PGSC0003DMG400025479 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400025479 T004464_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.855 0.980
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.837 0.949
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.826 0.918
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.816 0.867
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400065500 AP2 162 211
PGSC0003DMT400065500 AP2 254 305
PGSC0003DMT400065501 AP2 162 211
PGSC0003DMT400065501 AP2 254 305
PGSC0003DMT400065503 AP2 162 192

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

242 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc02g064960.2 Solanum lycopersicum Solyc02g064960.2 I 0.864
OGLUM04G27380 Oryza glumaepatula OGLUM04G27380 I 0.855
ONIVA04G25920 Oryza nivara ONIVA04G25920 I 0.855
GSMUA_Achr1G09830_001 Musa acuminata GSMUA_Achr1G09830_001 I 0.855
Q9XHD4_PETHY Petunia x hybrida Q9XHD4_PETHY D 0.855
Cucsa.102550 Cucumis sativus Cucsa.102550 I 0.855
GRMZM2G174784 Zea mays GRMZM2G174784 I 0.855
GLYMA05G18041 Glycine max GLYMA05G18041 I 0.855
Carubv10004818m.g Capsella rubella Carubv10004818m.g I 0.855
Cagra.4909s0048 Capsella grandiflora Cagra.4909s0048 I 0.855
GLYMA17G18640 Glycine max GLYMA17G18640 I 0.855
GSMUA_Achr1G26080_001 Musa acuminata GSMUA_Achr1G26080_001 I 0.855
GSMUA_Achr3G13180_001 Musa acuminata GSMUA_Achr3G13180_001 I 0.855
Solyc02g093150.2 Solanum lycopersicum Solyc02g093150.2 I 0.855
MTR_4g094868 Medicago truncatula MTR_4g094868 I 0.855
Si012635m.g Setaria italica Si012635m.g I 0.855
Sb06g030670 Sorghum bicolor Sb06g030670 I 0.855
Solyc03g044300.2 Solanum lycopersicum Solyc03g044300.2 I 0.855
MTR_5g016810 Medicago truncatula MTR_5g016810 I 0.855
Cla000716 Citrullus lanatus Cla000716 I 0.855
Ca_09295 Cicer arietinum Ca_09295 I 0.855
TOE3 Vitis vinifera VIT_07s0031g00220 I 0.855
POPTR_0007s10780 Populus trichocarpa POPTR_0007s10780 I 0.855
GLYMA01G39520 Glycine max GLYMA01G39520 I 0.855
Bostr.7867s1579 Boechera stricta Bostr.7867s1579 I 0.855
Bo1g004960 Brassica oleracea Bo1g004960 I 0.855
OMERI04G22900 Oryza meridionalis OMERI04G22900 I 0.855
ORUFI04G29120 Oryza rufipogon ORUFI04G29120 I 0.855
Bra011741 Brassica rapa Bra011741 I 0.855
ORGLA04G0237800 Oryza glaberrima ORGLA04G0237800 I 0.855
BGIOSGA017250 Oryza indica BGIOSGA017250 I 0.855
OPUNC04G24930 Oryza punctata OPUNC04G24930 I 0.855
AP2 Arabidopsis thaliana AT4G36920 I 0.855
PK02403.1 Cannabis sativa PK02403.1 I 0.855
SapurV1A.0689s0070 Salix purpurea SapurV1A.0689s0070 I 0.855
Bra017809 Brassica rapa Bra017809 I 0.855
Bo7g118400 Brassica oleracea Bo7g118400 I 0.855
PGSC0003DMG400004006 Solanum tuberosum PGSC0003DMG400004006 I 0.855
evm.TU.supercontig_55.116 Carica papaya evm.TU.supercontig_55.116 I 0.855
Gorai.003G025900 Gossypium raimondii Gorai.003G025900 I 0.855
