LPERR09G12960 (Leersia perrieri)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 LPERR09G12960 T002659_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.710 0.706
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.710 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR09G12960.1 AP2 26 77

Links

Other AP2 family TFs
Other Leersia perrieri TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.825
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.786
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.786
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.786
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.784
Si032213m.g Setaria italica Si032213m.g I 0.784
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.784
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.784
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.778
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.778
OB09G23520 Oryza brachyantha OB09G23520 I 0.777
MDP0000138669 Malus domestica MDP0000138669 I 0.775
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.775
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.775
MDP0000133476 Malus domestica MDP0000133476 I 0.775
TCM_005425 Theobroma cacao TCM_005425 I 0.775
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.775
mgf018851m Mimulus guttatus mgf018851m I 0.775
Pm008788 Prunus mume Pm008788 I 0.775
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.775
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.775
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.775
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.775
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.775
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.775
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.774
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.772
30174.m008961 Ricinus communis 30174.m008961 I 0.771
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.759
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.759
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.757
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.753
PK25269.1 Cannabis sativa PK25269.1 I 0.753
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.748
Cla021590 Citrullus lanatus Cla021590 I 0.748
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.747
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.743
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.743
Ca_16397 Cicer arietinum Ca_16397 I 0.743
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.743
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.739
TCM_011632 Theobroma cacao TCM_011632 I 0.739
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.737
Ca_10494 Cicer arietinum Ca_10494 I 0.737
29635.m000461 Ricinus communis 29635.m000461 I 0.737
Pm015931 Prunus mume Pm015931 I 0.737
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.737
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.737
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.737
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.737
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.737
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.737
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.737
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.737
Si038848m.g Setaria italica Si038848m.g I 0.737
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.737
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.737
TCM_018659 Theobroma cacao TCM_018659 I 0.737
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.737
OS12G0582900 Oryza sativa OS12G0582900 I 0.737
MDP0000276536 Malus domestica MDP0000276536 I 0.737
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.737
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.737
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.737
OBART12G17080 Oryza barthii OBART12G17080 I 0.737
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.737
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.737
F775_02727 Aegilops tauschii F775_02727 I 0.737
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.737
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.737
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.737
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.737
MDP0000551969 Malus domestica MDP0000551969 I 0.737
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.737
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.737
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.737
PK13330.1 Cannabis sativa PK13330.1 I 0.737
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.737
29813.m001543 Ricinus communis 29813.m001543 I 0.735
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.735
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.735
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.735
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.734
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.734
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.734
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.734
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.734
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.734
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.734
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.734
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.734
Cla010474 Citrullus lanatus Cla010474 I 0.734
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.734
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.734
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.734
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.734
Si024417m.g Setaria italica Si024417m.g I 0.734
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.733
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.733
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.731
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.731
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.731
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.728
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.728
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.727
Si027288m.g Setaria italica Si027288m.g I 0.726
Ca_25424 Cicer arietinum Ca_25424 I 0.725
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.724
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.723
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.722
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.722
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.722
TCM_015579 Theobroma cacao TCM_015579 I 0.722
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.722
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.722
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.720
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.720
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.720
30174.m009031 Ricinus communis 30174.m009031 I 0.719
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.718
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.716
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.714
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.714
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.713
Si033237m.g Setaria italica Si033237m.g I 0.713
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.713
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.713
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.711
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.711
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.711
MDP0000177547 Malus domestica MDP0000177547 I 0.711
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.711
Ca_00417 Cicer arietinum Ca_00417 I 0.711
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.711
TCM_025913 Theobroma cacao TCM_025913 I 0.711
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.711
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.711
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.711
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.711
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.711
Ca_08232 Cicer arietinum Ca_08232 I 0.711
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.711
Pm025326 Prunus mume Pm025326 I 0.711
30068.m002623 Ricinus communis 30068.m002623 I 0.710
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.710
30084.m000185 Ricinus communis 30084.m000185 I 0.710
OB07G15030 Oryza brachyantha OB07G15030 I 0.710
Bra020063 Brassica rapa Bra020063 I 0.710
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.710
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.710
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.710
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.710
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.710
OS07G0204000 Oryza sativa OS07G0204000 I 0.710
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.710
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.710
Bra006518 Brassica rapa Bra006518 I 0.710
OBART07G06690 Oryza barthii OBART07G06690 I 0.710
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.710
Bo9g152440 Brassica oleracea Bo9g152440 I 0.710
Bo3g013830 Brassica oleracea Bo3g013830 I 0.710
Bo2g018360 Brassica oleracea Bo2g018360 I 0.710
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.710
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.710
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.710
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.710
Bra002262 Brassica rapa Bra002262 I 0.710
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.710
TCM_040015 Theobroma cacao TCM_040015 I 0.710
MDP0000157628 Malus domestica MDP0000157628 I 0.709
Pm030235 Prunus mume Pm030235 I 0.709
MDP0000197375 Malus domestica MDP0000197375 I 0.709
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.709
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.709
TCM_014471 Theobroma cacao TCM_014471 I 0.708
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.708
mgf022665m Mimulus guttatus mgf022665m I 0.708
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.708
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.707
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.707
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.705
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.704
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.704
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.702
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.701
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.700
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.699
MDP0000525933 Malus domestica MDP0000525933 I 0.699
Pm000004 Prunus mume Pm000004 I 0.699
F775_04303 Aegilops tauschii F775_04303 I 0.698
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.697
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.697
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.697
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.697
Cla012318 Citrullus lanatus Cla012318 I 0.697
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.697
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.696
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.695
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.694
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.694
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.691
Cla005054 Citrullus lanatus Cla005054 N 0.691
MDP0000127123 Malus domestica MDP0000127123 N 0.691
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.690
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.689
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.689
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.689
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.689
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.688
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.688
mgf022810m Mimulus guttatus mgf022810m I 0.687
mgf023693m Mimulus guttatus mgf023693m I 0.687
PK28640.1 Cannabis sativa PK28640.1 I 0.687
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.685
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.684
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.684
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.684
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.682
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.682
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.681
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.681
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.681
MDP0000316843 Malus domestica MDP0000316843 N 0.680
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.680
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.678
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.677