SapurV1A.0560s0060 (Salix purpurea)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 SapurV1A.0560s0060 T334711_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0560s0060.1.p Sox 44 113

Links

Other Sox family TFs
Other Salix purpurea TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0004s13630 Populus trichocarpa POPTR_0004s13630 N 0.732
gene30574-v1.0-hybrid Fragaria vesca gene30574-v1.0-hybrid N 0.719
Ciclev10017037m.g Citrus clementina Ciclev10017037m.g N 0.695
Gorai.011G042300 Gossypium raimondii Gorai.011G042300 N 0.695
orange1.1g031573m.g Citrus sinensis orange1.1g031573m.g N 0.695
TCM_029514 Theobroma cacao TCM_029514 N 0.695
29693.m002035 Ricinus communis 29693.m002035 N 0.687
cassava7606.valid.m1 Manihot esculenta cassava7606.valid.m1 N 0.667
Cucsa.047620 Cucumis sativus Cucsa.047620 N 0.666
cassava6449.valid.m1 Manihot esculenta cassava6449.valid.m1 N 0.648
Lus10025391.g Linum usitatissimum Lus10025391.g N 0.648
Bostr.23794s0665 Boechera stricta Bostr.23794s0665 N 0.644
Cagra.7352s0006 Capsella grandiflora Cagra.7352s0006 N 0.644
Carubv10024236m.g Capsella rubella Carubv10024236m.g N 0.644
MDP0000143506 Malus domestica MDP0000143506 N 0.638
Eucgr.D00306 Eucalyptus grandis Eucgr.D00306 N 0.637
MDP0000695104 Malus domestica MDP0000695104 N 0.637
F775_05073 Aegilops tauschii F775_05073 I 0.636
TRAES3BF031900060CFD_g Triticum aestivum TRAES3BF031900060CFD_g I 0.636
Lus10015268.g Linum usitatissimum Lus10015268.g N 0.636
Ca_05162 Cicer arietinum Ca_05162 N 0.635
Ca_05164 Cicer arietinum Ca_05164 N 0.635
PRUPE_ppa013152mg Prunus persica PRUPE_ppa013152mg N 0.634
mgf009922m Mimulus guttatus mgf009922m N 0.631
AMTR_s00014p00061870 Amborella trichopoda AMTR_s00014p00061870 N 0.630
MLOC_7069 Hordeum vulgare MLOC_7069 N 0.625
PK22924.1 Cannabis sativa PK22924.1 N 0.624
GSMUA_Achr4G07950_001 Musa acuminata GSMUA_Achr4G07950_001 N 0.624
MTR_4g094622 Medicago truncatula MTR_4g094622 N 0.621
Pavir.J05892 Panicum virgatum Pavir.J05892 N 0.619
Bo4g182600 Brassica oleracea Bo4g182600 N 0.617
Bra021911 Brassica rapa Bra021911 N 0.617
AT2G34450 Arabidopsis thaliana AT2G34450 N 0.617
GLYMA08G08840 Glycine max GLYMA08G08840 N 0.616
GLYMA05G25900 Glycine max GLYMA05G25900 N 0.616
GSMUA_Achr4G15000_001 Musa acuminata GSMUA_Achr4G15000_001 N 0.613
Si003021m.g Setaria italica Si003021m.g N 0.594
Thhalv10017360m.g Eutrema salsugineum Thhalv10017360m.g N 0.590
BRADI2G45927 Brachypodium distachyon BRADI2G45927 I 0.586
Aquca_022_00160 Aquilegia coerulea Aquca_022_00160 N 0.584
GRMZM2G024247 Zea mays GRMZM2G024247 N 0.568
Sb03g030540 Sorghum bicolor Sb03g030540 N 0.561
fgenesh2_kg.4__1466__AT2G34450.2 Arabidopsis lyrata fgenesh2_kg.4__1466__AT2G34450.2 N 0.556
OB01G34910 Oryza brachyantha OB01G34910 I 0.535
Pavir.Eb02691 Panicum virgatum Pavir.Eb02691 I 0.518
MDP0000170945 Malus domestica MDP0000170945 N 0.511
OMERI01G23390 Oryza meridionalis OMERI01G23390 N 0.503
ORGLA01G0210300 Oryza glaberrima ORGLA01G0210300 N 0.503
OS01G0666200 Oryza sativa OS01G0666200 N 0.503
ORUFI01G28620 Oryza rufipogon ORUFI01G28620 N 0.503
OBART01G25720 Oryza barthii OBART01G25720 N 0.503
OGLUM01G29550 Oryza glumaepatula OGLUM01G29550 N 0.503
BGIOSGA004165 Oryza indica BGIOSGA004165 N 0.503
BGIOSGA004167 Oryza indica BGIOSGA004167 N 0.501
MDP0000392251 Malus domestica MDP0000392251 N 0.473
LPERR01G21970 Leersia perrieri LPERR01G21970 N 0.469
cassava6450.valid.m1 Manihot esculenta cassava6450.valid.m1 N 0.442
HMGB5 Arabidopsis lyrata Al_scaffold_0007_498 I 0.433
Bostr.7867s1415 Boechera stricta Bostr.7867s1415 I 0.433
chr5.CM0180.220.nd Lotus japonicus chr5.CM0180.220.nd I 0.423
GLYMA20G23370 Glycine max GLYMA20G23370 I 0.423
GLYMA10G43440 Glycine max GLYMA10G43440 I 0.423
Ca_05351 Cicer arietinum Ca_05351 I 0.423