AP2 Arabidopsis lyrata fgenesh2_kg.7__332__AT4G36920.1 I 0.855
mgf009315m Mimulus guttatus mgf009315m I 0.854
PGSC0003DMG400006482 Solanum tuberosum PGSC0003DMG400006482 I 0.854
BRADI5G24100 Brachypodium distachyon BRADI5G24100 I 0.854
GSMUA_AchrUn_randomG16200_001 Musa acuminata GSMUA_AchrUn_randomG16200_001 I 0.853
29805.m001494 Ricinus communis 29805.m001494 I 0.853
Gorai.007G215900 Gossypium raimondii Gorai.007G215900 I 0.852
Gorai.008G077800 Gossypium raimondii Gorai.008G077800 I 0.852
TCM_000665 Theobroma cacao TCM_000665 I 0.852
GSMUA_Achr8G18550_001 Musa acuminata GSMUA_Achr8G18550_001 I 0.850
POPTR_0006s13460 Populus trichocarpa POPTR_0006s13460 I 0.848
Cucsa.367290 Cucumis sativus Cucsa.367290 I 0.848
SapurV1A.0209s0320 Salix purpurea SapurV1A.0209s0320 I 0.848
POPTR_0005s18400 Populus trichocarpa POPTR_0005s18400 I 0.847
Lus10023165.g Linum usitatissimum Lus10023165.g I 0.847
OS05G0121600 Oryza sativa OS05G0121600 I 0.846
OPUNC05G01480 Oryza punctata OPUNC05G01480 I 0.846
POPTR_0016s08530 Populus trichocarpa POPTR_0016s08530 I 0.846
ORGLA05G0015400 Oryza glaberrima ORGLA05G0015400 I 0.846
PGSC0003DMG400025390 Solanum tuberosum PGSC0003DMG400025390 I 0.846
PGSC0003DMG400027904 Solanum tuberosum PGSC0003DMG400027904 I 0.846
28752.m000339 Ricinus communis 28752.m000339 I 0.846
orange1.1g010454m.g Citrus sinensis orange1.1g010454m.g I 0.846
MDP0000200319 Malus domestica MDP0000200319 I 0.846
Gorai.002G251500 Gossypium raimondii Gorai.002G251500 I 0.846
Pavir.J11433 Panicum virgatum Pavir.J11433 I 0.846
Pavir.J23348 Panicum virgatum Pavir.J23348 I 0.846
PDK_20s1506731g001 Phoenix dactylifera PDK_20s1506731g001 I 0.846
chr3.LjT05P05.30.nd Lotus japonicus chr3.LjT05P05.30.nd I 0.846
SapurV1A.0247s0170 Salix purpurea SapurV1A.0247s0170 I 0.846
Eucgr.J02113 Eucalyptus grandis Eucgr.J02113 I 0.846
Aquca_027_00133 Aquilegia coerulea Aquca_027_00133 I 0.846
RAP2.7 Vitis vinifera VIT_06s0004g03590 I 0.846
TCM_022077 Theobroma cacao TCM_022077 I 0.846
AMTR_s00035p00205430 Amborella trichopoda AMTR_s00035p00205430 I 0.846
VIT_08s0040g03180 Vitis vinifera VIT_08s0040g03180 I 0.846
Ca_02499 Cicer arietinum Ca_02499 I 0.846
cassava24954.valid.m1 Manihot esculenta cassava24954.valid.m1 I 0.846
cassava13566.valid.m1 Manihot esculenta cassava13566.valid.m1 I 0.846
Pm002492 Prunus mume Pm002492 I 0.846
PRUPE_ppa005230mg Prunus persica PRUPE_ppa005230mg I 0.846
Si025305m.g Setaria italica Si025305m.g I 0.846
GLYMA12G07800 Glycine max GLYMA12G07800 I 0.846
GLYMA13G40470 Glycine max GLYMA13G40470 I 0.846
GLYMA11G15650 Glycine max GLYMA11G15650 I 0.846
BGIOSGA018911 Oryza indica BGIOSGA018911 I 0.846
GLYMA03G33470 Glycine max GLYMA03G33470 I 0.846
GSMUA_Achr9G03060_001 Musa acuminata GSMUA_Achr9G03060_001 I 0.846
GSMUA_Achr10G03230_001 Musa acuminata GSMUA_Achr10G03230_001 I 0.846
