TCM_006324 (Theobroma cacao)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 TCM_006324 T256433_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOX97244 MADS box 44 91

Links

Other MADS box family TFs
Other Theobroma cacao TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29613.m000367 Ricinus communis 29613.m000367 N 0.771
30099.m001671 Ricinus communis 30099.m001671 N 0.771
30099.m001672 Ricinus communis 30099.m001672 N 0.708
Al_scaffold_0001_74 Arabidopsis lyrata Al_scaffold_0001_74 N 0.708
Al_scaffold_0002_1221 Arabidopsis lyrata Al_scaffold_0002_1221 N 0.729
AGL61 Arabidopsis lyrata Al_scaffold_0004_541 N 0.708
Aquca_054_00126 Aquilegia coerulea Aquca_054_00126 N 0.729
AGL61 Arabidopsis thaliana AT2G24840 N 0.708
AGL62 Arabidopsis thaliana AT5G60440 I 0.729
Bo2g024870 Brassica oleracea Bo2g024870 N 0.708
Bo4g070340 Brassica oleracea Bo4g070340 N 0.702
Bo4g165540 Brassica oleracea Bo4g165540 N 0.708
Bo5g113750 Brassica oleracea Bo5g113750 N 0.729
Bo9g142570 Brassica oleracea Bo9g142570 N 0.708
Bostr.22252s0371 Boechera stricta Bostr.22252s0371 I 0.708
Bostr.26833s0197 Boechera stricta Bostr.26833s0197 N 0.708
Bostr.8705s0016 Boechera stricta Bostr.8705s0016 N 0.729
Bra002480 Brassica rapa Bra002480 N 0.729
Bra011938 Brassica rapa Bra011938 N 0.708
Bra020247 Brassica rapa Bra020247 N 0.729
Bra022434 Brassica rapa Bra022434 N 0.729
Bra026764 Brassica rapa Bra026764 N 0.750
Cagra.1004s0007 Capsella grandiflora Cagra.1004s0007 N 0.708
Cagra.2519s0016 Capsella grandiflora Cagra.2519s0016 N 0.708
Carubv10024914m.g Capsella rubella Carubv10024914m.g N 0.708
Carubv10028580m.g Capsella rubella Carubv10028580m.g N 0.708
cassava33542.m1 Manihot esculenta cassava33542.m1 N 0.771
cassava41915.m1 Manihot esculenta cassava41915.m1 N 0.750
Ca_04665 Cicer arietinum Ca_04665 N 0.708
Ca_07607 Cicer arietinum Ca_07607 N 0.771
Ca_26354 Cicer arietinum Ca_26354 N 0.771
chr1.CM0088.830.nc Lotus japonicus chr1.CM0088.830.nc N 0.792
chr3.CM0279.290.nc Lotus japonicus chr3.CM0279.290.nc N 0.708
chr5.LjT39E05.40.nd Lotus japonicus chr5.LjT39E05.40.nd N 0.708
Ciclev10013802m.g Citrus clementina Ciclev10013802m.g N 0.729
Ciclev10030142m.g Citrus clementina Ciclev10030142m.g N 0.771
Ciclev10030387m.g Citrus clementina Ciclev10030387m.g N 0.771
Cla006571 Citrullus lanatus Cla006571 N 0.729
Cucsa.298560 Cucumis sativus Cucsa.298560 N 0.729
Eucgr.H04834 Eucalyptus grandis Eucgr.H04834 N 0.812
evm.TU.contig_41623 Carica papaya evm.TU.contig_41623 N 0.708
evm.TU.supercontig_106.18 Carica papaya evm.TU.supercontig_106.18 N 0.729
evm.TU.supercontig_106.19 Carica papaya evm.TU.supercontig_106.19 N 0.729
evm.TU.supercontig_20.86 Carica papaya evm.TU.supercontig_20.86 N 0.750
evm.TU.supercontig_54.68 Carica papaya evm.TU.supercontig_54.68 N 0.708
evm.TU.supercontig_758.1 Carica papaya evm.TU.supercontig_758.1 N 0.708
AGL62 Arabidopsis lyrata fgenesh1_pg.C_scaffold_8002041 N 0.708
gene01788-v1.0-hybrid Fragaria vesca gene01788-v1.0-hybrid I 0.792
gene01789-v1.0-hybrid Fragaria vesca gene01789-v1.0-hybrid N 0.729
GLYMA10G40060 Glycine max GLYMA10G40060 N 0.729
GLYMA10G40070 Glycine max GLYMA10G40070 N 0.708
GLYMA10G40080 Glycine max GLYMA10G40080 N 0.729
GLYMA13G39016 Glycine max GLYMA13G39016 N 0.708
GLYMA20G27320 Glycine max GLYMA20G27320 N 0.729
GLYMA20G27330 Glycine max GLYMA20G27330 N 0.729
GLYMA20G27341 Glycine max GLYMA20G27341 N 0.708
GLYMA20G27350 Glycine max GLYMA20G27350 N 0.771
Gorai.002G213500 Gossypium raimondii Gorai.002G213500 N 0.750
Gorai.005G263100 Gossypium raimondii Gorai.005G263100 N 0.708
Gorai.006G127800 Gossypium raimondii Gorai.006G127800 N 0.833
