT_85122 I 0.000
Si012121m.g Setaria italica Si012121m.g I 0.855
Si016578m.g Setaria italica Si016578m.g I 0.852
Si034382m.g Setaria italica Si034382m.g I 0.861
Solyc04g071360.2 Solanum lycopersicum Solyc04g071360.2 I 0.916
Solyc12g056510.1 Solanum lycopersicum Solyc12g056510.1 I 0.909
TCM_015563 Theobroma cacao TCM_015563 I 0.843
TCM_035565 Theobroma cacao TCM_035565 I 0.925
TCM_035571 Theobroma cacao TCM_035571 I 0.911
Thhalv10007000m.g Eutrema salsugineum Thhalv10007000m.g I 0.841
Traes_1BL_A5A91DE10 Triticum aestivum Traes_1BL_A5A91DE10 I 0.853
Traes_2AL_9E68ABA72 Triticum aestivum Traes_2AL_9E68ABA72 I 0.842
Traes_2BL_0B80B3876 Triticum aestivum Traes_2BL_0B80B3876 I 0.842
TRIUR3_33328 Triticum urartu TRIUR3_33328 I 0.853
TRIUR3_33826 Triticum urartu TRIUR3_33826 I 0.822
VIT_18s0072g00670 Vitis vinifera VIT_18s0072g00670 I 0.900