OBART07G19610 (Oryza barthii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OBART07G19610 T003156_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.716 0.882
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.716 0.882
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART07G19610.1 AP2 49 100

Links

Other AP2 family TFs
Other Oryza barthii TFs

169 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.810
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.810
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.810
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.810
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.810
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.810
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.810
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.810
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.810
OS07G0575000 Oryza sativa OS07G0575000 I 0.810
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.802
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.795
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.794
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.792
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.792
Si030686m.g Setaria italica Si030686m.g I 0.792
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.774
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.769
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.722
Si033237m.g Setaria italica Si033237m.g I 0.720
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.720
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.720
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.719
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.718
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.717
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.717
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.717
OBART07G06690 Oryza barthii OBART07G06690 I 0.717
OB07G15030 Oryza brachyantha OB07G15030 I 0.717
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.717
OS07G0204000 Oryza sativa OS07G0204000 I 0.717
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.717
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.717
TCM_040015 Theobroma cacao TCM_040015 I 0.717
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.717
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.717
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.716
30084.m000185 Ricinus communis 30084.m000185 I 0.716
Pm025326 Prunus mume Pm025326 I 0.716
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.716
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.716
Bo2g018360 Brassica oleracea Bo2g018360 I 0.716
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.716
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.716
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.716
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.716
TCM_025913 Theobroma cacao TCM_025913 I 0.716
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.716
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.716
Ca_08232 Cicer arietinum Ca_08232 I 0.716
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.716
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.716
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.716
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.716
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.716
Bo3g013830 Brassica oleracea Bo3g013830 I 0.716
Bra006518 Brassica rapa Bra006518 I 0.716
Bra002262 Brassica rapa Bra002262 I 0.716
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.716
Bo9g152440 Brassica oleracea Bo9g152440 I 0.716
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.716
Bra020063 Brassica rapa Bra020063 I 0.716
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.716
MDP0000177547 Malus domestica MDP0000177547 I 0.716
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.713
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.713
mgf022665m Mimulus guttatus mgf022665m I 0.713
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.713
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.712
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.712
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.712
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.709
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.708
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.707
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.706
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.706
MDP0000525933 Malus domestica MDP0000525933 I 0.705
Pm000004 Prunus mume Pm000004 I 0.705
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.705
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.704
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.704
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.704
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.704
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.704
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.702
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.702
Cla012318 Citrullus lanatus Cla012318 I 0.702
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.696
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.696
PK25269.1 Cannabis sativa PK25269.1 I 0.692
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.691
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.690
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.689
TCM_011632 Theobroma cacao TCM_011632 I 0.689
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.687
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.687
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.687
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.687
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.687
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.687
F775_02727 Aegilops tauschii F775_02727 I 0.687
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.687
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.687
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.687
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.687
MDP0000276536 Malus domestica MDP0000276536 I 0.687
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.687
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.687
OBART12G17080 Oryza barthii OBART12G17080 I 0.687
PK13330.1 Cannabis sativa PK13330.1 I 0.687
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.687
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.687
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.687
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.687
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.687
MDP0000551969 Malus domestica MDP0000551969 I 0.687
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.687
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.687
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.687
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.687
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.687
Ca_10494 Cicer arietinum Ca_10494 I 0.687
Pm015931 Prunus mume Pm015931 I 0.687
29635.m000461 Ricinus communis 29635.m000461 I 0.687
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.687
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.687
Si038848m.g Setaria italica Si038848m.g I 0.687
TCM_018659 Theobroma cacao TCM_018659 I 0.687
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.687
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.687
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.687
OS12G0582900 Oryza sativa OS12G0582900 I 0.687
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.687
30174.m009031 Ricinus communis 30174.m009031 I 0.686
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.685
29813.m001543 Ricinus communis 29813.m001543 I 0.685
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.685
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.685
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.684
Cla010474 Citrullus lanatus Cla010474 I 0.684
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.684
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.684
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.684
Si024417m.g Setaria italica Si024417m.g I 0.684
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.684
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.684
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.684
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.684
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.684
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.684
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.684
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.683
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.683
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.683
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.683
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.682
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.682
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.680
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.680
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.680
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.680
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.679
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.679
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.679
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.679
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.679
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.679
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.678
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.677