evm.TU.supercontig_51.136 (Carica papaya)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 evm.TU.supercontig_51.136 T008311_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.831 0.980
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.831 0.980
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_51.136 AP2 40 91

Links

Other AP2 family TFs
Other Carica papaya TFs

253 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCM_025913 Theobroma cacao TCM_025913 I 0.833
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.833
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.833
MDP0000177547 Malus domestica MDP0000177547 I 0.833
Pm025326 Prunus mume Pm025326 I 0.833
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.833
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.833
Ca_08232 Cicer arietinum Ca_08232 I 0.833
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.833
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.833
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.833
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.833
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.833
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.833
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.831
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.831
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.831
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.831
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.831
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.831
OBART07G06690 Oryza barthii OBART07G06690 I 0.831
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.831
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.831
OB07G15030 Oryza brachyantha OB07G15030 I 0.831
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.831
30084.m000185 Ricinus communis 30084.m000185 I 0.831
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.831
TCM_040015 Theobroma cacao TCM_040015 I 0.831
Bra002262 Brassica rapa Bra002262 I 0.831
Bra006518 Brassica rapa Bra006518 I 0.831
Bo3g013830 Brassica oleracea Bo3g013830 I 0.831
Bo2g018360 Brassica oleracea Bo2g018360 I 0.831
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.831
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.831
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.831
Bra020063 Brassica rapa Bra020063 I 0.831
Bo9g152440 Brassica oleracea Bo9g152440 I 0.831
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.831
OS07G0204000 Oryza sativa OS07G0204000 I 0.831
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.830
mgf022665m Mimulus guttatus mgf022665m I 0.830
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.829
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.828
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.828
Si033237m.g Setaria italica Si033237m.g I 0.828
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.827
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.826
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.826
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.825
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.823
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.822
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.821
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.820
Cla012318 Citrullus lanatus Cla012318 I 0.820
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.818
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.818
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.818
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.818
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.817
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.816
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.807
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.805
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.805
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.803
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.799
Si024417m.g Setaria italica Si024417m.g I 0.799
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.799
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.799
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.799
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.799
Cla010474 Citrullus lanatus Cla010474 I 0.799
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.799
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.799
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.799
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.799
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.799
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.799
Si038848m.g Setaria italica Si038848m.g I 0.796
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.796
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.796
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.796
PK13330.1 Cannabis sativa PK13330.1 I 0.796
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.796
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.796
29635.m000461 Ricinus communis 29635.m000461 I 0.796
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.796
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.796
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.796
Pm015931 Prunus mume Pm015931 I 0.796
MDP0000276536 Malus domestica MDP0000276536 I 0.796
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.796
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.796
MDP0000551969 Malus domestica MDP0000551969 I 0.796
Ca_10494 Cicer arietinum Ca_10494 I 0.796
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.796
TCM_018659 Theobroma cacao TCM_018659 I 0.796
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.796
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.796
OBART12G17080 Oryza barthii OBART12G17080 I 0.796
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.796
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.796
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.796
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.796
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.796
OS12G0582900 Oryza sativa OS12G0582900 I 0.796
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.796
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.796
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.796
F775_02727 Aegilops tauschii F775_02727 I 0.796
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.796
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.796
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.796
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.796
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.796
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.794
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.794
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.794
29813.m001543 Ricinus communis 29813.m001543 I 0.794
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.794
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.794
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.792
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.790
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.790
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.786
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.786
mgf022810m Mimulus guttatus mgf022810m I 0.784
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.784
mgf023693m Mimulus guttatus mgf023693m I 0.784
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.782
Pm000004 Prunus mume Pm000004 I 0.780
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.780
MDP0000525933 Malus domestica MDP0000525933 I 0.780
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.779
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.779
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.778
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.778
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.776
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.773
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.767
MDP0000128326 Malus domestica MDP0000128326 I 0.766
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.766
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.759
TCM_011632 Theobroma cacao TCM_011632 I 0.758
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.758
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.758
F775_04303 Aegilops tauschii F775_04303 I 0.757
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.750
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.750
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.748
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.747
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.747
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.746
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.741
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.738
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.737
PK25269.1 Cannabis sativa PK25269.1 I 0.735
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.734
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.734
30174.m009031 Ricinus communis 30174.m009031 I 0.733
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.733
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.731
Cla021590 Citrullus lanatus Cla021590 I 0.731
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.728
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.728
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.728
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.727
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.727
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.727
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.726
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.726
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.726
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.725
TCM_005425 Theobroma cacao TCM_005425 I 0.724
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.724
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.724
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.724
MDP0000138669 Malus domestica MDP0000138669 I 0.724
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.724
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.724
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.724
Pm008788 Prunus mume Pm008788 I 0.724
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.724
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.724
mgf018851m Mimulus guttatus mgf018851m I 0.724
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.724
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.724
MDP0000133476 Malus domestica MDP0000133476 I 0.724
OB09G23520 Oryza brachyantha OB09G23520 I 0.723
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.723
Si032213m.g Setaria italica Si032213m.g I 0.723
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.722
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.721
30174.m008961 Ricinus communis 30174.m008961 I 0.720
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.718
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.718
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.718
Si030686m.g Setaria italica Si030686m.g I 0.718
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.718
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.718
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.717
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.717
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.717
OS07G0575000 Oryza sativa OS07G0575000 I 0.716
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.716
OBART07G19610 Oryza barthii OBART07G19610 I 0.716
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.716
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.716
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.716
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.716
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.716
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.716
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.716
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.716
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.716
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.715
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.711
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.711
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.708
Ca_25424 Cicer arietinum Ca_25424 I 0.706
Pm030235 Prunus mume Pm030235 I 0.705
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.705
MDP0000197375 Malus domestica MDP0000197375 I 0.705
MDP0000157628 Malus domestica MDP0000157628 I 0.705
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.704
Ca_16397 Cicer arietinum Ca_16397 I 0.704
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.704
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.704
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.704
TCM_014471 Theobroma cacao TCM_014471 I 0.703
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.702
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.702
Ca_00417 Cicer arietinum Ca_00417 I 0.698
Ciclev10018044m.g Citrus clementina Ciclev10018044m.g I 0.698
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.694
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.694
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.688
TCM_015579 Theobroma cacao TCM_015579 I 0.687
PK28640.1 Cannabis sativa PK28640.1 I 0.687
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.687
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.687
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.687
MDP0000172804 Malus domestica MDP0000172804 I 0.685
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.684
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.684
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.683
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.683
Si027288m.g Setaria italica Si027288m.g I 0.682
30068.m002623 Ricinus communis 30068.m002623 I 0.681
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.679
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.678
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.678
e_gw1.233.44.1 Physcomitrella patens e_gw1.233.44.1 I 0.677
e_gw1.64.98.1 Physcomitrella patens e_gw1.64.98.1 I 0.677