MDP0000128326 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000128326 T008959_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.764 0.863
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.764 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000128326 AP2 42 93

Links

Other AP2 family TFs
Other Malus domestica TFs

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.766
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.766
Ca_08232 Cicer arietinum Ca_08232 I 0.766
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.766
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.766
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.766
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.766
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.766
Pm025326 Prunus mume Pm025326 I 0.766
TCM_025913 Theobroma cacao TCM_025913 I 0.766
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.766
MDP0000177547 Malus domestica MDP0000177547 I 0.766
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.766
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.766
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.766
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.764
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.764
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.764
OB07G15030 Oryza brachyantha OB07G15030 I 0.764
OBART07G06690 Oryza barthii OBART07G06690 I 0.764
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.764
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.764
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.764
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.764
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.764
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.764
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.764
30084.m000185 Ricinus communis 30084.m000185 I 0.764
OS07G0204000 Oryza sativa OS07G0204000 I 0.764
TCM_040015 Theobroma cacao TCM_040015 I 0.764
Bo9g152440 Brassica oleracea Bo9g152440 I 0.764
Bra002262 Brassica rapa Bra002262 I 0.764
Bra020063 Brassica rapa Bra020063 I 0.764
Bo3g013830 Brassica oleracea Bo3g013830 I 0.764
Bo2g018360 Brassica oleracea Bo2g018360 I 0.764
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.764
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.764
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.764
Bra006518 Brassica rapa Bra006518 I 0.764
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.764
mgf022665m Mimulus guttatus mgf022665m I 0.763
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.763
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.762
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.761
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.761
Si033237m.g Setaria italica Si033237m.g I 0.761
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.760
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.759
cassava23953.valid.m1 Manihot esculenta cassava23953.valid.m1 I 0.759
Eucgr.A02109 Eucalyptus grandis Eucgr.A02109 I 0.758
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.756
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.756
SapurV1A.1886s0020 Salix purpurea SapurV1A.1886s0020 I 0.756
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.755
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.754
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.754
Cucsa.334870 Cucumis sativus Cucsa.334870 I 0.753
Cla012318 Citrullus lanatus Cla012318 I 0.753
orange1.1g043751m.g Citrus sinensis orange1.1g043751m.g I 0.751
Ciclev10021611m.g Citrus clementina Ciclev10021611m.g I 0.751
Lus10010652.g Linum usitatissimum Lus10010652.g I 0.751
orange1.1g023169m.g Citrus sinensis orange1.1g023169m.g I 0.751
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.750
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.749
Si024417m.g Setaria italica Si024417m.g I 0.749
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.749
Cla010474 Citrullus lanatus Cla010474 I 0.749
Gorai.013G115000 Gossypium raimondii Gorai.013G115000 I 0.749
gene24824-v1.0-hybrid Fragaria vesca gene24824-v1.0-hybrid I 0.749
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.749
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.749
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.749
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.749
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.749
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.749
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.749
VIT_06s0004g00490 Vitis vinifera VIT_06s0004g00490 I 0.747
mgf023693m Mimulus guttatus mgf023693m I 0.747
mgf022810m Mimulus guttatus mgf022810m I 0.747
OBART12G17080 Oryza barthii OBART12G17080 I 0.746
