Bo7g064000 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo7g064000 T000893_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.811 0.918
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.799 0.878
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.782 0.857
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.767 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g064000.1 AP2 103 152
Bo7g064000.1 AP2 195 246

Links

Other AP2 family TFs
Other Brassica oleracea TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra012139 Brassica rapa Bra012139 I 0.849
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.841
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.821
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.821
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.821
TOE3 Arabidopsis thaliana AT5G67180 I 0.821
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.821
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.819
Ca_14618 Cicer arietinum Ca_14618 I 0.812
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.811
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.811
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.811
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.811
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.811
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.811
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.811
Cla000716 Citrullus lanatus Cla000716 I 0.811
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.811
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.811
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.811
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.811
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.811
Ca_09295 Cicer arietinum Ca_09295 I 0.811
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.811
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.811
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.811
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.811
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.811
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.811
Bra011741 Brassica rapa Bra011741 I 0.811
Bo7g118400 Brassica oleracea Bo7g118400 I 0.811
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.811
AP2 Arabidopsis thaliana AT4G36920 I 0.811
Bra017809 Brassica rapa Bra017809 I 0.811
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.811
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.811
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.811
Bo1g004960 Brassica oleracea Bo1g004960 I 0.811
PK02403.1 Cannabis sativa PK02403.1 I 0.811
mgf009315m Mimulus guttatus mgf009315m I 0.810
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.810
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.809
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.809
29805.m001494 Ricinus communis 29805.m001494 I 0.809
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.809
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.808
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.807
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.807
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.807
TCM_000665 Theobroma cacao TCM_000665 I 0.807
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.806
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.805
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.804
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.804
Si012635m.g Setaria italica Si012635m.g I 0.804
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.804
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.804
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.804
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.804
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.804
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.804
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.804
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.804
PK07183.1 Cannabis sativa PK07183.1 I 0.803
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.803
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.803
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.803
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.802
OS05G0121600 Oryza sativa OS05G0121600 I 0.802
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.802
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.802
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.802
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.802
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.802
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.802
Pm002492 Prunus mume Pm002492 I 0.802
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.802
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.802
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.802
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.802
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.802
MDP0000200319 Malus domestica MDP0000200319 I 0.802
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.802
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.802
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.802
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.802
TCM_022077 Theobroma cacao TCM_022077 I 0.802
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.802
Ca_02499 Cicer arietinum Ca_02499 I 0.802
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.802
28752.m000339 Ricinus communis 28752.m000339 I 0.802
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.802
Si025305m.g Setaria italica Si025305m.g I 0.802
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.802
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.802
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.802
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.802
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.802
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.802
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.802
Bo4g070350 Brassica oleracea Bo4g070350 I 0.802
Bra011939 Brassica rapa Bra011939 I 0.802
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.802
PGSC0003DMG400025479 Solanum tuberosum PGSC0003DMG400025479 I 0.801
29169.m000017 Ricinus communis 29169.m000017 I 0.800
TCM_042000 Theobroma cacao TCM_042000 I 0.800
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.800
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.800
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.800
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.800
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.800
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.800
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.800
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.800
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.800
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.800
F775_32962 Aegilops tauschii F775_32962 I 0.800
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.800
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.800
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.800
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.800
mgf005133m Mimulus guttatus mgf005133m I 0.800
mgf010466m Mimulus guttatus mgf010466m I 0.800
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.800
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.800
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.800
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.800
mgf021945m Mimulus guttatus mgf021945m I 0.799
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.799
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.799
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.799
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.798
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.798
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.798
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.798
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.798
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.798
Pm000974 Prunus mume Pm000974 I 0.797
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.797
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.797
MDP0000181606 Malus domestica MDP0000181606 I 0.797
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.797
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.796
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.796
Cla018124 Citrullus lanatus Cla018124 I 0.796
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.796
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.795
OB06G29960 Oryza brachyantha OB06G29960 I 0.795
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.795
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.795
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.795
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.795
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.795
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.794
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.794
MDP0000137561 Malus domestica MDP0000137561 I 0.794
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.794
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.794
Pm030172 Prunus mume Pm030172 I 0.794
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.793
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.793
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.793
OBART07G08110 Oryza barthii OBART07G08110 I 0.793
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.793
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.793
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.793
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.793
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.793
OS07G0235800 Oryza sativa OS07G0235800 I 0.793
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.793
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.793
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.793
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.792
Si029636m.g Setaria italica Si029636m.g I 0.792
OB03G45870 Oryza brachyantha OB03G45870 I 0.792
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.792
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.792
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.791
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.791
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.791
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.790
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.790
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.790
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.790
Si036068m.g Setaria italica Si036068m.g I 0.790
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.789
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.787
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.786
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.786
Ca_12010 Cicer arietinum Ca_12010 I 0.786
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.785
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.785
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.783
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.783
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.782
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.782
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.782
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.781
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.780
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.779
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.778
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.777
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.777
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.777
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.777
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.776
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.776
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.776
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.774
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.774
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.774
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.773
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.773
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.770
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.770
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.770
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.769
MDP0000163645 Malus domestica MDP0000163645 I 0.768
P93632_MAIZE Zea mays P93632_MAIZE D 0.767
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.767
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.767
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.765
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.764
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.763
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.761
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.760
OS03G0818800 Oryza sativa OS03G0818800 I 0.758
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.754
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.754
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.753
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.753
Cla020549 Citrullus lanatus Cla020549 I 0.749
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.740
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.737
Cla018549 Citrullus lanatus Cla018549 I 0.735
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.680
evm.TU.supercontig_1.271 Carica papaya evm.TU.supercontig_1.271 N 0.678