Eucgr.B03605 (Eucalyptus grandis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Eucgr.B03605 T008120_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.817 0.960
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.817 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.B03605.1 AP2 40 90

Links

Other AP2 family TFs
Other Eucalyptus grandis TFs

260 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.831
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.818
OBART07G06690 Oryza barthii OBART07G06690 I 0.818
OB07G15030 Oryza brachyantha OB07G15030 I 0.818
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.818
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.818
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.818
TCM_040015 Theobroma cacao TCM_040015 I 0.818
Si033237m.g Setaria italica Si033237m.g I 0.818
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.818
OS07G0204000 Oryza sativa OS07G0204000 I 0.818
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.818
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.818
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.818
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.818
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.817
Bo2g018360 Brassica oleracea Bo2g018360 I 0.817
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.817
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.817
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.817
Bo9g152440 Brassica oleracea Bo9g152440 I 0.817
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.817
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.817
Ca_08232 Cicer arietinum Ca_08232 I 0.817
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.817
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.817
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.817
Pm025326 Prunus mume Pm025326 I 0.817
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.817
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.817
MDP0000177547 Malus domestica MDP0000177547 I 0.817
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.817
30084.m000185 Ricinus communis 30084.m000185 I 0.817
Bra006518 Brassica rapa Bra006518 I 0.817
Bra002262 Brassica rapa Bra002262 I 0.817
Bo3g013830 Brassica oleracea Bo3g013830 I 0.817
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.817
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.817
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.817
TCM_025913 Theobroma cacao TCM_025913 I 0.817
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.817
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.817
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.817
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.817
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.817
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.817
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.817
Bra020063 Brassica rapa Bra020063 I 0.817
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.815
mgf022665m Mimulus guttatus mgf022665m I 0.814
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.813
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.813
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.812
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.811
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.809
OS12G0582900 Oryza sativa OS12G0582900 I 0.808
Si024417m.g Setaria italica Si024417m.g I 0.808
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.808
Si038848m.g Setaria italica Si038848m.g I 0.808
Pm015931 Prunus mume Pm015931 I 0.808
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.808
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.808
TCM_018659 Theobroma cacao TCM_018659 I 0.808
PK13330.1 Cannabis sativa PK13330.1 I 0.808
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.808
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.808
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.808
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.808
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.808
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.808
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.808
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.808
Ca_10494 Cicer arietinum Ca_10494 I 0.808
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.808
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.808
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.808
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.808
Cla010474 Citrullus lanatus Cla010474 I 0.808
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.808
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.808
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.808
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.808
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.808
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.808
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.808
MDP0000551969 Malus domestica MDP0000551969 I 0.808
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.808
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.808
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.808
F775_02727 Aegilops tauschii F775_02727 I 0.808
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.808
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.808
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.808
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.808
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.808
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.808
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.808
MDP0000276536 Malus domestica MDP0000276536 I 0.808
OBART12G17080 Oryza barthii OBART12G17080 I 0.808
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.808
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.808
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.808
29635.m000461 Ricinus communis 29635.m000461 I 0.808
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.808
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.808
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.808
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.806
29813.m001543 Ricinus communis 29813.m001543 I 0.806
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.806
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.806
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.805
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.805
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.805
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.805
Cla012318 Citrullus lanatus Cla012318 I 0.804
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.804
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.804
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.803
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.803
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.803
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.802
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.802
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.798
mgf022810m Mimulus guttatus mgf022810m I 0.794
mgf023693m Mimulus guttatus mgf023693m I 0.794
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.791
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.791
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.785
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.784
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.783
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.780
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.780
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.775
TCM_011632 Theobroma cacao TCM_011632 I 0.770
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.770
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.770
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.770
F775_04303 Aegilops tauschii F775_04303 I 0.769
MDP0000525933 Malus domestica MDP0000525933 I 0.767
Pm000004 Prunus mume Pm000004 I 0.767
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.767
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.766
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.760
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.758
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.756
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.754
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.754
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.753
MDP0000128326 Malus domestica MDP0000128326 I 0.750
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.749
PK25269.1 Cannabis sativa PK25269.1 I 0.748
30174.m009031 Ricinus communis 30174.m009031 I 0.747
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.745
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.743
Cla021590 Citrullus lanatus Cla021590 I 0.743
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.741
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.741
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.741
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.740
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.740
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.740
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.739
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.739
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.738
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.737
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.737
mgf018851m Mimulus guttatus mgf018851m I 0.737
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.737
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.737
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.737
TCM_005425 Theobroma cacao TCM_005425 I 0.737
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.737
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.737
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.737
MDP0000133476 Malus domestica MDP0000133476 I 0.737
MDP0000138669 Malus domestica MDP0000138669 I 0.737
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.737
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.737
Pm008788 Prunus mume Pm008788 I 0.737
Si032213m.g Setaria italica Si032213m.g I 0.736
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.736
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.736
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.735
OB09G23520 Oryza brachyantha OB09G23520 I 0.735
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.735
30174.m008961 Ricinus communis 30174.m008961 I 0.733
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.731
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.730
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.730
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.729
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.729
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.723
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.723
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.722
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.722
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.722
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.721
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.721
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.721
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.720
Pm030235 Prunus mume Pm030235 I 0.720
MDP0000157628 Malus domestica MDP0000157628 I 0.720
MDP0000197375 Malus domestica MDP0000197375 I 0.720
Ca_25424 Cicer arietinum Ca_25424 I 0.718
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.718
TCM_014471 Theobroma cacao TCM_014471 I 0.717
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.716
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.716
Ca_16397 Cicer arietinum Ca_16397 I 0.716
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.716
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.715
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.715
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.712
Ca_00417 Cicer arietinum Ca_00417 I 0.709
Si030686m.g Setaria italica Si030686m.g I 0.708
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.708
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.708
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.708
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.708
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.708
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.706
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.706
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.706
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.706
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.706
OBART07G19610 Oryza barthii OBART07G19610 I 0.706
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.706
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.706
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.706
OS07G0575000 Oryza sativa OS07G0575000 I 0.706
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.706
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.703
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.702
PK28640.1 Cannabis sativa PK28640.1 I 0.701
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.700
TCM_015579 Theobroma cacao TCM_015579 I 0.698
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.698
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.698
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.698
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.698
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.698
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.696
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.696
Si027288m.g Setaria italica Si027288m.g I 0.695
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.695
30068.m002623 Ricinus communis 30068.m002623 I 0.693
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.692
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.692
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.692
e_gw1.64.98.1 Physcomitrella patens e_gw1.64.98.1 I 0.690
e_gw1.233.44.1 Physcomitrella patens e_gw1.233.44.1 I 0.690
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.690
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.690
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.688
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.687
Ciclev10018044m.g Citrus clementina Ciclev10018044m.g I 0.685
e_gw1.195.59.1 Physcomitrella patens e_gw1.195.59.1 N 0.684
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.684
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.684
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.677