Sb02g030350 (Sorghum bicolor)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Sb02g030350 T004973_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.717 0.745
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.717 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb02g030350.1 AP2 26 77

Links

Other AP2 family TFs
Other Sorghum bicolor TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.823
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.815
Si032213m.g Setaria italica Si032213m.g I 0.815
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.806
mgf018851m Mimulus guttatus mgf018851m I 0.806
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.806
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.806
TCM_005425 Theobroma cacao TCM_005425 I 0.806
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.806
MDP0000138669 Malus domestica MDP0000138669 I 0.806
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.806
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.806
Pm008788 Prunus mume Pm008788 I 0.806
MDP0000133476 Malus domestica MDP0000133476 I 0.806
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.806
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.806
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.806
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.805
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.805
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.805
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.803
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.803
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.803
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.803
30174.m008961 Ricinus communis 30174.m008961 I 0.802
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.790
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.790
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.789
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.784
Cla021590 Citrullus lanatus Cla021590 I 0.780
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.780
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.778
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.778
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.778
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.774
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.774
Ca_16397 Cicer arietinum Ca_16397 I 0.774
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.774
PK25269.1 Cannabis sativa PK25269.1 I 0.773
OB09G23520 Oryza brachyantha OB09G23520 I 0.771
Si027288m.g Setaria italica Si027288m.g I 0.758
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.749
TCM_015579 Theobroma cacao TCM_015579 I 0.742
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.742
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.742
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.742
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.741
TCM_011632 Theobroma cacao TCM_011632 I 0.741
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.740
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.740
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.740
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.740
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.740
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.740
30068.m002623 Ricinus communis 30068.m002623 I 0.740
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.740
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.740
Cla010474 Citrullus lanatus Cla010474 I 0.740
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.740
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.740
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.740
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.740
Si024417m.g Setaria italica Si024417m.g I 0.740
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.740
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.740
MDP0000551969 Malus domestica MDP0000551969 I 0.739
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.739
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.739
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.739
TCM_018659 Theobroma cacao TCM_018659 I 0.739
Ca_10494 Cicer arietinum Ca_10494 I 0.739
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.739
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.739
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.739
PK13330.1 Cannabis sativa PK13330.1 I 0.739
Si038848m.g Setaria italica Si038848m.g I 0.739
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.739
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.739
Pm015931 Prunus mume Pm015931 I 0.739
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.739
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.739
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.739
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.739
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.739
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.739
F775_02727 Aegilops tauschii F775_02727 I 0.739
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.739
29635.m000461 Ricinus communis 29635.m000461 I 0.739
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.739
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.739
MDP0000276536 Malus domestica MDP0000276536 I 0.739
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.739
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.739
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.739
OS12G0582900 Oryza sativa OS12G0582900 I 0.739
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.739
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.739
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.739
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.739
OBART12G17080 Oryza barthii OBART12G17080 I 0.739
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.739
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.739
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.739
29813.m001543 Ricinus communis 29813.m001543 I 0.738
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.738
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.738
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.738
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.738
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.735
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.734
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.734
Ca_00417 Cicer arietinum Ca_00417 I 0.731
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.730
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.730
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.730
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.730
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.730
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.730
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.728
Ca_25424 Cicer arietinum Ca_25424 I 0.728
30174.m009031 Ricinus communis 30174.m009031 I 0.727
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.727
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.723
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.722
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.721
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.720
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.719
MDP0000197375 Malus domestica MDP0000197375 I 0.718
Pm030235 Prunus mume Pm030235 I 0.718
MDP0000157628 Malus domestica MDP0000157628 I 0.718
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.718
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.717
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.717
Bra006518 Brassica rapa Bra006518 I 0.717
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.717
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.717
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.717
OBART07G06690 Oryza barthii OBART07G06690 I 0.717
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.717
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.717
Bra020063 Brassica rapa Bra020063 I 0.717
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.717
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.717
MDP0000177547 Malus domestica MDP0000177547 I 0.717
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.717
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.717
Bo3g013830 Brassica oleracea Bo3g013830 I 0.717
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.717
Bo2g018360 Brassica oleracea Bo2g018360 I 0.717
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.717
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.717
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.717
TCM_014471 Theobroma cacao TCM_014471 I 0.717
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.717
TCM_025913 Theobroma cacao TCM_025913 I 0.717
Bo9g152440 Brassica oleracea Bo9g152440 I 0.717
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.717
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.717
Ca_08232 Cicer arietinum Ca_08232 I 0.717
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.717
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.717
TCM_040015 Theobroma cacao TCM_040015 I 0.717
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.717
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.717
Bra002262 Brassica rapa Bra002262 I 0.717
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.717
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.717
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.717
30084.m000185 Ricinus communis 30084.m000185 I 0.717
OS07G0204000 Oryza sativa OS07G0204000 I 0.717
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.717
OB07G15030 Oryza brachyantha OB07G15030 I 0.717
Pm025326 Prunus mume Pm025326 I 0.717
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.717
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.716
MDP0000127123 Malus domestica MDP0000127123 N 0.716
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.716
Si033237m.g Setaria italica Si033237m.g I 0.716
Cla005054 Citrullus lanatus Cla005054 N 0.715
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.715
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.715
mgf022665m Mimulus guttatus mgf022665m I 0.715
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.715
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.713
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.712
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.712
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.712
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.711
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.710
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.709
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.709
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.709
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.709
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.707
MDP0000525933 Malus domestica MDP0000525933 I 0.706
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.706
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.706
Pm000004 Prunus mume Pm000004 I 0.706
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.706
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.705
Cla012318 Citrullus lanatus Cla012318 I 0.704
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.704
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.704
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.704
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.704
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.704
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.704
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.703
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.703
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.703
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.703
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.703
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.701
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.701
F775_04303 Aegilops tauschii F775_04303 I 0.701
MDP0000316843 Malus domestica MDP0000316843 N 0.700
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.698
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.698
PK28640.1 Cannabis sativa PK28640.1 I 0.695
mgf022810m Mimulus guttatus mgf022810m I 0.693
mgf023693m Mimulus guttatus mgf023693m I 0.693
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.691
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.688
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.687
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.687
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.687
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.687
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.687
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.686
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.685
mgf024137m Mimulus guttatus mgf024137m N 0.685
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.685
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.685
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.683
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.683
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.683
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.683
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.683
OBART07G19610 Oryza barthii OBART07G19610 I 0.683
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.683
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.683
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.683
OS07G0575000 Oryza sativa OS07G0575000 I 0.683
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.683
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.683
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.682
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.680
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.680
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.680