AMTR_s00069p00132820 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00069p00132820 T000376_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.725 0.765
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.725 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN19372 AP2 22 73

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

262 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.815
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.815
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.815
mgf018851m Mimulus guttatus mgf018851m I 0.815
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.815
MDP0000133476 Malus domestica MDP0000133476 I 0.815
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.815
MDP0000138669 Malus domestica MDP0000138669 I 0.815
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.815
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.815
TCM_005425 Theobroma cacao TCM_005425 I 0.815
Pm008788 Prunus mume Pm008788 I 0.815
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.815
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.815
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.812
30174.m008961 Ricinus communis 30174.m008961 I 0.811
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.809
Si032213m.g Setaria italica Si032213m.g I 0.809
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.803
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.803
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.799
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.799
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.799
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.799
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.799
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.797
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.797
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.797
Cla021590 Citrullus lanatus Cla021590 I 0.789
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.789
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.788
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.788
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.788
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.788
Ca_16397 Cicer arietinum Ca_16397 I 0.788
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.787
PK25269.1 Cannabis sativa PK25269.1 I 0.775
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.772
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.772
OB09G23520 Oryza brachyantha OB09G23520 I 0.764
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.758
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.758
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.756
Si027288m.g Setaria italica Si027288m.g I 0.752
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.746
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.746
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.746
Ca_25424 Cicer arietinum Ca_25424 I 0.746
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.746
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.746
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.746
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.746
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.746
30174.m009031 Ricinus communis 30174.m009031 I 0.746
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.746
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.746
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.746
Cla010474 Citrullus lanatus Cla010474 I 0.746
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.746
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.746
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.746
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.746
TCM_015579 Theobroma cacao TCM_015579 I 0.746
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.746
TCM_011632 Theobroma cacao TCM_011632 I 0.746
Si024417m.g Setaria italica Si024417m.g I 0.746
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.745
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.745
TCM_018659 Theobroma cacao TCM_018659 I 0.745
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.745
F775_02727 Aegilops tauschii F775_02727 I 0.745
MDP0000551969 Malus domestica MDP0000551969 I 0.745
Pm015931 Prunus mume Pm015931 I 0.745
Si038848m.g Setaria italica Si038848m.g I 0.745
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.745
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.745
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.745
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.745
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.745
Ca_10494 Cicer arietinum Ca_10494 I 0.745
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.745
29635.m000461 Ricinus communis 29635.m000461 I 0.745
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.745
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.745
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.745
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.745
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.745
PK13330.1 Cannabis sativa PK13330.1 I 0.745
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.745
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.745
OBART12G17080 Oryza barthii OBART12G17080 I 0.745
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.745
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.745
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.745
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.745
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.745
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.745
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.745
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.745
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.745
MDP0000276536 Malus domestica MDP0000276536 I 0.745
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.745
OS12G0582900 Oryza sativa OS12G0582900 I 0.745
30068.m002623 Ricinus communis 30068.m002623 I 0.744
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.743
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.743
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.743
29813.m001543 Ricinus communis 29813.m001543 I 0.743
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.741
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.741
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.741
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.741
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.739
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.739
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.738
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.738
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.738
Ca_00417 Cicer arietinum Ca_00417 I 0.737
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.737
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.736
Pm030235 Prunus mume Pm030235 I 0.736
MDP0000197375 Malus domestica MDP0000197375 I 0.736
MDP0000157628 Malus domestica MDP0000157628 I 0.736
TCM_014471 Theobroma cacao TCM_014471 I 0.735
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.735
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.735
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.735
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.734
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.733
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.733
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.731
mgf022665m Mimulus guttatus mgf022665m I 0.728
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.726
OB07G15030 Oryza brachyantha OB07G15030 I 0.725
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.725
OBART07G06690 Oryza barthii OBART07G06690 I 0.725
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.725
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.725
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.725
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.725
OS07G0204000 Oryza sativa OS07G0204000 I 0.725
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.725
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.725
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.725
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.725
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.725
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.725
Bo9g152440 Brassica oleracea Bo9g152440 I 0.725
Bra002262 Brassica rapa Bra002262 I 0.725
Bra006518 Brassica rapa Bra006518 I 0.725
Bo3g013830 Brassica oleracea Bo3g013830 I 0.725
Bo2g018360 Brassica oleracea Bo2g018360 I 0.725
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.725
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.725
Bra020063 Brassica rapa Bra020063 I 0.725
MDP0000177547 Malus domestica MDP0000177547 I 0.725
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.725
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.725
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.725
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.725
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.725
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.725
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.725
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.725
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.725
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.725
30084.m000185 Ricinus communis 30084.m000185 I 0.725
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.725
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.725
TCM_040015 Theobroma cacao TCM_040015 I 0.725
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.725
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.725
Pm025326 Prunus mume Pm025326 I 0.725
Ca_08232 Cicer arietinum Ca_08232 I 0.725
TCM_025913 Theobroma cacao TCM_025913 I 0.725
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.724
Si033237m.g Setaria italica Si033237m.g I 0.724
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.723
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.722
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.722
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.721
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.720
MDP0000127123 Malus domestica MDP0000127123 N 0.720
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.720
Cla005054 Citrullus lanatus Cla005054 N 0.719
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.719
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.719
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.718
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.717
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.717
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.716
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.716
Pm000004 Prunus mume Pm000004 I 0.714
PK28640.1 Cannabis sativa PK28640.1 I 0.714
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.714
MDP0000525933 Malus domestica MDP0000525933 I 0.714
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.713
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.713
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.713
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.713
Cla012318 Citrullus lanatus Cla012318 I 0.712
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.712
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.711
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.711
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.711
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.711
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.711
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.711
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.709
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.708
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.708
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.708
F775_04303 Aegilops tauschii F775_04303 I 0.706
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.705
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.705
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.705
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.705
MDP0000316843 Malus domestica MDP0000316843 N 0.704
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.703
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.703
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.703
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.702
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.702
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.702
mgf023693m Mimulus guttatus mgf023693m I 0.701
mgf022810m Mimulus guttatus mgf022810m I 0.701
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.701
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.700
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.699
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.695
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.695
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.695
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.694
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.691
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.690
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.690
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.688
mgf024137m Mimulus guttatus mgf024137m N 0.688
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.688
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.685
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.685
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.683
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.682
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.682
Si030686m.g Setaria italica Si030686m.g I 0.681
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.681
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.681
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.681
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.680
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.679
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.678
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.677
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.677
OBART07G19610 Oryza barthii OBART07G19610 I 0.677
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.677
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.677
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.677
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.677
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.677
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.677
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.677
OS07G0575000 Oryza sativa OS07G0575000 I 0.677