Si006371m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si006371m.g T005243_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
P93632_MAIZE
M09712_2.00
Zea mays Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GL15_01
0.749 0.818
Q9XHD4_PETHY
M09737_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2A_01
0.713 0.717
Q9XHD3_PETHY
M09736_2.00
Petunia x hybrida Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AP2B_01
0.688 0.667
RAP2.7
M00845_2.00
Arabidopsis thaliana
KRCGRGGD

HCCYCGYM
PBM
Franco-Zorrilla et al.(2014)
TOE1
0.681 0.667
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si006371m AP2 105 155
Si006371m AP2 198 249

Links

Other AP2 family TFs
Other Setaria italica TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.754
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.749
P93632_MAIZE Zea mays P93632_MAIZE D 0.749
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.749
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.747
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.728
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.728
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.728
OB06G29960 Oryza brachyantha OB06G29960 I 0.728
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.728
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.728
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.726
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.724
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.714
Ca_09295 Cicer arietinum Ca_09295 I 0.713
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.713
Cla000716 Citrullus lanatus Cla000716 I 0.713
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.713
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.713
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.713
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.713
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.713
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.713
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.713
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.713
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.713
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.713
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.713
PK02403.1 Cannabis sativa PK02403.1 I 0.713
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.713
AP2 Arabidopsis thaliana AT4G36920 I 0.713
Bra017809 Brassica rapa Bra017809 I 0.713
Bra011741 Brassica rapa Bra011741 I 0.713
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.713
Bo7g118400 Brassica oleracea Bo7g118400 I 0.713
Bo1g004960 Brassica oleracea Bo1g004960 I 0.713
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.713
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.713
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.713
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.713
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.713
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.713
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.713
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.713
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.712
mgf009315m Mimulus guttatus mgf009315m I 0.712
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.711
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.711
29805.m001494 Ricinus communis 29805.m001494 I 0.711
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.710
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.709
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.709
TCM_000665 Theobroma cacao TCM_000665 I 0.709
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.709
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.709
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.708
MDP0000181606 Malus domestica MDP0000181606 I 0.708
Pm000974 Prunus mume Pm000974 I 0.708
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.707
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.706
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.706
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.706
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.706
Si012635m.g Setaria italica Si012635m.g I 0.706
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.706
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.706
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.706
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.706
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.706
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.705
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.705
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.705
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.705
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.705
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.705
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.704
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.704
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.704
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.704
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.704
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.704
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.704
Si025305m.g Setaria italica Si025305m.g I 0.704
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.704
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.704
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.704
Pm002492 Prunus mume Pm002492 I 0.704
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.704
28752.m000339 Ricinus communis 28752.m000339 I 0.704
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.704
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.704
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.704
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.704
Ca_02499 Cicer arietinum Ca_02499 I 0.704
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.704
TCM_022077 Theobroma cacao TCM_022077 I 0.704
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.704
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.704
OS05G0121600 Oryza sativa OS05G0121600 I 0.704
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.704
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.704
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.704
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.704
MDP0000200319 Malus domestica MDP0000200319 I 0.704
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.704
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.704
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.704
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.704
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.704
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.704
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.704
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.703
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.702
29169.m000017 Ricinus communis 29169.m000017 I 0.702
PK07183.1 Cannabis sativa PK07183.1 I 0.702
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.702
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.702
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.702
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.702
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.702
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.702
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.702
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.702
F775_32962 Aegilops tauschii F775_32962 I 0.702
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.702
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.702
TCM_042000 Theobroma cacao TCM_042000 I 0.702
mgf021945m Mimulus guttatus mgf021945m I 0.701
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.700
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.700
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.700
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.700
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.700
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.700
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.699
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.699
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.699
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.698
Cla018124 Citrullus lanatus Cla018124 I 0.698
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.698
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.697
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.697
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.697
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.696
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.696
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.696
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.696
MDP0000137561 Malus domestica MDP0000137561 I 0.696
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.696
Pm030172 Prunus mume Pm030172 I 0.696
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.695
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.695
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.695
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.695
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.694
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.694
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.693
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.693
Ca_14618 Cicer arietinum Ca_14618 I 0.692
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.692
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.691
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.689
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.688
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.688
Ca_12010 Cicer arietinum Ca_12010 I 0.688
MDP0000163645 Malus domestica MDP0000163645 I 0.687
OB03G45870 Oryza brachyantha OB03G45870 I 0.687
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.687
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.686
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.686
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.686
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.686
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.686
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.686
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.686
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.686
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.685
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.685
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.684
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.682
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.682
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.681
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.681
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.681
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.681
Bra011939 Brassica rapa Bra011939 I 0.680
Bo4g070350 Brassica oleracea Bo4g070350 I 0.680
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.679
OBART07G08110 Oryza barthii OBART07G08110 I 0.679
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.679
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.679
OS07G0235800 Oryza sativa OS07G0235800 I 0.679
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.679
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.679
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.679
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.679
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.679
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.679
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.679
mgf005133m Mimulus guttatus mgf005133m I 0.678
mgf010466m Mimulus guttatus mgf010466m I 0.678
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.678
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.677
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.677
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.677
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.677
Si029636m.g Setaria italica Si029636m.g I 0.677
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.677