Gorai.006G013600 Gossypium raimondii Gorai.006G013600 I 0.746
Pm015931 Prunus mume Pm015931 I 0.746
Ciclev10013796m.g Citrus clementina Ciclev10013796m.g I 0.746
evm.TU.supercontig_14.126 Carica papaya evm.TU.supercontig_14.126 I 0.746
29635.m000461 Ricinus communis 29635.m000461 I 0.746
OGLUM12G18720 Oryza glumaepatula OGLUM12G18720 I 0.746
MLOC_7255 Hordeum vulgare MLOC_7255 I 0.746
MTR_6g012970 Medicago truncatula MTR_6g012970 I 0.746
MDP0000276536 Malus domestica MDP0000276536 I 0.746
BGIOSGA037681 Oryza indica BGIOSGA037681 I 0.746
gene04400-v1.0-hybrid Fragaria vesca gene04400-v1.0-hybrid I 0.746
Traes_5DS_1BDB9837E Triticum aestivum Traes_5DS_1BDB9837E I 0.746
OS12G0582900 Oryza sativa OS12G0582900 I 0.746
ORUFI12G19000 Oryza rufipogon ORUFI12G19000 I 0.746
PGSC0003DMG400001343 Solanum tuberosum PGSC0003DMG400001343 I 0.746
GLYMA19G03165 Glycine max GLYMA19G03165 I 0.746
MDP0000551969 Malus domestica MDP0000551969 I 0.746
GLYMA19G03120 Glycine max GLYMA19G03120 I 0.746
SapurV1A.0322s0110 Salix purpurea SapurV1A.0322s0110 I 0.746
ORGLA12G0200400 Oryza glaberrima ORGLA12G0200400 I 0.746
GSMUA_Achr4G28070_001 Musa acuminata GSMUA_Achr4G28070_001 I 0.746
OMERI11G15200 Oryza meridionalis OMERI11G15200 I 0.746
PK13330.1 Cannabis sativa PK13330.1 I 0.746
ONIVA12G15550 Oryza nivara ONIVA12G15550 I 0.746
GRMZM2G039112 Zea mays GRMZM2G039112 I 0.746
OPUNC12G15550 Oryza punctata OPUNC12G15550 I 0.746
PRUPE_ppa025010mg Prunus persica PRUPE_ppa025010mg I 0.746
POPTR_0017s12370 Populus trichocarpa POPTR_0017s12370 I 0.746
orange1.1g046337m.g Citrus sinensis orange1.1g046337m.g I 0.746
Ca_10494 Cicer arietinum Ca_10494 I 0.746
TCM_018659 Theobroma cacao TCM_018659 I 0.746
F775_02727 Aegilops tauschii F775_02727 I 0.746
VIT_14s0108g01220 Vitis vinifera VIT_14s0108g01220 I 0.746
Si038848m.g Setaria italica Si038848m.g I 0.746
Sb08g019530 Sorghum bicolor Sb08g019530 I 0.746
GLYMA13G05690 Glycine max GLYMA13G05690 I 0.746
orange1.1g046190m.g Citrus sinensis orange1.1g046190m.g I 0.745
Ciclev10033847m.g Citrus clementina Ciclev10033847m.g I 0.745
29813.m001543 Ricinus communis 29813.m001543 I 0.745
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.744
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.744
Lus10001298.g Linum usitatissimum Lus10001298.g I 0.742
Lus10012703.g Linum usitatissimum Lus10012703.g I 0.742
cassava4942.m1 Manihot esculenta cassava4942.m1 I 0.742
Lus10036793.g Linum usitatissimum Lus10036793.g I 0.741
Lus10037137.g Linum usitatissimum Lus10037137.g I 0.741
SapurV1A.0081s0430 Salix purpurea SapurV1A.0081s0430 I 0.740
Solyc01g005630.1 Solanum lycopersicum Solyc01g005630.1 I 0.739
cassava4189.m1 Manihot esculenta cassava4189.m1 I 0.737
POPTR_0008s09080 Populus trichocarpa POPTR_0008s09080 I 0.737
Eucgr.I02007 Eucalyptus grandis Eucgr.I02007 I 0.729
POPTR_0019s05170 Populus trichocarpa POPTR_0019s05170 I 0.725
Lus10030430.g Linum usitatissimum Lus10030430.g I 0.725
SapurV1A.0598s0020 Salix purpurea SapurV1A.0598s0020 I 0.720
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.717
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.716
MDP0000525933 Malus domestica MDP0000525933 I 0.713
Pm000004 Prunus mume Pm000004 I 0.713
PRUPE_ppa025828mg Prunus persica PRUPE_ppa025828mg I 0.713
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.712
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.711
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.711
TCM_011632 Theobroma cacao TCM_011632 I 0.709
Gorai.008G178900 Gossypium raimondii Gorai.008G178900 I 0.709
F775_04303 Aegilops tauschii F775_04303 I 0.708
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.708
Lus10013614.g Linum usitatissimum Lus10013614.g I 0.706
GRMZM2G019443 Zea mays GRMZM2G019443 I 0.692
POPTR_0010s17110 Populus trichocarpa POPTR_0010s17110 I 0.691
MTR_6g029180 Medicago truncatula MTR_6g029180 I 0.688
PK25269.1 Cannabis sativa PK25269.1 I 0.686
30174.m009031 Ricinus communis 30174.m009031 I 0.685
PGSC0003DMG400023701 Solanum tuberosum PGSC0003DMG400023701 I 0.683
Solyc10g080650.1 Solanum lycopersicum Solyc10g080650.1 I 0.683
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.681
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.681
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.681
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.680
Cucsa.152770 Cucumis sativus Cucsa.152770 I 0.680
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.679
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.679
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.679
Cla021590 Citrullus lanatus Cla021590 I 0.679
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.679
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.679