Traes_1DS_2BB06F54C Triticum aestivum Traes_1DS_2BB06F54C I 0.844
Cla018124 Citrullus lanatus Cla018124 I 0.844
Traes_1BS_E68807072 Triticum aestivum Traes_1BS_E68807072 I 0.844
Traes_1AS_90F3120F8 Triticum aestivum Traes_1AS_90F3120F8 I 0.844
TCM_042000 Theobroma cacao TCM_042000 I 0.844
29169.m000017 Ricinus communis 29169.m000017 I 0.844
Cucsa.307230 Cucumis sativus Cucsa.307230 I 0.844
Lus10009374.g Linum usitatissimum Lus10009374.g I 0.844
Lus10019331.g Linum usitatissimum Lus10019331.g I 0.844
Gorai.004G002100 Gossypium raimondii Gorai.004G002100 I 0.844
BRADI2G37800 Brachypodium distachyon BRADI2G37800 I 0.844
F775_32962 Aegilops tauschii F775_32962 I 0.844
Solyc10g084340.1 Solanum lycopersicum Solyc10g084340.1 I 0.844
cassava12358.valid.m1 Manihot esculenta cassava12358.valid.m1 I 0.844
PK07183.1 Cannabis sativa PK07183.1 I 0.844
MTR_2g093060 Medicago truncatula MTR_2g093060 I 0.843
LjT39B13.80.nc Lotus japonicus LjT39B13.80.nc I 0.843
mgf021945m Mimulus guttatus mgf021945m I 0.843
chr1.CM0033.300.nc Lotus japonicus chr1.CM0033.300.nc I 0.843
GSMUA_Achr3G28340_001 Musa acuminata GSMUA_Achr3G28340_001 I 0.842
GRMZM2G700665 Zea mays GRMZM2G700665 I 0.841
MDP0000181606 Malus domestica MDP0000181606 I 0.841
Pm000974 Prunus mume Pm000974 I 0.841
cassava2301.valid.m1 Manihot esculenta cassava2301.valid.m1 I 0.841
Ciclev10028259m.g Citrus clementina Ciclev10028259m.g I 0.841
Aquca_007_00714 Aquilegia coerulea Aquca_007_00714 I 0.840
LjSGA_005424.1 Lotus japonicus LjSGA_005424.1 I 0.839
Pm030172 Prunus mume Pm030172 I 0.838
PRUPE_ppa003783mg Prunus persica PRUPE_ppa003783mg I 0.838
gene23876-v1.0-hybrid Fragaria vesca gene23876-v1.0-hybrid I 0.838
MDP0000137561 Malus domestica MDP0000137561 I 0.838
Eucgr.I00892 Eucalyptus grandis Eucgr.I00892 I 0.838
Carubv10025387m.g Capsella rubella Carubv10025387m.g I 0.837
Cagra.1809s0003 Capsella grandiflora Cagra.1809s0003 I 0.837
Aquca_010_00628 Aquilegia coerulea Aquca_010_00628 I 0.837
RAP2.7 Arabidopsis thaliana AT2G28550 D 0.837
Thhalv10016626m.g Eutrema salsugineum Thhalv10016626m.g I 0.837
BGIOSGA020813 Oryza indica BGIOSGA020813 I 0.836
ONIVA06G26190 Oryza nivara ONIVA06G26190 I 0.836
OMERI06G22190 Oryza meridionalis OMERI06G22190 I 0.836
ORUFI06G23930 Oryza rufipogon ORUFI06G23930 I 0.836
OGLUM06G23380 Oryza glumaepatula OGLUM06G23380 I 0.836
OB06G29960 Oryza brachyantha OB06G29960 I 0.836
LPERR06G18460 Leersia perrieri LPERR06G18460 I 0.836
Gorai.011G106200 Gossypium raimondii Gorai.011G106200 I 0.835
OPUNC06G19990 Oryza punctata OPUNC06G19990 I 0.835
Ca_14618 Cicer arietinum Ca_14618 I 0.834
SapurV1A.1340s0010 Salix purpurea SapurV1A.1340s0010 I 0.834
ORUFI03G40640 Oryza rufipogon ORUFI03G40640 I 0.832
BGIOSGA013826 Oryza indica BGIOSGA013826 I 0.832
ONIVA03G40610 Oryza nivara ONIVA03G40610 I 0.832
