ORUFI09G18220 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI09G18220 T004099_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.728 0.765
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.728 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI09G18220.1 AP2 17 68

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

267 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.821
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.821
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.819
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.819
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.811
Si032213m.g Setaria italica Si032213m.g I 0.811
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.805
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.805
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.802
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.802
TCM_005425 Theobroma cacao TCM_005425 I 0.802
MDP0000138669 Malus domestica MDP0000138669 I 0.802
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.802
Pm008788 Prunus mume Pm008788 I 0.802
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.802
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.802
MDP0000133476 Malus domestica MDP0000133476 I 0.802
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.802
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.802
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.802
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.802
mgf018851m Mimulus guttatus mgf018851m I 0.802
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.799
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.799
30174.m008961 Ricinus communis 30174.m008961 I 0.798
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.786
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.786
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.786
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.786
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.785
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.780
OB09G23520 Oryza brachyantha OB09G23520 I 0.777
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.776
Cla021590 Citrullus lanatus Cla021590 I 0.776
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.774
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.770
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.770
Ca_16397 Cicer arietinum Ca_16397 I 0.770
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.770
PK25269.1 Cannabis sativa PK25269.1 I 0.769
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.756
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.754
Si027288m.g Setaria italica Si027288m.g I 0.754
TCM_011632 Theobroma cacao TCM_011632 I 0.752
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.752
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.751
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.751
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.751
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.751
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.751
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.751
Si024417m.g Setaria italica Si024417m.g I 0.751
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.751
Cla010474 Citrullus lanatus Cla010474 I 0.751
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.751
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.751
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.751
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.751
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.751
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.751
Si038848m.g Setaria italica Si038848m.g I 0.750
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.750
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.750
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.750
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.750
TCM_018659 Theobroma cacao TCM_018659 I 0.750
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.750
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.750
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.750
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.750
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.750
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.750
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.750
MDP0000276536 Malus domestica MDP0000276536 I 0.750
Ca_10494 Cicer arietinum Ca_10494 I 0.750
OS12G0582900 Oryza sativa OS12G0582900 I 0.750
OBART12G17080 Oryza barthii OBART12G17080 I 0.750
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.750
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.750
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.750
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.750
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.750
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.750
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.750
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.750
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.750
F775_02727 Aegilops tauschii F775_02727 I 0.750
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.750
MDP0000551969 Malus domestica MDP0000551969 I 0.750
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.750
Pm015931 Prunus mume Pm015931 I 0.750
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.750
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.750
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.750
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.750
PK13330.1 Cannabis sativa PK13330.1 I 0.750
29635.m000461 Ricinus communis 29635.m000461 I 0.750
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.749
29813.m001543 Ricinus communis 29813.m001543 I 0.749
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.749
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.749
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.747
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.745
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.745
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.745
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.741
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.741
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.741
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.741
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.741
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.741
Ca_25424 Cicer arietinum Ca_25424 I 0.739
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.739
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.738
30174.m009031 Ricinus communis 30174.m009031 I 0.738
TCM_015579 Theobroma cacao TCM_015579 I 0.738
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.738
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.738
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.738
30068.m002623 Ricinus communis 30068.m002623 I 0.736
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.735
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.735
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.734
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.733
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.731
MDP0000197375 Malus domestica MDP0000197375 I 0.729
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.729
Pm030235 Prunus mume Pm030235 I 0.729
MDP0000157628 Malus domestica MDP0000157628 I 0.729
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.728
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.728
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.728
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.728
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.728
OB07G15030 Oryza brachyantha OB07G15030 I 0.728
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.728
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.728
TCM_014471 Theobroma cacao TCM_014471 I 0.728
30084.m000185 Ricinus communis 30084.m000185 I 0.728
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.728
Bra020063 Brassica rapa Bra020063 I 0.728
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.728
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.728
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.728
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.728
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.728
Bo2g018360 Brassica oleracea Bo2g018360 I 0.728
Bra006518 Brassica rapa Bra006518 I 0.728
Bra002262 Brassica rapa Bra002262 I 0.728
Bo9g152440 Brassica oleracea Bo9g152440 I 0.728
Bo3g013830 Brassica oleracea Bo3g013830 I 0.728
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.728
OBART07G06690 Oryza barthii OBART07G06690 I 0.728
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.728
OS07G0204000 Oryza sativa OS07G0204000 I 0.728
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.728
Ca_08232 Cicer arietinum Ca_08232 I 0.728
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.728
MDP0000177547 Malus domestica MDP0000177547 I 0.728
Pm025326 Prunus mume Pm025326 I 0.728
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.728
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.728
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.728
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.728
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.728
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.728
TCM_040015 Theobroma cacao TCM_040015 I 0.728
TCM_025913 Theobroma cacao TCM_025913 I 0.728
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.728
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.728
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.728
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.727
Ca_00417 Cicer arietinum Ca_00417 I 0.727
Si033237m.g Setaria italica Si033237m.g I 0.727
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.727
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.726
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.726
mgf022665m Mimulus guttatus mgf022665m I 0.726
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.724
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.723
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.722
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.722
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.721
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.720
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.720
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.718
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.717
MDP0000525933 Malus domestica MDP0000525933 I 0.717
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.717
Pm000004 Prunus mume Pm000004 I 0.717
Cla012318 Citrullus lanatus Cla012318 I 0.715
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.715
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.714
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.714
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.714
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.714
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.714
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.713
F775_04303 Aegilops tauschii F775_04303 I 0.712
MDP0000127123 Malus domestica MDP0000127123 N 0.712
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.711
Cla005054 Citrullus lanatus Cla005054 N 0.711
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.711
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.708
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.708
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.707
PK28640.1 Cannabis sativa PK28640.1 I 0.706
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.705
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.705
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.705
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.704
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.704
mgf023693m Mimulus guttatus mgf023693m I 0.704
mgf022810m Mimulus guttatus mgf022810m I 0.704
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.702
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.702
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.701
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.700
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.700
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.700
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.700
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.699
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.698
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.698
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.698
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.698
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.697
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.696
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.696
MDP0000316843 Malus domestica MDP0000316843 N 0.696
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.694
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.693
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.691
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.691
mgf024137m Mimulus guttatus mgf024137m N 0.688
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.687
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.686
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.685
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.685
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.684
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.684
Si030686m.g Setaria italica Si030686m.g I 0.684
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.684
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.683
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.683
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.683
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.683
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.683
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.683
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.681
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.680
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.680
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.680
OBART07G19610 Oryza barthii OBART07G19610 I 0.680
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.680
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.680
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.680
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.680
OS07G0575000 Oryza sativa OS07G0575000 I 0.680
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.680
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.680
MDP0000128326 Malus domestica MDP0000128326 I 0.679
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.678
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.678
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.678
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.677
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.677