AMTR_s00006p00266920 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00006p00266920 T000332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.702 0.720
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.702 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN05896 AP2 107 157

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_014471 Theobroma cacao TCM_014471 I 0.794
Pm030235 Prunus mume Pm030235 I 0.789
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.778
MDP0000197375 Malus domestica MDP0000197375 I 0.775
MDP0000157628 Malus domestica MDP0000157628 I 0.775
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.773
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.773
30174.m009031 Ricinus communis 30174.m009031 I 0.760
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.759
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.755
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.755
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.754
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.747
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.746
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.745
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.745
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.744
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.738
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.737
PK25269.1 Cannabis sativa PK25269.1 I 0.736
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.735
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.735
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.735
30174.m008961 Ricinus communis 30174.m008961 I 0.734
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.733
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.733
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.731
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.731
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.731
mgf018851m Mimulus guttatus mgf018851m I 0.731
TCM_005425 Theobroma cacao TCM_005425 I 0.731
Pm008788 Prunus mume Pm008788 I 0.731
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.731
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.731
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.731
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.731
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.731
MDP0000133476 Malus domestica MDP0000133476 I 0.731
MDP0000138669 Malus domestica MDP0000138669 I 0.731
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.731
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.728
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.727
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.727
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.725
Si032213m.g Setaria italica Si032213m.g I 0.725
PK28640.1 Cannabis sativa PK28640.1 I 0.724
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.724
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.723
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.723
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.723
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.723
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.723
TCM_011632 Theobroma cacao TCM_011632 I 0.723
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.722
Si024417m.g Setaria italica Si024417m.g I 0.722
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.722
Cla010474 Citrullus lanatus Cla010474 I 0.722
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.722
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.722
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.722
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.722
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.722
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.722
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.722
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.721
Si038848m.g Setaria italica Si038848m.g I 0.721
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.721
MDP0000551969 Malus domestica MDP0000551969 I 0.721
MDP0000276536 Malus domestica MDP0000276536 I 0.721
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.721
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.721
PK13330.1 Cannabis sativa PK13330.1 I 0.721
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.721
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.721
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.721
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.721
Pm015931 Prunus mume Pm015931 I 0.721
29635.m000461 Ricinus communis 29635.m000461 I 0.721
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.721
TCM_018659 Theobroma cacao TCM_018659 I 0.721
Ca_10494 Cicer arietinum Ca_10494 I 0.721
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.721
OS12G0582900 Oryza sativa OS12G0582900 I 0.721
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.721
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.721
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.721
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.721
F775_02727 Aegilops tauschii F775_02727 I 0.721
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.721
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.721
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.721
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.721
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.721
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.721
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.721
OBART12G17080 Oryza barthii OBART12G17080 I 0.721
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.721
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.721
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.721
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.721
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.721
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.720
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.720
29813.m001543 Ricinus communis 29813.m001543 I 0.720
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.720
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.719
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.719
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.717
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.717
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.717
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.717
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.717
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.715
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.715
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.715
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.715
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.715
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.715
Ca_06590 Cicer arietinum Ca_06590 N 0.715
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.715
Ca_16397 Cicer arietinum Ca_16397 I 0.715
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.714
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.712
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.712
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.712
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.712
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.711
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.709
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.709
Ca_00417 Cicer arietinum Ca_00417 I 0.709
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.708
Gorai.001G064900 Gossypium raimondii Gorai.001G064900 N 0.707
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.706
mgf022665m Mimulus guttatus mgf022665m I 0.705
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.705
Ca_25424 Cicer arietinum Ca_25424 I 0.705
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.704
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.704
Cla021590 Citrullus lanatus Cla021590 I 0.704
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.702
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.702
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.702
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.702
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.702
MDP0000177547 Malus domestica MDP0000177547 I 0.702
Bo2g018360 Brassica oleracea Bo2g018360 I 0.702
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.702
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.702
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.702
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.702
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.702
Bo3g013830 Brassica oleracea Bo3g013830 I 0.702
Bo9g152440 Brassica oleracea Bo9g152440 I 0.702
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.702
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.702
Bra020063 Brassica rapa Bra020063 I 0.702
Bra006518 Brassica rapa Bra006518 I 0.702
Bra002262 Brassica rapa Bra002262 I 0.702
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.702
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.702
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.702
Ca_08232 Cicer arietinum Ca_08232 I 0.702
OBART07G06690 Oryza barthii OBART07G06690 I 0.702
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.702
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.702
Pm025326 Prunus mume Pm025326 I 0.702
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.702
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.702
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.702
30084.m000185 Ricinus communis 30084.m000185 I 0.702
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.702
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.702
OB07G15030 Oryza brachyantha OB07G15030 I 0.702
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.702
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.702
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.702
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.702
OS07G0204000 Oryza sativa OS07G0204000 I 0.702
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.702
TCM_040015 Theobroma cacao TCM_040015 I 0.702
TCM_025913 Theobroma cacao TCM_025913 I 0.702
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.701
Si033237m.g Setaria italica Si033237m.g I 0.701
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.701
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.701
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.701
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.700
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.700
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.698
OB09G23520 Oryza brachyantha OB09G23520 I 0.697
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.694
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.693
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.693
Pm000004 Prunus mume Pm000004 I 0.692
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.692
MDP0000525933 Malus domestica MDP0000525933 I 0.692
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.691
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.690
TCM_015579 Theobroma cacao TCM_015579 I 0.690
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.690
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.690
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.689
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.689
Cla012318 Citrullus lanatus Cla012318 I 0.689
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.689
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.689
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.689
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.689
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.689
F775_04303 Aegilops tauschii F775_04303 I 0.688
Cla019296 Citrullus lanatus Cla019296 N 0.687
Cucsa.198700 Cucumis sativus Cucsa.198700 N 0.687
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.686
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.686
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.686
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.685
30068.m002623 Ricinus communis 30068.m002623 I 0.684
mgf022810m Mimulus guttatus mgf022810m I 0.681
mgf023693m Mimulus guttatus mgf023693m I 0.681
evm.TU.supercontig_13.83 Carica papaya evm.TU.supercontig_13.83 N 0.678