MTR_4g082345 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_4g082345 T002856_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.704 0.755
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.704 0.755
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH30804 AP2 46 97

Links

Other AP2 family TFs
Other Medicago truncatula TFs

229 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ca_25424 Cicer arietinum Ca_25424 I 0.774
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.746
Ca_16397 Cicer arietinum Ca_16397 I 0.746
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.746
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.746
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.746
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.744
TCM_005425 Theobroma cacao TCM_005425 I 0.744
Pm008788 Prunus mume Pm008788 I 0.744
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.744
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.744
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.744
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.744
MDP0000138669 Malus domestica MDP0000138669 I 0.744
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.744
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.744
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.744
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.744
mgf018851m Mimulus guttatus mgf018851m I 0.744
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.744
MDP0000133476 Malus domestica MDP0000133476 I 0.744
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.741
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.741
30174.m008961 Ricinus communis 30174.m008961 I 0.740
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.739
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.739
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.739
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.737
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.737
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.734
TCM_011632 Theobroma cacao TCM_011632 I 0.734
Si032213m.g Setaria italica Si032213m.g I 0.734
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.734
PK25269.1 Cannabis sativa PK25269.1 I 0.732
TCM_015579 Theobroma cacao TCM_015579 I 0.731
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.731
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.731
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.731
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.730
29813.m001543 Ricinus communis 29813.m001543 I 0.730
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.730
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.730
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.728
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.728
TCM_018659 Theobroma cacao TCM_018659 I 0.728
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.728
Pm015931 Prunus mume Pm015931 I 0.728
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.728
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.728
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.728
Ca_10494 Cicer arietinum Ca_10494 I 0.728
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.728
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.728
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.728
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.728
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.728
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.728
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.728
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.728
Si024417m.g Setaria italica Si024417m.g I 0.728
Si038848m.g Setaria italica Si038848m.g I 0.728
Cla010474 Citrullus lanatus Cla010474 I 0.728
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.728
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.728
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.728
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.728
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.728
OS12G0582900 Oryza sativa OS12G0582900 I 0.728
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.728
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.728
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.728
MDP0000551969 Malus domestica MDP0000551969 I 0.728
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.728
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.728
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.728
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.728
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.728
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.728
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.728
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.728
MDP0000276536 Malus domestica MDP0000276536 I 0.728
OBART12G17080 Oryza barthii OBART12G17080 I 0.728
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.728
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.728
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.728
PK13330.1 Cannabis sativa PK13330.1 I 0.728
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.728
29635.m000461 Ricinus communis 29635.m000461 I 0.728
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.728
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.728
F775_02727 Aegilops tauschii F775_02727 I 0.728
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.728
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.728
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.728
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.728
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.728
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.727
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.727
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.727
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.727
30068.m002623 Ricinus communis 30068.m002623 I 0.726
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.724
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.723
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.723
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.723
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.723
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.721
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.721
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.720
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.720
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.719
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.719
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.718
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.718
Cla021590 Citrullus lanatus Cla021590 I 0.717
30174.m009031 Ricinus communis 30174.m009031 I 0.717
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.717
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.717
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.716
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.714
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.713
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.713
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.713
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.713
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.713
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.710
Pm030235 Prunus mume Pm030235 I 0.710
MDP0000157628 Malus domestica MDP0000157628 I 0.710
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.710
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.710
MDP0000197375 Malus domestica MDP0000197375 I 0.710
OB09G23520 Oryza brachyantha OB09G23520 I 0.708
mgf022665m Mimulus guttatus mgf022665m I 0.707
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.707
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.706
MDP0000127123 Malus domestica MDP0000127123 N 0.706
TCM_014471 Theobroma cacao TCM_014471 I 0.706
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.706
Pm000004 Prunus mume Pm000004 I 0.706
MDP0000525933 Malus domestica MDP0000525933 I 0.706
PK28640.1 Cannabis sativa PK28640.1 I 0.705
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.705
MDP0000177547 Malus domestica MDP0000177547 I 0.704
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.704
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.704
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.704
OBART07G06690 Oryza barthii OBART07G06690 I 0.704
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.704
OB07G15030 Oryza brachyantha OB07G15030 I 0.704
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.704
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.704
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.704
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.704
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.704
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.704
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.704
OS07G0204000 Oryza sativa OS07G0204000 I 0.704
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.704
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.704
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.704
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.704
Bo3g013830 Brassica oleracea Bo3g013830 I 0.704
Bo9g152440 Brassica oleracea Bo9g152440 I 0.704
Bo2g018360 Brassica oleracea Bo2g018360 I 0.704
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.704
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.704
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.704
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.704
Bra002262 Brassica rapa Bra002262 I 0.704
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.704
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.704
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.704
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.704
Bra006518 Brassica rapa Bra006518 I 0.704
Bra020063 Brassica rapa Bra020063 I 0.704
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.704
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.704
Cla005054 Citrullus lanatus Cla005054 N 0.704
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.704
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.704
TCM_040015 Theobroma cacao TCM_040015 I 0.704
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.704
Cla012318 Citrullus lanatus Cla012318 I 0.704
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.704
30084.m000185 Ricinus communis 30084.m000185 I 0.704
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.704
Pm025326 Prunus mume Pm025326 I 0.704
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.704
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.704
TCM_025913 Theobroma cacao TCM_025913 I 0.704
Ca_08232 Cicer arietinum Ca_08232 I 0.704
Si033237m.g Setaria italica Si033237m.g I 0.704
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.703
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.703
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.703
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.701
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.701
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.700
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.700
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.699
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.698
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.698
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.698
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.698
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.698
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.698
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.698
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.698
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.698
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.696
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.695
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.695
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.694
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.694
Ca_00417 Cicer arietinum Ca_00417 I 0.694
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.692
F775_04303 Aegilops tauschii F775_04303 I 0.690
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.690
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.690
MDP0000316843 Malus domestica MDP0000316843 N 0.689
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.684
mgf024137m Mimulus guttatus mgf024137m N 0.684
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.681
mgf023693m Mimulus guttatus mgf023693m I 0.680
mgf022810m Mimulus guttatus mgf022810m I 0.680
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.679
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.679
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.678
Si027288m.g Setaria italica Si027288m.g I 0.677