AMTR_s00058p00066390 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00058p00066390 T000371_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.757 0.824
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.757 0.824
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN06502 AP2 110 161

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.826
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.800
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.800
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.787
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.785
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.785
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.785
OS12G0582900 Oryza sativa OS12G0582900 I 0.785
Si038848m.g Setaria italica Si038848m.g I 0.785
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.785
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.785
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.785
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.785
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.785
OBART12G17080 Oryza barthii OBART12G17080 I 0.785
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.785
Pm015931 Prunus mume Pm015931 I 0.785
Ca_10494 Cicer arietinum Ca_10494 I 0.785
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.785
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.785
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.785
TCM_018659 Theobroma cacao TCM_018659 I 0.785
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.785
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.785
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.785
29635.m000461 Ricinus communis 29635.m000461 I 0.785
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.785
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.785
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.785
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.785
F775_02727 Aegilops tauschii F775_02727 I 0.785
MDP0000551969 Malus domestica MDP0000551969 I 0.785
MDP0000276536 Malus domestica MDP0000276536 I 0.785
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.785
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.785
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.785
PK13330.1 Cannabis sativa PK13330.1 I 0.785
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.785
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.785
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.785
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.784
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.784
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.783
29813.m001543 Ricinus communis 29813.m001543 I 0.783
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.783
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.783
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.782
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.782
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.782
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.782
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.782
Si024417m.g Setaria italica Si024417m.g I 0.782
Cla010474 Citrullus lanatus Cla010474 I 0.782
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.782
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.782
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.782
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.782
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.782
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.782
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.781
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.781
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.780
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.780
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.779
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.776
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.776
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.776
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.776
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.773
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.772
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.771
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.770
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.770
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.768
Ca_00417 Cicer arietinum Ca_00417 I 0.767
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.767
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.762
Si033237m.g Setaria italica Si033237m.g I 0.761
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.761
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.760
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.758
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.758
MDP0000177547 Malus domestica MDP0000177547 I 0.758
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.758
TCM_040015 Theobroma cacao TCM_040015 I 0.758
TCM_025913 Theobroma cacao TCM_025913 I 0.758
Ca_08232 Cicer arietinum Ca_08232 I 0.758
Pm025326 Prunus mume Pm025326 I 0.758
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.758
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.758
OB07G15030 Oryza brachyantha OB07G15030 I 0.758
OBART07G06690 Oryza barthii OBART07G06690 I 0.758
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.758
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.758
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.758
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.758
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.758
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.758
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.758
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.758
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.758
OS07G0204000 Oryza sativa OS07G0204000 I 0.758
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.758
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.758
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.758
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.758
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.758
Bo2g018360 Brassica oleracea Bo2g018360 I 0.757
30084.m000185 Ricinus communis 30084.m000185 I 0.757
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.757
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.757
Bo3g013830 Brassica oleracea Bo3g013830 I 0.757
Bra002262 Brassica rapa Bra002262 I 0.757
Bra020063 Brassica rapa Bra020063 I 0.757
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.757
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.757
Bra006518 Brassica rapa Bra006518 I 0.757
Bo9g152440 Brassica oleracea Bo9g152440 I 0.757
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.757
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.757
mgf022665m Mimulus guttatus mgf022665m I 0.755
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.755
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.755
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.754
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.754
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.752
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.751
PK28640.1 Cannabis sativa PK28640.1 I 0.750
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.749
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.747
TCM_011632 Theobroma cacao TCM_011632 I 0.747
F775_04303 Aegilops tauschii F775_04303 I 0.746
Cla012318 Citrullus lanatus Cla012318 I 0.744
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.744
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.744
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.744
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.744
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.744
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.743
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.736
mgf022810m Mimulus guttatus mgf022810m I 0.734
mgf023693m Mimulus guttatus mgf023693m I 0.734
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.732
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.732
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.730
MDP0000127123 Malus domestica MDP0000127123 N 0.728
PK25269.1 Cannabis sativa PK25269.1 I 0.728
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.728
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.728
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.727
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.727
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.726
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.726
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.726
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.726
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.726
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.723
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.723
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.722
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.722
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.722
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.721
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.721
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.720
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.720
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.719
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.719
SELMODRAFT_17708 Selaginella moellendorffii SELMODRAFT_17708 I 0.718
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.718
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.717
Cla021590 Citrullus lanatus Cla021590 I 0.717
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.717
MDP0000316843 Malus domestica MDP0000316843 N 0.717
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.716
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.714
OB09G23520 Oryza brachyantha OB09G23520 I 0.712
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.712
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.712
Si032213m.g Setaria italica Si032213m.g I 0.712
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.711
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.711
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.711
MDP0000138669 Malus domestica MDP0000138669 I 0.710
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.710
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.710
MDP0000133476 Malus domestica MDP0000133476 I 0.710
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.710
TCM_005425 Theobroma cacao TCM_005425 I 0.710
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.710
Pm008788 Prunus mume Pm008788 I 0.710
mgf018851m Mimulus guttatus mgf018851m I 0.710
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.710
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.710
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.710
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.710
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.710
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.709
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.709
mgf024137m Mimulus guttatus mgf024137m N 0.709
MDP0000128326 Malus domestica MDP0000128326 I 0.708
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.707
Pm000004 Prunus mume Pm000004 I 0.707
30174.m008961 Ricinus communis 30174.m008961 I 0.707
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.707
MDP0000525933 Malus domestica MDP0000525933 I 0.707
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.706
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.706
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.704
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.704
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.699
30174.m009031 Ricinus communis 30174.m009031 I 0.696
Ca_06590 Cicer arietinum Ca_06590 N 0.696
Ca_25424 Cicer arietinum Ca_25424 I 0.695
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.695
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.695
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.694
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.694
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.694
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.694
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.694
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.694
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.693
Ca_16397 Cicer arietinum Ca_16397 I 0.690
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.690
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.690
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.690
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.690
Pm030235 Prunus mume Pm030235 I 0.689
MDP0000197375 Malus domestica MDP0000197375 I 0.689
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.689
MDP0000157628 Malus domestica MDP0000157628 I 0.689
TCM_014471 Theobroma cacao TCM_014471 I 0.686
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.681
TCM_015579 Theobroma cacao TCM_015579 I 0.681
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.681
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.681
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.681
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.681
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.679
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.679
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.677