Si027288m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si027288m.g T005336_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.682 0.745
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.682 0.745
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si027288m AP2 13 64

Links

Other AP2 family TFs
Other Setaria italica TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.764
Si032213m.g Setaria italica Si032213m.g I 0.764
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.758
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.758
TCM_005425 Theobroma cacao TCM_005425 I 0.755
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.755
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.755
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.755
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.755
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.755
MDP0000138669 Malus domestica MDP0000138669 I 0.755
MDP0000133476 Malus domestica MDP0000133476 I 0.755
mgf018851m Mimulus guttatus mgf018851m I 0.755
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.755
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.755
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.755
Pm008788 Prunus mume Pm008788 I 0.755
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.755
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.754
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.754
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.754
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.752
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.752
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.752
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.752
30174.m008961 Ricinus communis 30174.m008961 I 0.751
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.745
Cla021590 Citrullus lanatus Cla021590 I 0.745
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.739
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.739
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.737
OB09G23520 Oryza brachyantha OB09G23520 I 0.736
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.733
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.727
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.726
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.726
Ca_16397 Cicer arietinum Ca_16397 I 0.723
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.723
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.723
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.723
PK25269.1 Cannabis sativa PK25269.1 I 0.722
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.719
TCM_011632 Theobroma cacao TCM_011632 I 0.719
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.706
Si024417m.g Setaria italica Si024417m.g I 0.706
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.706
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.706
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.706
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.706
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.706
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.706
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.706
Cla010474 Citrullus lanatus Cla010474 I 0.706
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.706
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.706
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.706
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.706
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.706
Pm015931 Prunus mume Pm015931 I 0.705
29635.m000461 Ricinus communis 29635.m000461 I 0.705
TCM_018659 Theobroma cacao TCM_018659 I 0.705
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.705
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.705
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.705
Si038848m.g Setaria italica Si038848m.g I 0.705
Ca_10494 Cicer arietinum Ca_10494 I 0.705
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.705
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.705
MDP0000276536 Malus domestica MDP0000276536 I 0.705
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.705
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.705
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.705
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.705
OBART12G17080 Oryza barthii OBART12G17080 I 0.705
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.705
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.705
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.705
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.705
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.705
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.705
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.705
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.705
PK13330.1 Cannabis sativa PK13330.1 I 0.705
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.705
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.705
OS12G0582900 Oryza sativa OS12G0582900 I 0.705
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.705
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.705
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.705
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.705
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.705
F775_02727 Aegilops tauschii F775_02727 I 0.705
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.705
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.705
MDP0000551969 Malus domestica MDP0000551969 I 0.705
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.703
29813.m001543 Ricinus communis 29813.m001543 I 0.703
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.703
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.703
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.701
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.699
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.699
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.698
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.695
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.695
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.695
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.695
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.695
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.695
F775_04303 Aegilops tauschii F775_04303 I 0.693
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.692
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.691
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.691
TCM_015579 Theobroma cacao TCM_015579 I 0.691
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.691
30068.m002623 Ricinus communis 30068.m002623 I 0.689
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.689
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.688
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.687
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.687
MDP0000525933 Malus domestica MDP0000525933 I 0.684
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.684
Pm000004 Prunus mume Pm000004 I 0.684
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.682
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.682
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.682
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.682
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.682
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.682
MDP0000177547 Malus domestica MDP0000177547 I 0.682
TCM_040015 Theobroma cacao TCM_040015 I 0.682
OB07G15030 Oryza brachyantha OB07G15030 I 0.682
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.682
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.682
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.682
OBART07G06690 Oryza barthii OBART07G06690 I 0.682
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.682
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.682
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.682
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.682
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.682
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.682
Bo2g018360 Brassica oleracea Bo2g018360 I 0.682
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.682
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.682
Bo3g013830 Brassica oleracea Bo3g013830 I 0.682
Bo9g152440 Brassica oleracea Bo9g152440 I 0.682
Bra020063 Brassica rapa Bra020063 I 0.682
Bra006518 Brassica rapa Bra006518 I 0.682
Bra002262 Brassica rapa Bra002262 I 0.682
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.682
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.682
Ca_08232 Cicer arietinum Ca_08232 I 0.682
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.682
Pm025326 Prunus mume Pm025326 I 0.682
30084.m000185 Ricinus communis 30084.m000185 I 0.682
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.682
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.682
OS07G0204000 Oryza sativa OS07G0204000 I 0.682
TCM_025913 Theobroma cacao TCM_025913 I 0.682
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.682
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.682
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.682
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.682
Si033237m.g Setaria italica Si033237m.g I 0.681
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.681
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.681
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.681
mgf022665m Mimulus guttatus mgf022665m I 0.680
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.680
Ca_00417 Cicer arietinum Ca_00417 I 0.680
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.679
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.677
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.677
Ca_25424 Cicer arietinum Ca_25424 I 0.677