LjSGA_042140.1 Lotus japonicus LjSGA_042140.1 N 0.750
LjSGA_079719.1 Lotus japonicus LjSGA_079719.1 N 0.771
Lus10012449.g Linum usitatissimum Lus10012449.g N 0.729
Lus10020511.g Linum usitatissimum Lus10020511.g N 0.708
Lus10030663.g Linum usitatissimum Lus10030663.g N 0.729
Lus10030824.g Linum usitatissimum Lus10030824.g N 0.750
MDP0000168914 Malus domestica MDP0000168914 N 0.750
MDP0000221590 Malus domestica MDP0000221590 N 0.750
MDP0000233925 Malus domestica MDP0000233925 N 0.708
MDP0000278770 Malus domestica MDP0000278770 N 0.708
MDP0000434703 Malus domestica MDP0000434703 I 0.729
mgf018529m Mimulus guttatus mgf018529m N 0.792
mgf024307m Mimulus guttatus mgf024307m N 0.792
MTR_1g012570 Medicago truncatula MTR_1g012570 N 0.708
MTR_1g105910 Medicago truncatula MTR_1g105910 N 0.729
MTR_1g105920 Medicago truncatula MTR_1g105920 N 0.729
MTR_1g108500 Medicago truncatula MTR_1g108500 N 0.727
MTR_2g030740 Medicago truncatula MTR_2g030740 N 0.729
MTR_3g052870 Medicago truncatula MTR_3g052870 N 0.729
MTR_3g052920 Medicago truncatula MTR_3g052920 N 0.750
MTR_3g080940 Medicago truncatula MTR_3g080940 N 0.771
MTR_8g043650 Medicago truncatula MTR_8g043650 N 0.729
orange1.1g036705m.g Citrus sinensis orange1.1g036705m.g N 0.771
orange1.1g039654m.g Citrus sinensis orange1.1g039654m.g N 0.771
orange1.1g045481m.g Citrus sinensis orange1.1g045481m.g N 0.729
PGSC0003DMG400005131 Solanum tuberosum PGSC0003DMG400005131 N 0.729
PGSC0003DMG400043633 Solanum tuberosum PGSC0003DMG400043633 N 0.792
PGSC0003DMG400044387 Solanum tuberosum PGSC0003DMG400044387 N 0.792
Pm016629 Prunus mume Pm016629 N 0.708
Pm021018 Prunus mume Pm021018 N 0.729
Pm021070 Prunus mume Pm021070 N 0.729
Pm021071 Prunus mume Pm021071 N 0.750
POPTR_0007s03430 Populus trichocarpa POPTR_0007s03430 N 0.729
POPTR_0008s04110 Populus trichocarpa POPTR_0008s04110 N 0.771
POPTR_0009s08740 Populus trichocarpa POPTR_0009s08740 N 0.812
POPTR_0017s07460 Populus trichocarpa POPTR_0017s07460 N 0.729
PRUPE_ppa017246mg Prunus persica PRUPE_ppa017246mg N 0.729
PRUPE_ppa023670mg Prunus persica PRUPE_ppa023670mg N 0.708
PRUPE_ppa026089mg Prunus persica PRUPE_ppa026089mg N 0.729
PRUPE_ppa026127mg Prunus persica PRUPE_ppa026127mg N 0.750
SapurV1A.0019s0690 Salix purpurea SapurV1A.0019s0690 N 0.708
SapurV1A.0019s0700 Salix purpurea SapurV1A.0019s0700 N 0.792
SapurV1A.1128s0080 Salix purpurea SapurV1A.1128s0080 N 0.750
SapurV1A.1313s0050 Salix purpurea SapurV1A.1313s0050 N 0.729
scaffold_302326.1 Arabidopsis lyrata scaffold_302326.1 I 0.771
Solyc01g106710.1 Solanum lycopersicum Solyc01g106710.1 N 0.792
Solyc01g106720.1 Solanum lycopersicum Solyc01g106720.1 N 0.729
Solyc01g106730.1 Solanum lycopersicum Solyc01g106730.1 N 0.708
TCM_006323 Theobroma cacao TCM_006323 N 0.708
TCM_040735 Theobroma cacao TCM_040735 N 0.875
Thhalv10000479m.g Eutrema salsugineum Thhalv10000479m.g N 0.729
Thhalv10003338m.g Eutrema salsugineum Thhalv10003338m.g N 0.729
Thhalv10012100m.g Eutrema salsugineum Thhalv10012100m.g I 0.737
Thhalv10015908m.g Eutrema salsugineum Thhalv10015908m.g N 0.708
Thhalv10022102m.g Eutrema salsugineum Thhalv10022102m.g N 0.708
Thhalv10027307m.g Eutrema salsugineum Thhalv10027307m.g N 0.729
VIT_01s0010g01500 Vitis vinifera VIT_01s0010g01500 N 0.771
VIT_01s0010g01530 Vitis vinifera VIT_01s0010g01530 N 0.729
VIT_03s0088g00510 Vitis vinifera VIT_03s0088g00510 N 0.750
VIT_03s0088g00550 Vitis vinifera VIT_03s0088g00550 N 0.792
VIT_03s0088g00590 Vitis vinifera VIT_03s0088g00590 N 0.812
VIT_03s0088g00600 Vitis vinifera VIT_03s0088g00600 N 0.750
VIT_03s0088g00610 Vitis vinifera VIT_03s0088g00610 N 0.792