OPUNC03G36030 Oryza punctata OPUNC03G36030 I 0.832
OMERI03G35820 Oryza meridionalis OMERI03G35820 I 0.832
OGLUM03G38790 Oryza glumaepatula OGLUM03G38790 I 0.832
Bra011939 Brassica rapa Bra011939 I 0.830
Bo4g070350 Brassica oleracea Bo4g070350 I 0.830
GSMUA_AchrUn_randomG10320_001 Musa acuminata GSMUA_AchrUn_randomG10320_001 I 0.830
Gorai.009G104200 Gossypium raimondii Gorai.009G104200 I 0.829
MTR_7g100590 Medicago truncatula MTR_7g100590 I 0.829
Ca_12010 Cicer arietinum Ca_12010 I 0.829
Cucsa.051660 Cucumis sativus Cucsa.051660 I 0.829
evm.TU.supercontig_114.55 Carica papaya evm.TU.supercontig_114.55 I 0.828
GSMUA_Achr6G33140_001 Musa acuminata GSMUA_Achr6G33140_001 I 0.828
POPTR_0008s04490 Populus trichocarpa POPTR_0008s04490 I 0.828
VIT_13s0019g03550 Vitis vinifera VIT_13s0019g03550 I 0.828
GSMUA_Achr6G34420_001 Musa acuminata GSMUA_Achr6G34420_001 I 0.828
Lus10018124.g Linum usitatissimum Lus10018124.g I 0.828
PGSC0003DMG400011046 Solanum tuberosum PGSC0003DMG400011046 I 0.827
MTR_4g061200 Medicago truncatula MTR_4g061200 I 0.827
Q9XHD3_PETHY Petunia x hybrida Q9XHD3_PETHY D 0.826
BGIOSGA025426 Oryza indica BGIOSGA025426 I 0.825
MLOC_43575 Hordeum vulgare MLOC_43575 I 0.825
OPUNC07G07690 Oryza punctata OPUNC07G07690 I 0.825
OGLUM07G07330 Oryza glumaepatula OGLUM07G07330 I 0.825
OS07G0235800 Oryza sativa OS07G0235800 I 0.825
ORUFI07G08180 Oryza rufipogon ORUFI07G08180 I 0.825
ONIVA03G25220 Oryza nivara ONIVA03G25220 I 0.825
ORGLA07G0068600 Oryza glaberrima ORGLA07G0068600 I 0.825
OMERI07G06850 Oryza meridionalis OMERI07G06850 I 0.825
OBART07G08110 Oryza barthii OBART07G08110 I 0.825
GSMUA_Achr4G06100_001 Musa acuminata GSMUA_Achr4G06100_001 I 0.825
OLONG_021321 Oryza longistaminata OLONG_021321 I 0.825
GLYMA19G36200 Glycine max GLYMA19G36200 I 0.824
OB03G45870 Oryza brachyantha OB03G45870 I 0.824
GSMUA_Achr11G23870_001 Musa acuminata GSMUA_Achr11G23870_001 I 0.824
Pavir.Ba03394 Panicum virgatum Pavir.Ba03394 I 0.823
BRADI1G53650 Brachypodium distachyon BRADI1G53650 I 0.823
GRMZM2G176175 Zea mays GRMZM2G176175 I 0.823
Sb02g007000 Sorghum bicolor Sb02g007000 I 0.823
Si029636m.g Setaria italica Si029636m.g I 0.823
Lus10015055.g Linum usitatissimum Lus10015055.g I 0.822
Pavir.J27340 Panicum virgatum Pavir.J27340 I 0.822
GRMZM5G862109 Zea mays GRMZM5G862109 I 0.822
Si036068m.g Setaria italica Si036068m.g I 0.822
Sb01g003400 Sorghum bicolor Sb01g003400 I 0.822
Pavir.J41060 Panicum virgatum Pavir.J41060 I 0.822
Lus10004990.g Linum usitatissimum Lus10004990.g I 0.822
Pavir.J23520 Panicum virgatum Pavir.J23520 I 0.822
Lus10026477.g Linum usitatissimum Lus10026477.g I 0.821
Lus10019905.g Linum usitatissimum Lus10019905.g I 0.821
SapurV1A.0038s0220 Salix purpurea SapurV1A.0038s0220 I 0.820
mgf010466m Mimulus guttatus mgf010466m I 0.820
mgf005133m Mimulus guttatus mgf005133m I 0.820
