GLYMA08G08840 (Glycine max)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 GLYMA08G08840 T330279_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA08G08840.1 Sox 60 129

Links

Other Sox family TFs
Other Glycine max TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.733
29693.m002035 Ricinus communis 29693.m002035 N 0.662
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.662
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.662
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.662
TCM_029514 Theobroma cacao TCM_029514 N 0.662
MDP0000143506 Malus domestica MDP0000143506 N 0.659
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.658
MDP0000695104 Malus domestica MDP0000695104 N 0.658
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N 0.655
Ca_05162 Cicer arietinum Ca_05162 N 0.654
Ca_05164 Cicer arietinum Ca_05164 N 0.654
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.645
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.641
F775_05073 Aegilops tauschii F775_05073 I 0.641
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.640
mgf009922m Mimulus guttatus mgf009922m N 0.637
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.634
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.630
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.628
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.623
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.623
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.618
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.618
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.618
SapurV1A.0560s0060 Salix purpurea SapurV1A.0560s0060 N 0.616
PK22924.1 Cannabis sativa PK22924.1 N 0.612
Si003021m.g Setaria italica Si003021m.g N 0.608
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.607
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.605
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.605
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.603
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.595
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.590
Bo4g182600 Brassica oleracea Bo4g182600 N 0.590
Bra021911 Brassica rapa Bra021911 N 0.590
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.583
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.576
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.563
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.559
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.555
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.547
OB01G34910 Oryza brachyantha OB01G34910 I 0.540
OBART01G25720 Oryza barthii OBART01G25720 N 0.536
MDP0000170945 Malus domestica MDP0000170945 N 0.536
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.536
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.536
OS01G0666200 Oryza sativa OS01G0666200 N 0.536
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.536
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.536
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.536
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.534
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.533
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N 0.529
MDP0000392251 Malus domestica MDP0000392251 N 0.492
GLYMA05G25892 Glycine max GLYMA05G25892 N 0.481
LPERR01G21970 Leersia perrieri LPERR01G21970 N 0.474
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.435
Bostr.7867s1415 Boechera stricta Bostr.7867s1415 I 0.417
HMGB5 Arabidopsis lyrata Al_scaffold_0007_498 I 0.417
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.417