MTR_8g032610 (Medicago truncatula)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 MTR_8g032610 T002960_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.703 0.725
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.703 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KEH18970 AP2 25 76

Links

Other AP2 family TFs
Other Medicago truncatula TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.839
Ca_16397 Cicer arietinum Ca_16397 I 0.839
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.839
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.835
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.806
mgf018851m Mimulus guttatus mgf018851m I 0.790
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.790
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.790
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.790
Pm008788 Prunus mume Pm008788 I 0.790
TCM_005425 Theobroma cacao TCM_005425 I 0.790
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.790
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.790
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.790
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.790
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.790
MDP0000138669 Malus domestica MDP0000138669 I 0.790
MDP0000133476 Malus domestica MDP0000133476 I 0.790
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.790
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.788
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.786
30174.m008961 Ricinus communis 30174.m008961 I 0.786
Si032213m.g Setaria italica Si032213m.g I 0.780
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.780
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.774
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.774
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.774
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.774
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.772
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.772
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.770
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.770
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.770
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.768
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.768
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.763
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.763
Cla021590 Citrullus lanatus Cla021590 I 0.763
PK25269.1 Cannabis sativa PK25269.1 I 0.757
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.746
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.746
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.746
TCM_015579 Theobroma cacao TCM_015579 I 0.746
Ca_25424 Cicer arietinum Ca_25424 I 0.746
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.746
30068.m002623 Ricinus communis 30068.m002623 I 0.744
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.743
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.743
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.743
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.737
OB09G23520 Oryza brachyantha OB09G23520 I 0.735
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.735
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.729
TCM_011632 Theobroma cacao TCM_011632 I 0.729
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.726
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.726
29813.m001543 Ricinus communis 29813.m001543 I 0.726
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.725
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.724
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.724
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.724
Si024417m.g Setaria italica Si024417m.g I 0.724
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.724
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.724
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.724
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.724
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.724
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.724
Cla010474 Citrullus lanatus Cla010474 I 0.724
30174.m009031 Ricinus communis 30174.m009031 I 0.724
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.724
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.724
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.723
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.723
Si038848m.g Setaria italica Si038848m.g I 0.723
Si027288m.g Setaria italica Si027288m.g I 0.723
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.723
Ca_10494 Cicer arietinum Ca_10494 I 0.723
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.723
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.723
Pm015931 Prunus mume Pm015931 I 0.723
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.723
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.723
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.723
TCM_018659 Theobroma cacao TCM_018659 I 0.723
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.723
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.723
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.723
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.723
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.723
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.723
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.723
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.723
MDP0000276536 Malus domestica MDP0000276536 I 0.723
MDP0000551969 Malus domestica MDP0000551969 I 0.723
OS12G0582900 Oryza sativa OS12G0582900 I 0.723
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.723
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.723
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.723
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.723
PK13330.1 Cannabis sativa PK13330.1 I 0.723
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.723
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.723
29635.m000461 Ricinus communis 29635.m000461 I 0.723
F775_02727 Aegilops tauschii F775_02727 I 0.723
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.723
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.723
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.723
OBART12G17080 Oryza barthii OBART12G17080 I 0.723
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.723
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.723
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.722
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.722
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.721
Cla005054 Citrullus lanatus Cla005054 N 0.720
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.720
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.720
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.720
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.720
MDP0000127123 Malus domestica MDP0000127123 N 0.720
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.716
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.716
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.716
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.716
Ca_00417 Cicer arietinum Ca_00417 I 0.715
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.715
Pm030235 Prunus mume Pm030235 I 0.714
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.714
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.714
MDP0000197375 Malus domestica MDP0000197375 I 0.714
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.714
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.714
MDP0000157628 Malus domestica MDP0000157628 I 0.714
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.713
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.713
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.713
TCM_014471 Theobroma cacao TCM_014471 I 0.713
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.713
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.712
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.712
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.711
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.709
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.709
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.709
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.709
mgf022665m Mimulus guttatus mgf022665m I 0.706
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.705
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.705
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.705
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.704
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.704
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.704
Ca_08232 Cicer arietinum Ca_08232 I 0.704
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.704
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.704
MDP0000316843 Malus domestica MDP0000316843 N 0.704
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.704
MDP0000177547 Malus domestica MDP0000177547 I 0.704
Pm025326 Prunus mume Pm025326 I 0.704
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.704
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.704
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.704
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.704
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.704
TCM_025913 Theobroma cacao TCM_025913 I 0.704
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.704
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.703
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.703
Bo2g018360 Brassica oleracea Bo2g018360 I 0.703
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.703
Bo9g152440 Brassica oleracea Bo9g152440 I 0.703
30084.m000185 Ricinus communis 30084.m000185 I 0.703
Bra002262 Brassica rapa Bra002262 I 0.703
OS07G0204000 Oryza sativa OS07G0204000 I 0.703
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.703
OBART07G06690 Oryza barthii OBART07G06690 I 0.703
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.703
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.703
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.703
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.703
OB07G15030 Oryza brachyantha OB07G15030 I 0.703
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.703
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.703
Bra006518 Brassica rapa Bra006518 I 0.703
Bo3g013830 Brassica oleracea Bo3g013830 I 0.703
Bra020063 Brassica rapa Bra020063 I 0.703
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.703
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.703
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.703
TCM_040015 Theobroma cacao TCM_040015 I 0.703
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.703
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.702
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.702
Si033237m.g Setaria italica Si033237m.g I 0.702
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.702
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.702
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.702
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.701
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.701
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.700
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.700
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.699
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.699
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.698
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.697
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.697
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.697
Pm000004 Prunus mume Pm000004 I 0.693
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.693
MDP0000525933 Malus domestica MDP0000525933 I 0.693
PK28640.1 Cannabis sativa PK28640.1 I 0.692
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.691
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.690
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.690
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.690
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.690
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.690
Cla012318 Citrullus lanatus Cla012318 I 0.690
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.690
mgf024137m Mimulus guttatus mgf024137m N 0.689
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.689
F775_04303 Aegilops tauschii F775_04303 I 0.685
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.685
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.684
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.684
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.682
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.682
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.682
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.682
mgf023693m Mimulus guttatus mgf023693m I 0.680
mgf022810m Mimulus guttatus mgf022810m I 0.680
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.678