PK25269.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK25269.1 T010103_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.735 0.765
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.735 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK25269.1 AP2 18 69

Links

Other AP2 family TFs
Other Cannabis sativa TFs

268 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si032213m.g Setaria italica Si032213m.g I 0.779
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.779
mgf018851m Mimulus guttatus mgf018851m I 0.778
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.778
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.778
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.778
TCM_005425 Theobroma cacao TCM_005425 I 0.778
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.778
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.778
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.778
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.778
Pm008788 Prunus mume Pm008788 I 0.778
MDP0000138669 Malus domestica MDP0000138669 I 0.778
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.778
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.778
MDP0000133476 Malus domestica MDP0000133476 I 0.778
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.777
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.775
30174.m008961 Ricinus communis 30174.m008961 I 0.774
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.773
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.773
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.769
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.769
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.769
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.767
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.767
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.764
TCM_015579 Theobroma cacao TCM_015579 I 0.764
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.764
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.764
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.763
TCM_011632 Theobroma cacao TCM_011632 I 0.763
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.762
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.762
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.762
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.762
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.761
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.761
OS12G0582900 Oryza sativa OS12G0582900 I 0.761
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.761
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.761
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.761
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.761
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.761
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.761
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.761
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.761
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.761
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.761
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.761
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.761
Ca_10494 Cicer arietinum Ca_10494 I 0.761
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.761
Pm015931 Prunus mume Pm015931 I 0.761
TCM_018659 Theobroma cacao TCM_018659 I 0.761
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.761
MDP0000276536 Malus domestica MDP0000276536 I 0.761
MDP0000551969 Malus domestica MDP0000551969 I 0.761
29635.m000461 Ricinus communis 29635.m000461 I 0.761
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.761
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.761
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.761
Si038848m.g Setaria italica Si038848m.g I 0.761
PK13330.1 Cannabis sativa PK13330.1 I 0.761
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.761
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.761
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.761
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.761
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.761
F775_02727 Aegilops tauschii F775_02727 I 0.761
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.761
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.761
OBART12G17080 Oryza barthii OBART12G17080 I 0.761
Ca_00417 Cicer arietinum Ca_00417 I 0.760
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.760
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.760
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.760
29813.m001543 Ricinus communis 29813.m001543 I 0.760
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.759
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.759
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.758
Cla010474 Citrullus lanatus Cla010474 I 0.758
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.758
Si024417m.g Setaria italica Si024417m.g I 0.758
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.758
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.758
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.758
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.758
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.758
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.758
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.758
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.758
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.758
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.758
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.758
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.758
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.757
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.757
Ca_16397 Cicer arietinum Ca_16397 I 0.757
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.757
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.757
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.756
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.756
30068.m002623 Ricinus communis 30068.m002623 I 0.753
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.753
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.753
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.752
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.752
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.752
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.751
Cla021590 Citrullus lanatus Cla021590 I 0.751
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.749
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.749
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.748
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.747
30174.m009031 Ricinus communis 30174.m009031 I 0.746
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.745
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.744
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.741
OB09G23520 Oryza brachyantha OB09G23520 I 0.741
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.739
Si033237m.g Setaria italica Si033237m.g I 0.739
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.739
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.738
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.738
Ca_25424 Cicer arietinum Ca_25424 I 0.737
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.736
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.735
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.735
Bra020063 Brassica rapa Bra020063 I 0.735
OBART07G06690 Oryza barthii OBART07G06690 I 0.735
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.735
Pm025326 Prunus mume Pm025326 I 0.735
Bo9g152440 Brassica oleracea Bo9g152440 I 0.735
30084.m000185 Ricinus communis 30084.m000185 I 0.735
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.735
Bo3g013830 Brassica oleracea Bo3g013830 I 0.735
OS07G0204000 Oryza sativa OS07G0204000 I 0.735
Bra002262 Brassica rapa Bra002262 I 0.735
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.735
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.735
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.735
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.735
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.735
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.735
Bra006518 Brassica rapa Bra006518 I 0.735
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.735
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.735
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.735
TCM_014471 Theobroma cacao TCM_014471 I 0.735
OB07G15030 Oryza brachyantha OB07G15030 I 0.735
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.735
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.735
TCM_025913 Theobroma cacao TCM_025913 I 0.735
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.735
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.735
MDP0000177547 Malus domestica MDP0000177547 I 0.735
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.735
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.735
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.735
TCM_040015 Theobroma cacao TCM_040015 I 0.735
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.735
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.735
Ca_08232 Cicer arietinum Ca_08232 I 0.735
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.735
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.735
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.735
Bo2g018360 Brassica oleracea Bo2g018360 I 0.735
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.734
Cla005054 Citrullus lanatus Cla005054 N 0.733
mgf022665m Mimulus guttatus mgf022665m I 0.733
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.733
Pm030235 Prunus mume Pm030235 I 0.733
MDP0000157628 Malus domestica MDP0000157628 I 0.733
MDP0000197375 Malus domestica MDP0000197375 I 0.733
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.733
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.733
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.733
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.733
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.732
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.732
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.732
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.731
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.731
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.731
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.731
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.730
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.730
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.728
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.727
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.727
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.725
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.725
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.725
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.724
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.724
Pm000004 Prunus mume Pm000004 I 0.724
MDP0000525933 Malus domestica MDP0000525933 I 0.724
F775_04303 Aegilops tauschii F775_04303 I 0.723
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.722
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.722
Cla012318 Citrullus lanatus Cla012318 I 0.722
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.722
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.722
Si027288m.g Setaria italica Si027288m.g I 0.722
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.722
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.721
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.720
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.720
MDP0000127123 Malus domestica MDP0000127123 N 0.718
PK28640.1 Cannabis sativa PK28640.1 I 0.717
MDP0000316843 Malus domestica MDP0000316843 N 0.716
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.715
mgf022810m Mimulus guttatus mgf022810m I 0.712
mgf023693m Mimulus guttatus mgf023693m I 0.712
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.711
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.710
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.709
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.708
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.708
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.708
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.707
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.707
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.707
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.706
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.706
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.706
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.704
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.702
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.701
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.698
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.698
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.698
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.697
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.694
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.694
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.694
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.694
mgf024137m Mimulus guttatus mgf024137m N 0.694
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.694
Traes_2BS_B1A73C7A8 Triticum aestivum Traes_2BS_B1A73C7A8 I 0.692
ONIVA07G17970 Oryza nivara ONIVA07G17970 I 0.692
OPUNC07G18550 Oryza punctata OPUNC07G18550 I 0.692
ORUFI07G20430 Oryza rufipogon ORUFI07G20430 I 0.692
OMERI07G16350 Oryza meridionalis OMERI07G16350 I 0.692
OGLUM07G19400 Oryza glumaepatula OGLUM07G19400 I 0.692
BGIOSGA024035 Oryza indica BGIOSGA024035 I 0.692
MLOC_69002 Hordeum vulgare MLOC_69002 I 0.692
OBART07G19610 Oryza barthii OBART07G19610 I 0.692
OS07G0575000 Oryza sativa OS07G0575000 I 0.692
ORGLA07G0253000 Oryza glaberrima ORGLA07G0253000 I 0.692
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.691
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.691
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.690
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.689
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.689
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.688
Si030686m.g Setaria italica Si030686m.g I 0.688
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.688
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.688
MDP0000128326 Malus domestica MDP0000128326 I 0.686
e_gw1.233.44.1 Physcomitrella patens e_gw1.233.44.1 I 0.686
e_gw1.64.98.1 Physcomitrella patens e_gw1.64.98.1 I 0.686
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.686
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.684
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.684
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.678
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.677