Ca_03887 (Cicer arietinum)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Ca_03887 T256885_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MADS2_PETHY
M10998_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS2_01 		0.875 0.875
FBP1_PETHY
M10996_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$FBP1_01 		0.854 0.854
Q9AVU7_MALDO
M11027_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PI_01 		0.812 0.812
O82695_MALDO
M11019_2.00 		Malus domestica Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$MADS5_01 		0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_03887 MADS box 10 57

Links

Other MADS box family TFs
Other Cicer arietinum TFs

93 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG23380 Caenorhabditis briggsae CBG23380 D 0.000
nhr-1 Caenorhabditis elegans WBGene00003600 D 0.000
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.000
nhr-154 Caenorhabditis elegans WBGene00007547 D 0.000
nhr-204 Caenorhabditis elegans WBGene00019816 D 0.000
CBG26996_CONSTRUCT PBM CONSTRUCTS CBG26996_CONSTRUCT D 0.000
Bm4980 Brugia malayi Bm4980 I 0.000
Bm5319 Brugia malayi Bm5319 I 0.000
CBG01866 Caenorhabditis briggsae CBG01866 I 0.000
CBG03844 Caenorhabditis briggsae CBG03844 I 0.000
CBG09380 Caenorhabditis briggsae CBG09380 I 0.000
CBG10855 Caenorhabditis briggsae CBG10855 I 0.000
CBG10857 Caenorhabditis briggsae CBG10857 I 0.000
CBG16594 Caenorhabditis briggsae CBG16594 I 0.000
CBG23381 Caenorhabditis briggsae CBG23381 I 0.000
CBG26996 Caenorhabditis briggsae CBG26996 I 0.000
CBN15481 Caenorhabditis brenneri CBN15481 I 0.000
CBN18198 Caenorhabditis brenneri CBN18198 I 0.000
CBN19235 Caenorhabditis brenneri CBN19235 I 0.000
CBN20518 Caenorhabditis brenneri CBN20518 I 0.000
CBN20749 Caenorhabditis brenneri CBN20749 I 0.000
CBN23409 Caenorhabditis brenneri CBN23409 I 0.000
CBN24827 Caenorhabditis brenneri CBN24827 I 0.000
CBN28056 Caenorhabditis brenneri CBN28056 I 0.000
CBN28497 Caenorhabditis brenneri CBN28497 I 0.000
CBN28528 Caenorhabditis brenneri CBN28528 I 0.000
CBN28791 Caenorhabditis brenneri CBN28791 I 0.000
CBN29725 Caenorhabditis brenneri CBN29725 I 0.000
CJA00680 Caenorhabditis japonica CJA00680 I 0.000
CJA08896 Caenorhabditis japonica CJA08896 I 0.000
CJA13458 Caenorhabditis japonica CJA13458 I 0.000
CJA14829 Caenorhabditis japonica CJA14829 I 0.000
CJA41479 Caenorhabditis japonica CJA41479 I 0.000
CRE00149 Caenorhabditis remanei CRE00149 I 0.000
CRE00606 Caenorhabditis remanei CRE00606 I 0.000
CRE03310 Caenorhabditis remanei CRE03310 I 0.000
CRE08259 Caenorhabditis remanei CRE08259 I 0.000
CRE25378 Caenorhabditis remanei CRE25378 I 0.000
CRE26981 Caenorhabditis remanei CRE26981 I 0.000
CRE27050 Caenorhabditis remanei CRE27050 I 0.000
CRE27052 Caenorhabditis remanei CRE27052 I 0.000
CRE27053 Caenorhabditis remanei CRE27053 I 0.000
CRE30787 Caenorhabditis remanei CRE30787 I 0.000
LOAG_00300 Loa loa LOAG_00300 I 0.000
LOAG_08615 Loa loa LOAG_08615 I 0.000
LOAG_08636 Loa loa LOAG_08636 I 0.000
LOAG_16377 Loa loa LOAG_16377 I 0.000
Ppa-nhr-120 Pristionchus pacificus PPA00183 I 0.000
PPA06637 Pristionchus pacificus PPA06637 I 0.000
PPA20196 Pristionchus pacificus PPA20196 I 0.000
PPA21777 Pristionchus pacificus PPA21777 I 0.000
PPA24468 Pristionchus pacificus PPA24468 I 0.000
PPA24481 Pristionchus pacificus PPA24481 I 0.000
PPA29597 Pristionchus pacificus PPA29597 I 0.000
nhr-10 Caenorhabditis elegans WBGene00003609 I 0.000
nhr-47 Caenorhabditis elegans WBGene00003637 I 0.000
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.000
nhr-120 Caenorhabditis elegans WBGene00003710 I 0.000
nhr-136 Caenorhabditis elegans WBGene00003726 I 0.000
nhr-153 Caenorhabditis elegans WBGene00007546 I 0.000
nhr-173 Caenorhabditis elegans WBGene00016975 I 0.000
nhr-141 Caenorhabditis elegans WBGene00017787 I 0.000
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.000
WBGene00240403 Onchocerca volvulus WBGene00240403 I 0.000
