PK28640.1 (Cannabis sativa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 PK28640.1 T010113_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.687 0.686
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.687 0.686
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK28640.1 AP2 21 72

Links

Other AP2 family TFs
Other Cannabis sativa TFs

222 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.773
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.770
Ca_00417 Cicer arietinum Ca_00417 I 0.765
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.761
30174.m009031 Ricinus communis 30174.m009031 I 0.755
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.755
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.751
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.750
MTR_4g112490 Medicago truncatula MTR_4g112490 N 0.750
MTR_4g111915 Medicago truncatula MTR_4g111915 N 0.750
Pm030235 Prunus mume Pm030235 I 0.747
PRUPE_ppa018710mg Prunus persica PRUPE_ppa018710mg I 0.747
MDP0000197375 Malus domestica MDP0000197375 I 0.747
MDP0000157628 Malus domestica MDP0000157628 I 0.747
TCM_014471 Theobroma cacao TCM_014471 I 0.742
Ca_06590 Cicer arietinum Ca_06590 N 0.740
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.729
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.729
Cla019296 Citrullus lanatus Cla019296 N 0.726
Cucsa.198700 Cucumis sativus Cucsa.198700 N 0.726
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.724
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.724
AMTR_s00006p00266920 Amborella trichopoda AMTR_s00006p00266920 I 0.724
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.723
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.721
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.721
MDP0000127123 Malus domestica MDP0000127123 N 0.720
VIT_17s0000g04480 Vitis vinifera VIT_17s0000g04480 I 0.720
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.719
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.719
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.719
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.718
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.718
PK25269.1 Cannabis sativa PK25269.1 I 0.717
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.716
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.715
MDP0000316843 Malus domestica MDP0000316843 N 0.715
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.715
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.715
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.714
cassava47343.m1 Manihot esculenta cassava47343.m1 N 0.714
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.714
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.714
mgf024137m Mimulus guttatus mgf024137m N 0.712
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.712
TCM_011632 Theobroma cacao TCM_011632 I 0.712
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.710
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.710
Si038848m.g Setaria italica Si038848m.g I 0.710
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.710
Si024417m.g Setaria italica Si024417m.g I 0.710
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.710
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.710
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.710
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.710
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.710
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.710
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.710
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.710
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.710
29635.m000461 Ricinus communis 29635.m000461 I 0.710
Pm015931 Prunus mume Pm015931 I 0.710
PK13330.1 Cannabis sativa PK13330.1 I 0.710
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.710
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.710
Cla010474 Citrullus lanatus Cla010474 I 0.710
Ca_10494 Cicer arietinum Ca_10494 I 0.710
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.710
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.710
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.710
F775_02727 Aegilops tauschii F775_02727 I 0.710
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.710
TCM_018659 Theobroma cacao TCM_018659 I 0.710
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.710
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.710
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.710
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.710
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.710
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.710
MDP0000276536 Malus domestica MDP0000276536 I 0.710
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.710
MDP0000551969 Malus domestica MDP0000551969 I 0.710
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.710
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.710
OBART12G17080 Oryza barthii OBART12G17080 I 0.710
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.710
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.710
OS12G0582900 Oryza sativa OS12G0582900 I 0.710
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.710
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.710
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.710
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.710
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.710
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.710
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.710
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.709
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.709
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.709
29813.m001543 Ricinus communis 29813.m001543 I 0.709
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.709
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.709
Ciclev10022187m.g Citrus clementina Ciclev10022187m.g N 0.708
orange1.1g042608m.g Citrus sinensis orange1.1g042608m.g N 0.708
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.707
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.707
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.707
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.707
Pm008788 Prunus mume Pm008788 I 0.707
30174.m008961 Ricinus communis 30174.m008961 I 0.707
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.707
TCM_005425 Theobroma cacao TCM_005425 I 0.707
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.707
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.707
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.707
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.707
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.707
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.707
MDP0000138669 Malus domestica MDP0000138669 I 0.707
gene26182-v1.0-hybrid Fragaria vesca gene26182-v1.0-hybrid N 0.707
MDP0000133476 Malus domestica MDP0000133476 I 0.707
mgf018851m Mimulus guttatus mgf018851m I 0.707
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.706
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.706
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.706
Ca_25424 Cicer arietinum Ca_25424 I 0.706
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.706
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.705
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.705
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.705
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.705
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.703
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.703
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.702
PGSC0003DMG400024606 Solanum tuberosum PGSC0003DMG400024606 I 0.702
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.701
Aquca_026_00181 Aquilegia coerulea Aquca_026_00181 I 0.701
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.701
GLYMA05G07690 Glycine max GLYMA05G07690 I 0.701
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.701
Si032213m.g Setaria italica Si032213m.g I 0.701
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.701
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.701
GLYMA17G13320 Glycine max GLYMA17G13320 I 0.701
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.700
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.700
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.698
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.697
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.697
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.696
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.695
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.695
Solyc03g114440.1 Solanum lycopersicum Solyc03g114440.1 N 0.693
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.692
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.692
Ca_16397 Cicer arietinum Ca_16397 I 0.692
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.692
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.691
LPERR07G17030 Leersia perrieri LPERR07G17030 I 0.691
mgf022665m Mimulus guttatus mgf022665m I 0.690
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.690
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.689
LjSGA_026378.1 Lotus japonicus LjSGA_026378.1 N 0.688
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.688
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.688
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.688
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.688
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.687
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.687
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.687
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.687
MDP0000177547 Malus domestica MDP0000177547 I 0.687
TCM_040015 Theobroma cacao TCM_040015 I 0.687
OBART07G06690 Oryza barthii OBART07G06690 I 0.687
OB07G15030 Oryza brachyantha OB07G15030 I 0.687
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.687
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.687
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.687
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.687
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.687
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.687
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.687
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.687
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.687
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.687
Bo3g013830 Brassica oleracea Bo3g013830 I 0.687
Bo2g018360 Brassica oleracea Bo2g018360 I 0.687
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.687
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.687
Bo9g152440 Brassica oleracea Bo9g152440 I 0.687
Bra002262 Brassica rapa Bra002262 I 0.687
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.687
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.687
Bra020063 Brassica rapa Bra020063 I 0.687
Bra006518 Brassica rapa Bra006518 I 0.687
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.687
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.687
30084.m000185 Ricinus communis 30084.m000185 I 0.687
Pm025326 Prunus mume Pm025326 I 0.687
OS07G0204000 Oryza sativa OS07G0204000 I 0.687
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.687
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.687
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.687
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.687
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.687
Ca_08232 Cicer arietinum Ca_08232 I 0.687
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.687
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.687
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.687
Si033237m.g Setaria italica Si033237m.g I 0.687
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.687
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.687
TCM_025913 Theobroma cacao TCM_025913 I 0.687
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.686
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.686
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.685
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.681
Cla021590 Citrullus lanatus Cla021590 I 0.681
Eucgr.B00666 Eucalyptus grandis Eucgr.B00666 I 0.680
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.680
Gorai.001G064900 Gossypium raimondii Gorai.001G064900 N 0.678
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.677
F775_04303 Aegilops tauschii F775_04303 I 0.677