CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OS07G0575000
(
Oryza sativa
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OS07G0575000
T004212_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RAP2-11
M06665_2.00
Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN
Dap-seq
OMalley et al.(2016)
RAP211_col_a
0.716
0.882
RAP2-11
M06666_2.00
Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND
Dap-seq
OMalley et al.(2016)
RAP211_colamp_a
0.716
0.882
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OS07T0575000-00
AP2
49
100
SKFVGVRQRPSGRWVAEIKDTTQKIRMWLGTFETADAAARAYDEAARLLRGA
Links
Other
AP2
family TFs
Other
Oryza sativa
TFs
169 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI07G16350
Oryza meridionalis
OMERI07G16350
I
0.810
ONIVA07G17970
Oryza nivara
ONIVA07G17970
I
0.810
OGLUM07G19400
Oryza glumaepatula
OGLUM07G19400
I
0.810
OBART07G19610
Oryza barthii
OBART07G19610
I
0.810
MLOC_69002
Hordeum vulgare
MLOC_69002
I
0.810
ORGLA07G0253000
Oryza glaberrima
ORGLA07G0253000
I
0.810
OPUNC07G18550
Oryza punctata
OPUNC07G18550
I
0.810
Traes_2BS_B1A73C7A8
Triticum aestivum
Traes_2BS_B1A73C7A8
I
0.810
BGIOSGA024035
Oryza indica
BGIOSGA024035
I
0.810
ORUFI07G20430
Oryza rufipogon
ORUFI07G20430
I
0.810
BRADI1G23756
Brachypodium distachyon
BRADI1G23756
I
0.802
GRMZM2G011236
Zea mays
GRMZM2G011236
I
0.795
GRMZM2G384386
Zea mays
GRMZM2G384386
I
0.794
Pavir.Ba00533
Panicum virgatum
Pavir.Ba00533
I
0.792
Pavir.J19478
Panicum virgatum
Pavir.J19478
I
0.792
Si030686m.g
Setaria italica
Si030686m.g
I
0.792
GRMZM2G019443
Zea mays
GRMZM2G019443
I
0.774
LPERR07G17030
Leersia perrieri
LPERR07G17030
I
0.769
Lus10039171.g
Linum usitatissimum
Lus10039171.g
I
0.722
Si033237m.g
Setaria italica
Si033237m.g
I
0.720
Sb02g006023
Sorghum bicolor
Sb02g006023
I
0.720
Lus10013764.g
Linum usitatissimum
Lus10013764.g
I
0.720
Pavir.Ba03636
Panicum virgatum
Pavir.Ba03636
I
0.719
POPTR_0002s15480
Populus trichocarpa
POPTR_0002s15480
N
0.718
OLONG_022569
Oryza longistaminata
OLONG_022569
I
0.717
ONIVA01G29960
Oryza nivara
ONIVA01G29960
I
0.717
OGLUM07G06400
Oryza glumaepatula
OGLUM07G06400
I
0.717
OBART07G06690
Oryza barthii
OBART07G06690
I
0.717
OB07G15030
Oryza brachyantha
OB07G15030
I
0.717
BGIOSGA025360
Oryza indica
BGIOSGA025360
I
0.717
OS07G0204000
Oryza sativa
OS07G0204000
I
0.717
ORUFI07G06610
Oryza rufipogon
ORUFI07G06610
I
0.717
ORGLA07G0057000
Oryza glaberrima
ORGLA07G0057000
I
0.717
TCM_040015
Theobroma cacao
TCM_040015
I
0.717
LPERR07G05890
Leersia perrieri
LPERR07G05890
I
0.717
GSMUA_Achr4G28640_001
Musa acuminata
GSMUA_Achr4G28640_001
I
0.717
evm.TU.supercontig_51.136
Carica papaya
evm.TU.supercontig_51.136
I
0.716
RAP2.11
Arabidopsis lyrata
scaffold_602074.1
I
0.716
Bo2g018360
Brassica oleracea
Bo2g018360
I
0.716
GLYMA19G29000
Glycine max
GLYMA19G29000
I
0.716
RAP2.11
Vitis vinifera
VIT_08s0007g07250
I
0.716
Gorai.013G244500
Gossypium raimondii
Gorai.013G244500
I
0.716
POPTR_0003s21090
Populus trichocarpa
POPTR_0003s21090
I
0.716
POPTR_0001s04190
Populus trichocarpa
POPTR_0001s04190
I
0.716
Pm025326
Prunus mume
Pm025326
I
0.716
Ca_08232
Cicer arietinum
Ca_08232
I
0.716
Bostr.26527s0221
Boechera stricta
Bostr.26527s0221
I
0.716
Carubv10002733m.g
Capsella rubella
Carubv10002733m.g
I
0.716
Cagra.1268s0022
Capsella grandiflora
Cagra.1268s0022
