OB09G23520 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB09G23520 T003058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.722 0.800
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.722 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB09G23520.1 AP2 25 70

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

218 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.777
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.777
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.777
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.777
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.777
Si032213m.g Setaria italica Si032213m.g I 0.777
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.777
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.775
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.775
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.771
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.771
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.768
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.768
TCM_005425 Theobroma cacao TCM_005425 I 0.768
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.768
MDP0000138669 Malus domestica MDP0000138669 I 0.768
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.768
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.768
MDP0000133476 Malus domestica MDP0000133476 I 0.768
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.768
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.768
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.768
Cla021590 Citrullus lanatus Cla021590 I 0.768
Pm008788 Prunus mume Pm008788 I 0.768
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.768
mgf018851m Mimulus guttatus mgf018851m I 0.768
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.768
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.768
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.764
30174.m008961 Ricinus communis 30174.m008961 I 0.764
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.752
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.752
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.750
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.746
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.746
OS12G0582900 Oryza sativa OS12G0582900 I 0.746
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.746
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.746
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.746
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.746
Si038848m.g Setaria italica Si038848m.g I 0.746
Ca_10494 Cicer arietinum Ca_10494 I 0.746
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.746
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.746
Cla010474 Citrullus lanatus Cla010474 I 0.746
Pm015931 Prunus mume Pm015931 I 0.746
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.746
29635.m000461 Ricinus communis 29635.m000461 I 0.746
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.746
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.746
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.746
Si024417m.g Setaria italica Si024417m.g I 0.746
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.746
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.746
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.746
PK13330.1 Cannabis sativa PK13330.1 I 0.746
TCM_018659 Theobroma cacao TCM_018659 I 0.746
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.746
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.746
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.746
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.746
F775_02727 Aegilops tauschii F775_02727 I 0.746
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.746
MDP0000276536 Malus domestica MDP0000276536 I 0.746
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.746
MDP0000551969 Malus domestica MDP0000551969 I 0.746
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.746
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.746
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.746
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.746
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.746
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.746
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.746
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.746
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.746
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.746
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.746
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.746
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.746
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.746
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.746
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.746
OBART12G17080 Oryza barthii OBART12G17080 I 0.746
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.746
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.746
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.746
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.744
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.744
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.744
29813.m001543 Ricinus communis 29813.m001543 I 0.744
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.744
TCM_011632 Theobroma cacao TCM_011632 I 0.744
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.742
PK25269.1 Cannabis sativa PK25269.1 I 0.741
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.740
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.740
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.740
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.736
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.736
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.736
Si027288m.g Setaria italica Si027288m.g I 0.736
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.736
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.735
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.735
Ca_16397 Cicer arietinum Ca_16397 I 0.735
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.735
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.735
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.735
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.732
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.728
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.723
Pm025326 Prunus mume Pm025326 I 0.723
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.723
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.723
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.723
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.723
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.723
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.723
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.723
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.723
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.723
TCM_025913 Theobroma cacao TCM_025913 I 0.723
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.723
Ca_08232 Cicer arietinum Ca_08232 I 0.723
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.723
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.723
MDP0000177547 Malus domestica MDP0000177547 I 0.723
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.722
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.722
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.722
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.722
TCM_040015 Theobroma cacao TCM_040015 I 0.722
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.722
Si033237m.g Setaria italica Si033237m.g I 0.722
OB07G15030 Oryza brachyantha OB07G15030 I 0.722
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.722
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.722
Bra002262 Brassica rapa Bra002262 I 0.722
Bra006518 Brassica rapa Bra006518 I 0.722
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.722
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.722
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.722
Bra020063 Brassica rapa Bra020063 I 0.722
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.722
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.722
OS07G0204000 Oryza sativa OS07G0204000 I 0.722
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.722
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.722
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.722
30084.m000185 Ricinus communis 30084.m000185 I 0.722
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.722
OBART07G06690 Oryza barthii OBART07G06690 I 0.722
Bo3g013830 Brassica oleracea Bo3g013830 I 0.722
Bo9g152440 Brassica oleracea Bo9g152440 I 0.722
Bo2g018360 Brassica oleracea Bo2g018360 I 0.722
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.721
mgf022665m Mimulus guttatus mgf022665m I 0.720
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.719
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.719
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.717
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.717
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.716
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.715
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.715
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.712
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.712
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.711
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.710
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.710
TCM_015579 Theobroma cacao TCM_015579 I 0.710
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.710
Cla012318 Citrullus lanatus Cla012318 I 0.709
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.709
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.709
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.709
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.709
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.709
MDP0000525933 Malus domestica MDP0000525933 I 0.708
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.708
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.708
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.708
Pm000004 Prunus mume Pm000004 I 0.708
Ca_25424 Cicer arietinum Ca_25424 I 0.708
30174.m009031 Ricinus communis 30174.m009031 I 0.707
F775_04303 Aegilops tauschii F775_04303 I 0.707
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.705
30068.m002623 Ricinus communis 30068.m002623 I 0.704
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.703
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.702
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.699
mgf023693m Mimulus guttatus mgf023693m I 0.699
mgf022810m Mimulus guttatus mgf022810m I 0.699
Ca_00417 Cicer arietinum Ca_00417 I 0.699
Pm030235 Prunus mume Pm030235 I 0.697
MDP0000197375 Malus domestica MDP0000197375 I 0.697
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.697
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.697
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.697
MDP0000157628 Malus domestica MDP0000157628 I 0.697
TCM_014471 Theobroma cacao TCM_014471 I 0.696
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.693
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.688
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.688
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.687
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.687
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.687
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.686
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.686
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.683
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.683
MDP0000127123 Malus domestica MDP0000127123 N 0.683
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.682
Cla005054 Citrullus lanatus Cla005054 N 0.682
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.681
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.681
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.679
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.679
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.677