30174.m008961 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 30174.m008961 T006770_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.720 0.725
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.720 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30174.m008961 AP2 30 81

Links

Other AP2 family TFs
Other Ricinus communis TFs

250 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.818
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.818
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.818
Pm008788 Prunus mume Pm008788 I 0.818
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.818
mgf018851m Mimulus guttatus mgf018851m I 0.818
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.818
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.818
TCM_005425 Theobroma cacao TCM_005425 I 0.818
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.818
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.818
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.818
MDP0000133476 Malus domestica MDP0000133476 I 0.818
MDP0000138669 Malus domestica MDP0000138669 I 0.818
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.815
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.811
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.808
Si032213m.g Setaria italica Si032213m.g I 0.808
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.805
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.805
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.802
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.802
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.800
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.798
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.798
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.798
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.796
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.796
Cla021590 Citrullus lanatus Cla021590 I 0.792
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.792
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.791
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.786
Ca_16397 Cicer arietinum Ca_16397 I 0.786
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.786
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.786
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.786
PK25269.1 Cannabis sativa PK25269.1 I 0.774
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.771
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.771
OB09G23520 Oryza brachyantha OB09G23520 I 0.764
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.758
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.752
Si027288m.g Setaria italica Si027288m.g I 0.751
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.750
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.746
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.746
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.745
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.745
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.745
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.745
TCM_015579 Theobroma cacao TCM_015579 I 0.745
TCM_011632 Theobroma cacao TCM_011632 I 0.745
30068.m002623 Ricinus communis 30068.m002623 I 0.743
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.742
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.742
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.742
29813.m001543 Ricinus communis 29813.m001543 I 0.742
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.741
Si024417m.g Setaria italica Si024417m.g I 0.741
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.741
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.741
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.741
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.741
Cla010474 Citrullus lanatus Cla010474 I 0.741
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.741
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.741
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.741
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.741
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.741
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.741
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.740
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.740
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.740
TCM_018659 Theobroma cacao TCM_018659 I 0.740
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.740
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.740
PK13330.1 Cannabis sativa PK13330.1 I 0.740
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.740
F775_02727 Aegilops tauschii F775_02727 I 0.740
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.740
Si038848m.g Setaria italica Si038848m.g I 0.740
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.740
Ca_10494 Cicer arietinum Ca_10494 I 0.740
MDP0000551969 Malus domestica MDP0000551969 I 0.740
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.740
MDP0000276536 Malus domestica MDP0000276536 I 0.740
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.740
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.740
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.740
Ca_25424 Cicer arietinum Ca_25424 I 0.740
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.740
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.740
Pm015931 Prunus mume Pm015931 I 0.740
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.740
29635.m000461 Ricinus communis 29635.m000461 I 0.740
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.740
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.740
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.740
OS12G0582900 Oryza sativa OS12G0582900 I 0.740
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.740
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.740
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.740
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.740
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.740
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.740
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.740
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.740
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.740
OBART12G17080 Oryza barthii OBART12G17080 I 0.740
30174.m009031 Ricinus communis 30174.m009031 I 0.739
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.737
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.736
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.736
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.736
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.734
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.734
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.733
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.733
Ca_00417 Cicer arietinum Ca_00417 I 0.732
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.731
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.731
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.731
MDP0000197375 Malus domestica MDP0000197375 I 0.730
Pm030235 Prunus mume Pm030235 I 0.730
MDP0000157628 Malus domestica MDP0000157628 I 0.730
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.730
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.730
POPTR_0002s15480 Populus trichocarpa POPTR_0002s15480 N 0.729
TCM_014471 Theobroma cacao TCM_014471 I 0.728
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.726
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.724
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.724
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.723
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.723
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.721
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.720
OS07G0204000 Oryza sativa OS07G0204000 I 0.720
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.720
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.720
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.720
Bo2g018360 Brassica oleracea Bo2g018360 I 0.720
Bo3g013830 Brassica oleracea Bo3g013830 I 0.720
Bo9g152440 Brassica oleracea Bo9g152440 I 0.720
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.720
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.720
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.720
MDP0000177547 Malus domestica MDP0000177547 I 0.720
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.720
Bra002262 Brassica rapa Bra002262 I 0.720
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.720
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.720
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.720
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.720
Bra006518 Brassica rapa Bra006518 I 0.720
Bra020063 Brassica rapa Bra020063 I 0.720
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.720
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.720
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.720
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.720
Pm025326 Prunus mume Pm025326 I 0.720
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.720
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.720
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.720
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.720
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.720
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.720
OB07G15030 Oryza brachyantha OB07G15030 I 0.720
Ca_08232 Cicer arietinum Ca_08232 I 0.720
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.720
TCM_040015 Theobroma cacao TCM_040015 I 0.720
OBART07G06690 Oryza barthii OBART07G06690 I 0.720
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.720
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.720
30084.m000185 Ricinus communis 30084.m000185 I 0.720
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.720
TCM_025913 Theobroma cacao TCM_025913 I 0.720
Si033237m.g Setaria italica Si033237m.g I 0.719
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.719
MDP0000127123 Malus domestica MDP0000127123 N 0.719
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.719
chr1.CM0284.80.nd Lotus japonicus chr1.CM0284.80.nd N 0.718
mgf022665m Mimulus guttatus mgf022665m I 0.718
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.718
Cla005054 Citrullus lanatus Cla005054 N 0.718
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.718
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.717
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.716
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.716
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.715
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.715
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.715
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.714
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.712
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.712
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.712
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.711
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.709
Pm000004 Prunus mume Pm000004 I 0.709
MDP0000525933 Malus domestica MDP0000525933 I 0.709
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.708
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.708
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.708
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.707
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.707
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.707
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.707
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.707
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.707
Cla012318 Citrullus lanatus Cla012318 I 0.707
PK28640.1 Cannabis sativa PK28640.1 I 0.707
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.707
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.707
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.706
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.704
MDP0000316843 Malus domestica MDP0000316843 N 0.703
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.701
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.701
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.701
F775_04303 Aegilops tauschii F775_04303 I 0.701
mgf023693m Mimulus guttatus mgf023693m I 0.699
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.699
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.699
mgf022810m Mimulus guttatus mgf022810m I 0.699
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.697
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.697
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.697
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.697
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.696
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.694
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.690
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.690
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.690
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.690
mgf024137m Mimulus guttatus mgf024137m N 0.688
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.686
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.683
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.683
Pavir.J19478 Panicum virgatum Pavir.J19478 I 0.683
GRMZM2G011236 Zea mays GRMZM2G011236 I 0.683
Si030686m.g Setaria italica Si030686m.g I 0.683
Pavir.Ba00533 Panicum virgatum Pavir.Ba00533 I 0.683
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.683
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.683
GRMZM2G384386 Zea mays GRMZM2G384386 I 0.682
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.681
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.681
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.679
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.679
BRADI1G23756 Brachypodium distachyon BRADI1G23756 I 0.678
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.677