I
0.716
MDP0000177547
Malus domestica
MDP0000177547
I
0.716
Bo3g013830
Brassica oleracea
Bo3g013830
I
0.716
Bra006518
Brassica rapa
Bra006518
I
0.716
Thhalv10015715m.g
Eutrema salsugineum
Thhalv10015715m.g
I
0.716
Bra020063
Brassica rapa
Bra020063
I
0.716
MTR_7g085810
Medicago truncatula
MTR_7g085810
I
0.716
chr1.CM0371.120.nc
Lotus japonicus
chr1.CM0371.120.nc
I
0.716
TCM_025913
Theobroma cacao
TCM_025913
I
0.716
Bra002262
Brassica rapa
Bra002262
I
0.716
RAP2-11
Arabidopsis thaliana
AT5G19790
D
0.716
30084.m000185
Ricinus communis
30084.m000185
I
0.716
PRUPE_ppa016109mg
Prunus persica
PRUPE_ppa016109mg
I
0.716
GLYMA16G04410
Glycine max
GLYMA16G04410
I
0.716
SapurV1A.0918s0170
Salix purpurea
SapurV1A.0918s0170
I
0.716
Bo9g152440
Brassica oleracea
Bo9g152440
I
0.716
AMTR_s00068p00102110
Amborella trichopoda
AMTR_s00068p00102110
I
0.713
gene16598-v1.0-hybrid
Fragaria vesca
gene16598-v1.0-hybrid
I
0.713
Pavir.Bb00676
Panicum virgatum
Pavir.Bb00676
I
0.713
mgf022665m
Mimulus guttatus
mgf022665m
I
0.713
chr1.CM0284.80.nd
Lotus japonicus
chr1.CM0284.80.nd
N
0.712
Aquca_004_00669
Aquilegia coerulea
Aquca_004_00669
I
0.712
OPUNC07G06390
Oryza punctata
OPUNC07G06390
I
0.712
cassava23953.valid.m1
Manihot esculenta
cassava23953.valid.m1
I
0.709
Eucgr.A02109
Eucalyptus grandis
Eucgr.A02109
I
0.708
cassava9290.m1
Manihot esculenta
cassava9290.m1
I
0.707
SapurV1A.1886s0020
Salix purpurea
SapurV1A.1886s0020
I
0.706
Eucgr.B03605
Eucalyptus grandis
Eucgr.B03605
I
0.706
MDP0000525933
Malus domestica
MDP0000525933
I
0.705
Pm000004
Prunus mume
Pm000004
I
0.705
PRUPE_ppa025828mg
Prunus persica
PRUPE_ppa025828mg
I
0.705
Lus10010652.g
Linum usitatissimum
Lus10010652.g
I
0.704
Lus10013614.g
Linum usitatissimum
Lus10013614.g
I
0.704
orange1.1g023169m.g
Citrus sinensis
orange1.1g023169m.g
I
0.704
orange1.1g043751m.g
Citrus sinensis
orange1.1g043751m.g
I
0.704
Ciclev10021611m.g
Citrus clementina
Ciclev10021611m.g
I
0.704
Cucsa.334870
Cucumis sativus
Cucsa.334870
I
0.702
gene24824-v1.0-hybrid
Fragaria vesca
gene24824-v1.0-hybrid
I
0.702
Cla012318
Citrullus lanatus
Cla012318
I
0.702
PGSC0003DMG400025151
Solanum tuberosum
PGSC0003DMG400025151
I
0.696
GLYMA18G49761
Glycine max
GLYMA18G49761
I
0.696
PK25269.1
Cannabis sativa
PK25269.1
I
0.692
Solyc02g067020.1
Solanum lycopersicum
Solyc02g067020.1
I
0.691
SapurV1A.0081s0430
Salix purpurea
SapurV1A.0081s0430
I
0.690
TCM_011632
Theobroma cacao
TCM_011632
I
0.689
Gorai.008G178900
Gossypium raimondii
Gorai.008G178900
I
0.689
SELMODRAFT_73140
Selaginella moellendorffii
SELMODRAFT_73140
I
0.687
SELMODRAFT_73145
Selaginella moellendorffii
SELMODRAFT_73145
I
0.687
Gorai.006G013600
Gossypium raimondii
Gorai.006G013600
I
0.687
OPUNC12G15550
Oryza punctata
OPUNC12G15550
I
0.687
GSMUA_Achr4G28070_001
Musa acuminata
GSMUA_Achr4G28070_001
I
0.687
ORGLA12G0200400
Oryza glaberrima
ORGLA12G0200400
I
0.687
Ciclev10013796m.g
Citrus clementina
Ciclev10013796m.g
I
0.687
MLOC_7255
Hordeum vulgare
MLOC_7255
I
0.687
evm.TU.supercontig_14.126
Carica papaya
evm.TU.supercontig_14.126
I
0.687
GLYMA19G03165
Glycine max
GLYMA19G03165
I
0.687
gene04400-v1.0-hybrid
Fragaria vesca
gene04400-v1.0-hybrid
I
0.687
ONIVA12G15550
Oryza nivara
ONIVA12G15550
I
0.687
SapurV1A.0322s0110
Salix purpurea
SapurV1A.0322s0110
I
0.687
OMERI11G15200