GSMUA_Achr5G07270_001 Musa acuminata GSMUA_Achr5G07270_001 I 0.819
Thhalv10004742m.g Eutrema salsugineum Thhalv10004742m.g I 0.818
GLYMA15G04930 Glycine max GLYMA15G04930 I 0.818
GSMUA_Achr8G01980_001 Musa acuminata GSMUA_Achr8G01980_001 I 0.817
orange1.1g009943m.g Citrus sinensis orange1.1g009943m.g I 0.817
Ciclev10025364m.g Citrus clementina Ciclev10025364m.g I 0.817
GRMZM2G160730 Zea mays GRMZM2G160730 I 0.816
P93632_MAIZE Zea mays P93632_MAIZE D 0.816
Sb10g025053 Sorghum bicolor Sb10g025053 I 0.816
GSMUA_Achr5G29290_001 Musa acuminata GSMUA_Achr5G29290_001 I 0.814
MLOC_43041 Hordeum vulgare MLOC_43041 I 0.813
BRADI1G30337 Brachypodium distachyon BRADI1G30337 I 0.813
GSMUA_Achr8G21030_001 Musa acuminata GSMUA_Achr8G21030_001 I 0.812
GSMUA_Achr9G04270_001 Musa acuminata GSMUA_Achr9G04270_001 I 0.810
Eucgr.B02453 Eucalyptus grandis Eucgr.B02453 I 0.810
MDP0000163645 Malus domestica MDP0000163645 I 0.808
Lus10041595.g Linum usitatissimum Lus10041595.g I 0.807
Solyc06g075510.2 Solanum lycopersicum Solyc06g075510.2 I 0.807
Pavir.Da00466 Panicum virgatum Pavir.Da00466 I 0.806
AMTR_s00058p00216470 Amborella trichopoda AMTR_s00058p00216470 I 0.804
TOE3 Arabidopsis thaliana AT5G67180 I 0.804
TOE3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002628 I 0.804
Carubv10026667m.g Capsella rubella Carubv10026667m.g I 0.804
Bostr.0568s0140 Boechera stricta Bostr.0568s0140 I 0.804
Cagra.0342s0004 Capsella grandiflora Cagra.0342s0004 I 0.804
Ciclev10031306m.g Citrus clementina Ciclev10031306m.g I 0.803
orange1.1g010763m.g Citrus sinensis orange1.1g010763m.g I 0.803
Pavir.J37968 Panicum virgatum Pavir.J37968 I 0.802
Bo7g064000 Brassica oleracea Bo7g064000 I 0.801
Bra012139 Brassica rapa Bra012139 I 0.801
gene18102-v1.0-hybrid Fragaria vesca gene18102-v1.0-hybrid I 0.799
cassava13884.valid.m1 Manihot esculenta cassava13884.valid.m1 I 0.798
GRMZM2G416701 Zea mays GRMZM2G416701 I 0.798
Lus10036141.g Linum usitatissimum Lus10036141.g I 0.795
OS03G0818800 Oryza sativa OS03G0818800 I 0.792
gene25394-v1.0-hybrid Fragaria vesca gene25394-v1.0-hybrid I 0.788
evm.TU.supercontig_139.43 Carica papaya evm.TU.supercontig_139.43 I 0.788
Cla020549 Citrullus lanatus Cla020549 I 0.783
LPERR05G01420 Leersia perrieri LPERR05G01420 I 0.782
OLONG_026757 Oryza longistaminata OLONG_026757 I 0.782
Ciclev10011588m.g Citrus clementina Ciclev10011588m.g I 0.779
Cucsa.065640 Cucumis sativus Cucsa.065640 I 0.768
Cla018549 Citrullus lanatus Cla018549 I 0.763
Thhalv10025268m.g Eutrema salsugineum Thhalv10025268m.g I 0.710
Traes_7DL_7B0ABD21E Triticum aestivum Traes_7DL_7B0ABD21E I 0.710
Si006371m.g Setaria italica Si006371m.g I 0.703
Solyc11g072600.1 Solanum lycopersicum Solyc11g072600.1 I 0.689
PK14490.1 Cannabis sativa PK14490.1 I 0.689
POPTR_0010s22320 Populus trichocarpa POPTR_0010s22320 I 0.677