MLOC_18783 (Hordeum vulgare)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MLOC_18783 T002690_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.780 0.902
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.780 0.902
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_18783.1 AP2 31 82

Links

Other AP2 family TFs
Other Hordeum vulgare TFs

214 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.843
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.804
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.804
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.792
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.784
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.781
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.781
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.780
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.780
OS07G0204000 Oryza sativa OS07G0204000 I 0.780
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.780
OB07G15030 Oryza brachyantha OB07G15030 I 0.780
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.780
30084.m000185 Ricinus communis 30084.m000185 I 0.780
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.780
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.780
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.780
TCM_040015 Theobroma cacao TCM_040015 I 0.780
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.780
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.780
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.780
OBART07G06690 Oryza barthii OBART07G06690 I 0.780
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.780
Bra020063 Brassica rapa Bra020063 I 0.780
Bo2g018360 Brassica oleracea Bo2g018360 I 0.780
Bra006518 Brassica rapa Bra006518 I 0.780
Bo9g152440 Brassica oleracea Bo9g152440 I 0.780
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.780
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.780
Bra002262 Brassica rapa Bra002262 I 0.780
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.780
Bo3g013830 Brassica oleracea Bo3g013830 I 0.780
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.779
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.779
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.779
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.779
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.779
TCM_025913 Theobroma cacao TCM_025913 I 0.779
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.779
Ca_08232 Cicer arietinum Ca_08232 I 0.779
Pm025326 Prunus mume Pm025326 I 0.779
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.779
MDP0000177547 Malus domestica MDP0000177547 I 0.779
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.779
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.779
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.779
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.779
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.777
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.777
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.777
mgf022665m Mimulus guttatus mgf022665m I 0.777
Si033237m.g Setaria italica Si033237m.g I 0.777
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.777
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.777
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.776
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.776
Cla012318 Citrullus lanatus Cla012318 I 0.776
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.776
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.776
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.776
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.775
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.775
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.775
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.773
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.773
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.771
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.771
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.770
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.770
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.766
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.754
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.754
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.754
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.753
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.752
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.748
Cla010474 Citrullus lanatus Cla010474 I 0.748
Si024417m.g Setaria italica Si024417m.g I 0.748
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.748
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.748
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.748
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.748
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.748
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.748
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.748
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.748
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.748
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.748
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.745
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.745
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.745
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.745
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.745
TCM_018659 Theobroma cacao TCM_018659 I 0.745
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.745
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.745
Pm015931 Prunus mume Pm015931 I 0.745
OBART12G17080 Oryza barthii OBART12G17080 I 0.745
29635.m000461 Ricinus communis 29635.m000461 I 0.745
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.745
Pm000004 Prunus mume Pm000004 I 0.745
Ca_10494 Cicer arietinum Ca_10494 I 0.745
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.745
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.745
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.745
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.745
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.745
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.745
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.745
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.745
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.745
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.745
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.745
F775_02727 Aegilops tauschii F775_02727 I 0.745
PK13330.1 Cannabis sativa PK13330.1 I 0.745
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.745
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.745
OS12G0582900 Oryza sativa OS12G0582900 I 0.745
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.745
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.745
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.745
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.745
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.745
Si038848m.g Setaria italica Si038848m.g I 0.745
MDP0000276536 Malus domestica MDP0000276536 I 0.745
MDP0000525933 Malus domestica MDP0000525933 I 0.745
MDP0000551969 Malus domestica MDP0000551969 I 0.745
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.745
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.744
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.743
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.743
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.743
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.743
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.743
29813.m001543 Ricinus communis 29813.m001543 I 0.743
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.741
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.739
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.739
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.739
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.735
mgf022810m Mimulus guttatus mgf022810m I 0.734
mgf023693m Mimulus guttatus mgf023693m I 0.734
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.733
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.731
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.731
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.727
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.725
Ca_00417 Cicer arietinum Ca_00417 I 0.724
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.716
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.715
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.715
PK28640.1 Cannabis sativa PK28640.1 I 0.714
MDP0000128326 Malus domestica MDP0000128326 I 0.712
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.711
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.709
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.708
TCM_011632 Theobroma cacao TCM_011632 I 0.707
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.707
F775_04303 Aegilops tauschii F775_04303 I 0.706
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.705
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.703
MDP0000127123 Malus domestica MDP0000127123 N 0.702
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.701
mgf024137m Mimulus guttatus mgf024137m N 0.701
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.697
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.697
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.697
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.697
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.697
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.697
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.697
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.696
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.696
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.694
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.694
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.693
PGSC0003DMG400008352 Solanum tuberosum PGSC0003DMG400008352 N 0.693
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.693
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.692
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.692
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.690
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.689
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.689
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.689
Si030686m.g Setaria italica Si030686m.g I 0.689
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.688
MDP0000316843 Malus domestica MDP0000316843 N 0.688
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.687
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.687
OBART07G19610 Oryza barthii OBART07G19610 I 0.687
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.687
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.687
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.687
OS07G0575000 Oryza sativa OS07G0575000 I 0.687
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.687
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.687
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.687
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.687
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.684
PK25269.1 Cannabis sativa PK25269.1 I 0.684
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.683
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.683
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.682
30174.m009031 Ricinus communis 30174.m009031 I 0.682
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.681
Ca_06590 Cicer arietinum Ca_06590 N 0.680
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.680
Cla021590 Citrullus lanatus Cla021590 I 0.680
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.679
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.678
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.678
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.677
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.677
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.677