Oryza meridionalis
OMERI11G15200
I
0.687
OGLUM12G18720
Oryza glumaepatula
OGLUM12G18720
I
0.687
MLOC_18783
Hordeum vulgare
MLOC_18783
I
0.687
OBART12G17080
Oryza barthii
OBART12G17080
I
0.687
orange1.1g046337m.g
Citrus sinensis
orange1.1g046337m.g
I
0.687
Sb08g019530
Sorghum bicolor
Sb08g019530
I
0.687
PK13330.1
Cannabis sativa
PK13330.1
I
0.687
MDP0000276536
Malus domestica
MDP0000276536
I
0.687
F775_02727
Aegilops tauschii
F775_02727
I
0.687
MDP0000551969
Malus domestica
MDP0000551969
I
0.687
GLYMA19G03120
Glycine max
GLYMA19G03120
I
0.687
BGIOSGA037681
Oryza indica
BGIOSGA037681
I
0.687
VIT_14s0108g01220
Vitis vinifera
VIT_14s0108g01220
I
0.687
Ca_10494
Cicer arietinum
Ca_10494
I
0.687
MTR_6g012970
Medicago truncatula
MTR_6g012970
I
0.687
29635.m000461
Ricinus communis
29635.m000461
I
0.687
Traes_5DS_1BDB9837E
Triticum aestivum
Traes_5DS_1BDB9837E
I
0.687
POPTR_0017s12370
Populus trichocarpa
POPTR_0017s12370
I
0.687
Si038848m.g
Setaria italica
Si038848m.g
I
0.687
TCM_018659
Theobroma cacao
TCM_018659
I
0.687
PRUPE_ppa025010mg
Prunus persica
PRUPE_ppa025010mg
I
0.687
PGSC0003DMG400001343
Solanum tuberosum
PGSC0003DMG400001343
I
0.687
Pm015931
Prunus mume
Pm015931
I
0.687
GRMZM2G039112
Zea mays
GRMZM2G039112
I
0.687
OS12G0582900
Oryza sativa
OS12G0582900
I
0.687
ORUFI12G19000
Oryza rufipogon
ORUFI12G19000
I
0.687
30174.m009031
Ricinus communis
30174.m009031
I
0.686
29813.m001543
Ricinus communis
29813.m001543
I
0.685
Ciclev10033847m.g
Citrus clementina
Ciclev10033847m.g
I
0.685
orange1.1g046190m.g
Citrus sinensis
orange1.1g046190m.g
I
0.685
cassava4189.m1
Manihot esculenta
cassava4189.m1
I
0.685
Lus10012703.g
Linum usitatissimum
Lus10012703.g
I
0.684
GRMZM2G010100
Zea mays
GRMZM2G010100
I
0.684
Sb01g014810
Sorghum bicolor
Sb01g014810
I
0.684
Pavir.J28151
Panicum virgatum
Pavir.J28151
I
0.684
Pavir.Cb00448
Panicum virgatum
Pavir.Cb00448
I
0.684
Pavir.Ib03934
Panicum virgatum
Pavir.Ib03934
I
0.684
Pavir.Ia01300
Panicum virgatum
Pavir.Ia01300
I
0.684
Pavir.J28133
Panicum virgatum
Pavir.J28133
I
0.684
Cla010474
Citrullus lanatus
Cla010474
I
0.684
Lus10001298.g
Linum usitatissimum
Lus10001298.g
I
0.684
Si024417m.g
Setaria italica
Si024417m.g
I
0.684
Cucsa.158080
Cucumis sativus
Cucsa.158080
I
0.684
cassava1773.valid.m1
Manihot esculenta
cassava1773.valid.m1
I
0.684
GRMZM2G018138
Zea mays
GRMZM2G018138
I
0.683
cassava4942.m1
Manihot esculenta
cassava4942.m1
I
0.683
Sb02g030350
Sorghum bicolor
Sb02g030350
I
0.683
GLYMA13G05690
Glycine max
GLYMA13G05690
I
0.683
Lus10037137.g
Linum usitatissimum
Lus10037137.g
I
0.682
Lus10036793.g
Linum usitatissimum
Lus10036793.g
I
0.682
OPUNC09G15300
Oryza punctata
OPUNC09G15300
I
0.680
ORUFI09G18220
Oryza rufipogon
ORUFI09G18220
I
0.680
cassava9303.m1
Manihot esculenta
cassava9303.m1
I
0.680
OMERI09G12500
Oryza meridionalis
OMERI09G12500
I
0.680
Solyc01g091760.2
Solanum lycopersicum
Solyc01g091760.2
I
0.679
BGIOSGA031114
Oryza indica
BGIOSGA031114
I
0.679
PGSC0003DMG400017051
Solanum tuberosum
PGSC0003DMG400017051
I
0.679
Aquca_002_00706
Aquilegia coerulea
Aquca_002_00706
I
0.679
ONIVA09G17920
Oryza nivara
ONIVA09G17920
I
0.679
MTR_7g011630
Medicago truncatula
MTR_7g011630
I
0.679
POPTR_0008s09080
Populus trichocarpa
POPTR_0008s09080
I
0.678
AMTR_s00069p00132820
Amborella trichopoda
AMTR_s00069p00132820
I
0.677