Solyc01g091760.2 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc01g091760.2 T005407_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.727 0.745
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.727 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc01g091760.2.1 AP2 33 84

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.826
MDP0000138669 Malus domestica MDP0000138669 I 0.806
MDP0000133476 Malus domestica MDP0000133476 I 0.806
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.806
Pm008788 Prunus mume Pm008788 I 0.806
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.806
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.806
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.806
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.806
mgf018851m Mimulus guttatus mgf018851m I 0.806
TCM_005425 Theobroma cacao TCM_005425 I 0.806
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.806
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.806
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.806
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.806
30174.m008961 Ricinus communis 30174.m008961 I 0.805
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.803
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.799
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.798
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.796
Si032213m.g Setaria italica Si032213m.g I 0.796
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.790
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.790
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.786
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.786
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.786
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.784
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.784
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.780
Cla021590 Citrullus lanatus Cla021590 I 0.780
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.779
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.774
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.774
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.774
Ca_16397 Cicer arietinum Ca_16397 I 0.774
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.774
PK25269.1 Cannabis sativa PK25269.1 I 0.762
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.759
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.759
OB09G23520 Oryza brachyantha OB09G23520 I 0.752
30174.m009031 Ricinus communis 30174.m009031 I 0.747
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.746
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.741
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.740
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.740
Si027288m.g Setaria italica Si027288m.g I 0.739
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.739
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.737
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.737
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.737
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.733
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.733
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.733
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.733
TCM_015579 Theobroma cacao TCM_015579 I 0.733
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.733
TCM_011632 Theobroma cacao TCM_011632 I 0.733
30068.m002623 Ricinus communis 30068.m002623 I 0.731
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.730
29813.m001543 Ricinus communis 29813.m001543 I 0.730
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.730
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.730
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.730
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.729
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.729
Si024417m.g Setaria italica Si024417m.g I 0.729
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.729
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.729
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.729
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.729
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.729
Cla010474 Citrullus lanatus Cla010474 I 0.729
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.729
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.729
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.729
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.729
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.729
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.729
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.728
MDP0000551969 Malus domestica MDP0000551969 I 0.728
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.728
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.728
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.728
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.728
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.728
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.728
MDP0000276536 Malus domestica MDP0000276536 I 0.728
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.728
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.728
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.728
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.728
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.728
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.728
F775_02727 Aegilops tauschii F775_02727 I 0.728
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.728
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.728
PK13330.1 Cannabis sativa PK13330.1 I 0.728
Si038848m.g Setaria italica Si038848m.g I 0.728
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.728
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.728
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.728
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.728
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.728
29635.m000461 Ricinus communis 29635.m000461 I 0.728
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.728
OS12G0582900 Oryza sativa OS12G0582900 I 0.728
TCM_018659 Theobroma cacao TCM_018659 I 0.728
Pm015931 Prunus mume Pm015931 I 0.728
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.728
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.728
Ca_25424 Cicer arietinum Ca_25424 I 0.728
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.728
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.728
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.728
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.728
OBART12G17080 Oryza barthii OBART12G17080 I 0.728
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.728
Ca_10494 Cicer arietinum Ca_10494 I 0.728
Ca_08232 Cicer arietinum Ca_08232 I 0.727
TCM_025913 Theobroma cacao TCM_025913 I 0.727
30084.m000185 Ricinus communis 30084.m000185 I 0.727
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.727
TCM_040015 Theobroma cacao TCM_040015 I 0.727
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.727
Pm025326 Prunus mume Pm025326 I 0.727
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.727
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.727
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.727
OB07G15030 Oryza brachyantha OB07G15030 I 0.727
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.727
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.727
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.727
OBART07G06690 Oryza barthii OBART07G06690 I 0.727
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.727
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.727
MDP0000177547 Malus domestica MDP0000177547 I 0.727
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.727
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.727
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.727
Bo2g018360 Brassica oleracea Bo2g018360 I 0.727
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.727
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.727
Bo3g013830 Brassica oleracea Bo3g013830 I 0.727
Bo9g152440 Brassica oleracea Bo9g152440 I 0.727
Bra020063 Brassica rapa Bra020063 I 0.727
Bra006518 Brassica rapa Bra006518 I 0.727
Bra002262 Brassica rapa Bra002262 I 0.727
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.727
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.727
OS07G0204000 Oryza sativa OS07G0204000 I 0.727
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.727
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.727
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.727
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.727
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.727
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.727
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.727
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.727
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.727
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.727
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.726
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.726
Si033237m.g Setaria italica Si033237m.g I 0.726
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.725
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.725
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.725
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.724
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.724
mgf022665m Mimulus guttatus mgf022665m I 0.724
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.724
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.723
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.722
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.721
mgf023693m Mimulus guttatus mgf023693m I 0.720
Ca_00417 Cicer arietinum Ca_00417 I 0.720
mgf022810m Mimulus guttatus mgf022810m I 0.720
Pm030235 Prunus mume Pm030235 I 0.719
MDP0000197375 Malus domestica MDP0000197375 I 0.719
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.719
MDP0000157628 Malus domestica MDP0000157628 I 0.719
TCM_014471 Theobroma cacao TCM_014471 I 0.718
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.718
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.717
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.717
Pm000004 Prunus mume Pm000004 I 0.716
MDP0000525933 Malus domestica MDP0000525933 I 0.716
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.716
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.716
Cla012318 Citrullus lanatus Cla012318 I 0.714
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.714
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.713
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.713
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.713
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.713
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.713
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.712
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.711
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.709
MDP0000127123 Malus domestica MDP0000127123 N 0.707
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.707
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.706
Cla005054 Citrullus lanatus Cla005054 N 0.706
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.706
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.705
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.704
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.703
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.703
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.703
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.701
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.700
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.700
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.700
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.699
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.697
PK28640.1 Cannabis sativa PK28640.1 I 0.697
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.697
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.697
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.696
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.696
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.696
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.695
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.695
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.695
mgf024137m Mimulus guttatus mgf024137m N 0.694
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.693
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.692
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.691
MDP0000316843 Malus domestica MDP0000316843 N 0.691
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.691
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.690
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.690
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.689
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.689
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.689
F775_04303 Aegilops tauschii F775_04303 I 0.689
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.688
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.687
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.687
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.686
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.686
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.685
Si030686m.g Setaria italica Si030686m.g I 0.685
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.685
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.685
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.685
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.684
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.684
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.682
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.681
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.681
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.680
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.679
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.679
OBART07G19610 Oryza barthii OBART07G19610 I 0.679
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.679
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.679
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.679
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.679
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.679
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.679
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.679
OS07G0575000 Oryza sativa OS07G0575000 I 0.679