OB03G45870 (Oryza brachyantha)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OB03G45870 T003006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.834 0.919
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.825 0.929
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.809 0.899
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.803 0.848
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OB03G45870.1 AP2 112 162
OB03G45870.1 AP2 204 255

Links

Other AP2 family TFs
Other Oryza brachyantha TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.857
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.857
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.857
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.857
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.857
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.857
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.850
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.849
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.849
OBART07G08110 Oryza barthii OBART07G08110 I 0.849
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.849
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.849
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.849
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.849
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.849
OS07G0235800 Oryza sativa OS07G0235800 I 0.849
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.849
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.847
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.847
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.847
Si036068m.g Setaria italica Si036068m.g I 0.847
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.847
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.847
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.845
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.845
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.845
Si029636m.g Setaria italica Si029636m.g I 0.845
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.844
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.843
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.841
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.840
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.839
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.838
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.838
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.837
TCM_000665 Theobroma cacao TCM_000665 I 0.836
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.836
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.836
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.835
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.835
29805.m001494 Ricinus communis 29805.m001494 I 0.835
AP2 Arabidopsis thaliana AT4G36920 I 0.834
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.834
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.834
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.834
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.834
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.834
Ca_14618 Cicer arietinum Ca_14618 I 0.834
Ca_09295 Cicer arietinum Ca_09295 I 0.834
Bo1g004960 Brassica oleracea Bo1g004960 I 0.834
Bo7g118400 Brassica oleracea Bo7g118400 I 0.834
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.834
Bra011741 Brassica rapa Bra011741 I 0.834
Bra017809 Brassica rapa Bra017809 I 0.834
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.834
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.834
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.834
PK02403.1 Cannabis sativa PK02403.1 I 0.833
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.833
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.833
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.833
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.833
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.833
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.833
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.833
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.833
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.833
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.833
Cla000716 Citrullus lanatus Cla000716 I 0.833
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.833
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.833
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.833
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.833
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.832
mgf009315m Mimulus guttatus mgf009315m I 0.832
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.832
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.831
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.831
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.831
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.831
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.831
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.831
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.831
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.831
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.831
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.831
Si012635m.g Setaria italica Si012635m.g I 0.831
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.830
Ca_02499 Cicer arietinum Ca_02499 I 0.830
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.830
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.830
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.830
28752.m000339 Ricinus communis 28752.m000339 I 0.829
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.829
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.829
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.828
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.828
Si025305m.g Setaria italica Si025305m.g I 0.828
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.828
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.828
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.828
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.828
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.828
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.828
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.828
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.828
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.828
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.828
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.828
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.828
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.828
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.828
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.828
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.828
MDP0000200319 Malus domestica MDP0000200319 I 0.828
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.828
OS05G0121600 Oryza sativa OS05G0121600 I 0.828
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.827
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.827
TCM_022077 Theobroma cacao TCM_022077 I 0.827
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.827
Cla018124 Citrullus lanatus Cla018124 I 0.827
PK07183.1 Cannabis sativa PK07183.1 I 0.827
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.827
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.827
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.827
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.827
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.827
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.826
Pm002492 Prunus mume Pm002492 I 0.826
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.826
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.826
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.826
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.826
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.826
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.826
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.826
TCM_042000 Theobroma cacao TCM_042000 I 0.826
F775_32962 Aegilops tauschii F775_32962 I 0.826
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.826
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.825
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.825
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.825
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.825
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.825
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.825
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.825
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.825
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.825
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.824
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.824
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.824
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.824
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.824
OB06G29960 Oryza brachyantha OB06G29960 I 0.824
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.824
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.824
mgf021945m Mimulus guttatus mgf021945m I 0.823
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.823
MDP0000181606 Malus domestica MDP0000181606 I 0.823
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.823
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.823
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.823
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.823
Pm000974 Prunus mume Pm000974 I 0.823
Bo4g070350 Brassica oleracea Bo4g070350 I 0.822
29169.m000017 Ricinus communis 29169.m000017 I 0.822
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.822
Bra011939 Brassica rapa Bra011939 I 0.822
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.822
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.819
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.819
MDP0000137561 Malus domestica MDP0000137561 I 0.817
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.816
Pm030172 Prunus mume Pm030172 I 0.816
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.816
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.816
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.815
mgf010466m Mimulus guttatus mgf010466m I 0.814
mgf005133m Mimulus guttatus mgf005133m I 0.814
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.813
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.811
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.811
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.811
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.809
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.808
Ca_12010 Cicer arietinum Ca_12010 I 0.808
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.808
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.806
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.804
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.804
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.803
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.803
P93632_MAIZE Zea mays P93632_MAIZE D 0.803
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.803
MDP0000163645 Malus domestica MDP0000163645 I 0.802
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.802
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.802
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.802
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.802
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.802
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.801
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.800
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.800
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.800
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.798
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.798
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.797
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.797
OS03G0818800 Oryza sativa OS03G0818800 I 0.796
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.795
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.795
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.794
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.794
Bra012139 Brassica rapa Bra012139 I 0.792
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.792
Bo7g064000 Brassica oleracea Bo7g064000 I 0.792
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.787
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.787
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.786
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.786
TOE3 Arabidopsis thaliana AT5G67180 I 0.782
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.782
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.782
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.782
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.782
Cla020549 Citrullus lanatus Cla020549 I 0.780
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.780
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.775
Cla018549 Citrullus lanatus Cla018549 I 0.770
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.770
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.768
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.767
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.764
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.764
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.714
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.697
Si006371m.g Setaria italica Si006371m.g I 0.687
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.682
PK14490.1 Cannabis sativa PK14490.1 I 0.681
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.681