Solyc02g067020.1 (Solanum lycopersicum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Solyc02g067020.1 T005413_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.803 0.882
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.803 0.882
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g067020.1.1 AP2 18 69

Links

Other AP2 family TFs
Other Solanum lycopersicum TFs

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.818
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.818
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.817
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.816
Pm015931 Prunus mume Pm015931 I 0.809
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.809
Cla010474 Citrullus lanatus Cla010474 I 0.809
Ca_10494 Cicer arietinum Ca_10494 I 0.809
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.809
29635.m000461 Ricinus communis 29635.m000461 I 0.809
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.809
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.809
OS12G0582900 Oryza sativa OS12G0582900 I 0.809
OBART12G17080 Oryza barthii OBART12G17080 I 0.809
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.809
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.809
TCM_018659 Theobroma cacao TCM_018659 I 0.809
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.809
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.809
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.809
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.809
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.809
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.809
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.809
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.809
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.809
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.809
Si038848m.g Setaria italica Si038848m.g I 0.809
Si024417m.g Setaria italica Si024417m.g I 0.809
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.809
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.809
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.809
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.809
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.809
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.809
MDP0000551969 Malus domestica MDP0000551969 I 0.809
MDP0000276536 Malus domestica MDP0000276536 I 0.809
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.809
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.809
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.809
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.809
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.809
PK13330.1 Cannabis sativa PK13330.1 I 0.809
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.809
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.809
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.809
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.809
F775_02727 Aegilops tauschii F775_02727 I 0.809
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.809
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.809
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.809
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.809
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.809
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.809
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.807
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.807
29813.m001543 Ricinus communis 29813.m001543 I 0.807
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.807
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.805
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.804
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.804
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.803
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.803
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.803
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.803
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.803
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.803
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.803
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.803
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.803
Si033237m.g Setaria italica Si033237m.g I 0.803
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.803
Ca_08232 Cicer arietinum Ca_08232 I 0.803
30084.m000185 Ricinus communis 30084.m000185 I 0.803
Pm025326 Prunus mume Pm025326 I 0.803
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.803
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.803
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.803
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.803
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.803
TCM_040015 Theobroma cacao TCM_040015 I 0.803
MDP0000177547 Malus domestica MDP0000177547 I 0.803
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.803
TCM_025913 Theobroma cacao TCM_025913 I 0.803
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.803
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.803
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.803
Bra006518 Brassica rapa Bra006518 I 0.803
Bra002262 Brassica rapa Bra002262 I 0.803
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.803
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.803
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.803
OBART07G06690 Oryza barthii OBART07G06690 I 0.803
OB07G15030 Oryza brachyantha OB07G15030 I 0.803
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.803
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.803
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.803
Bra020063 Brassica rapa Bra020063 I 0.803
Bo2g018360 Brassica oleracea Bo2g018360 I 0.803
Bo9g152440 Brassica oleracea Bo9g152440 I 0.803
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.803
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.803
OS07G0204000 Oryza sativa OS07G0204000 I 0.803
Bo3g013830 Brassica oleracea Bo3g013830 I 0.803
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.803
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.802
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.802
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.802
mgf022665m Mimulus guttatus mgf022665m I 0.801
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.799
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.799
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.798
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.797
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.797
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.795
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.794
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.791
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.790
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.790
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.790
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.790
Cla012318 Citrullus lanatus Cla012318 I 0.790
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.790
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.789
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.786
mgf023693m Mimulus guttatus mgf023693m I 0.779
mgf022810m Mimulus guttatus mgf022810m I 0.779
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.777
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.775
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.772
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.771
TCM_011632 Theobroma cacao TCM_011632 I 0.771
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.770
F775_04303 Aegilops tauschii F775_04303 I 0.770
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.769
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.768
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.768
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.756
MDP0000128326 Malus domestica MDP0000128326 I 0.754
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.754
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.753
Pm000004 Prunus mume Pm000004 I 0.753
MDP0000525933 Malus domestica MDP0000525933 I 0.753
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.752
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.752
PK25269.1 Cannabis sativa PK25269.1 I 0.747
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.745
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.744
30174.m009031 Ricinus communis 30174.m009031 I 0.743
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.741
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.741
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.741
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.741
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.741
Cla021590 Citrullus lanatus Cla021590 I 0.741
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.740
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.739
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.739
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.737
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.737
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.737
Si032213m.g Setaria italica Si032213m.g I 0.736
OB09G23520 Oryza brachyantha OB09G23520 I 0.736
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.736
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.735
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.735
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.734
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.734
mgf018851m Mimulus guttatus mgf018851m I 0.734
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.734
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.734
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.734
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.734
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.734
Pm008788 Prunus mume Pm008788 I 0.734
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.734
MDP0000133476 Malus domestica MDP0000133476 I 0.734
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.734
TCM_005425 Theobroma cacao TCM_005425 I 0.734
MDP0000138669 Malus domestica MDP0000138669 I 0.734
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.734
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.733
30174.m008961 Ricinus communis 30174.m008961 I 0.731
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.730
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.730
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.727
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.727
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.727
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.725
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.722
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.722
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.722
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.721
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.721
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.721
Ca_25424 Cicer arietinum Ca_25424 I 0.719
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.718
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.718
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.717
MDP0000197375 Malus domestica MDP0000197375 I 0.717
MDP0000157628 Malus domestica MDP0000157628 I 0.717
Pm030235 Prunus mume Pm030235 I 0.717
Ca_16397 Cicer arietinum Ca_16397 I 0.714
TCM_014471 Theobroma cacao TCM_014471 I 0.714
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.714
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.714
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.714
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.712
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.708
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.708
Ca_00417 Cicer arietinum Ca_00417 I 0.708
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.706
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.706
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.705
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.705
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.701
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.701
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.700
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.700
TCM_015579 Theobroma cacao TCM_015579 I 0.700
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.700
PK28640.1 Cannabis sativa PK28640.1 I 0.700
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.697
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.697
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.697
Si027288m.g Setaria italica Si027288m.g I 0.695
30068.m002623 Ricinus communis 30068.m002623 I 0.695
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.693
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.693
Si030686m.g Setaria italica Si030686m.g I 0.692
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.692
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.692
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.691
OBART07G19610 Oryza barthii OBART07G19610 I 0.691
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.691
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.691
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.691
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.691
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.691
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.691
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.691
OS07G0575000 Oryza sativa OS07G0575000 I 0.691
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.691
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.690
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.690
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.689
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.689
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.687
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.687
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.686
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.685
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.685
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.684
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.684
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.683
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.683
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.681
e_gw1.64.98.1 Physcomitrella patens e_gw1.64.98.1 I 0.680
e_gw1.233.44.1 Physcomitrella patens e_gw1.233.44.1 I 0.680
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.679
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.677