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.000
WBGene00241993 Onchocerca volvulus WBGene00241993 I 0.000
Minc11307 Meloidogyne incognita Minc11307 I 0.000
Minc13747 Meloidogyne incognita Minc13747 I 0.000
Minc17538 Meloidogyne incognita Minc17538 I 0.000
ACAC_0000711701 Angiostrongylus cantonensis ACAC_0000711701 I 0.000
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.000
ACOC_0000700901 Angiostrongylus costaricensis ACOC_0000700901 I 0.000
ACOC_0000869501 Angiostrongylus costaricensis ACOC_0000869501 I 0.000
ALUE_0002179401 Ascaris lumbricoides ALUE_0002179401 I 0.000
ANCCAN_09880 Ancylostoma caninum ANCCAN_09880 I 0.000
ANCCAN_14103 Ancylostoma caninum ANCCAN_14103 I 0.000
ANCCAN_17081 Ancylostoma caninum ANCCAN_17081 I 0.000
ANCCEY_01254 Ancylostoma ceylanicum ANCCEY_01254 I 0.000
ANCCEY_01961 Ancylostoma ceylanicum ANCCEY_01961 I 0.000
ASIM_0001308601 Anisakis simplex ASIM_0001308601 I 0.000
ASIM_0001569801 Anisakis simplex ASIM_0001569801 I 0.000
ASU_03657 Ascaris suum ASU_03657 I 0.000
ASU_03870 Ascaris suum ASU_03870 I 0.000
ASU_10584 Ascaris suum ASU_10584 I 0.000
ASU_12501 Ascaris suum ASU_12501 I 0.000
ASU_13587 Ascaris suum ASU_13587 I 0.000
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0 I 0.000
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0 I 0.000
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.000
BTMF_0000941401 Brugia timori BTMF_0000941401 I 0.000
BTMF_0001388101 Brugia timori BTMF_0001388101 I 0.000
BXY_0360200 Bursaphelenchus xylophilus BXY_0360200 I 0.000
BXY_0599800 Bursaphelenchus xylophilus BXY_0599800 I 0.000
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.000
BXY_1057600 Bursaphelenchus xylophilus BXY_1057600 I 0.000
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.000
DICVIV_00957 Dictyocaulus viviparus DICVIV_00957 I 0.000
DICVIV_03784 Dictyocaulus viviparus DICVIV_03784 I 0.000
DICVIV_09815 Dictyocaulus viviparus DICVIV_09815 I 0.000
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.000
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.000
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.000
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.000
EEL_0000989101 Elaeophora elaphi EEL_0000989101 I 0.000
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.000
EVEC_0001313601 Enterobius vermicularis EVEC_0001313601 I 0.000
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.000
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.000
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.000
Hba_12763 Heterorhabditis bacteriophora Hba_12763 I 0.000
HCOI00601000 Haemonchus contortus HCOI00601000 I 0.000
HCOI00618700 Haemonchus contortus HCOI00618700 I 0.000
HCOI00673400 Haemonchus contortus HCOI00673400 I 0.000
HCOI01292200 Haemonchus contortus HCOI01292200 I 0.000
HCOI01525900 Haemonchus contortus HCOI01525900 I 0.000
HCOI01554200 Haemonchus contortus HCOI01554200 I 0.000
HCOI01687000 Haemonchus contortus HCOI01687000 I 0.000
HPBE_0000704501 Heligmosomoides bakeri HPBE_0000704501 I 0.000
HPBE_0000837301 Heligmosomoides bakeri HPBE_0000837301 I 0.000
HPBE_0001154501 Heligmosomoides bakeri HPBE_0001154501 I 0.000
HPBE_0001246601 Heligmosomoides bakeri HPBE_0001246601 I 0.000
HPLM_0000564201 Haemonchus placei HPLM_0000564201 I 0.000
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.000
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.000
L596_g12321 Steinernema carpocapsae L596_g12321 I 0.000
L596_g19151 Steinernema carpocapsae L596_g19151 I 0.000
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.000
L596_g23777 Steinernema carpocapsae L596_g23777 I 0.000
L596_g23863 Steinernema carpocapsae L596_g23863 I 0.000
L596_g27472 Steinernema carpocapsae L596_g27472 I 0.000
L889_g11570 Steinernema feltiae L889_g11570 I 0.000
L889_g1557 Steinernema feltiae L889_g1557 I 0.000
L889_g17247 Steinernema feltiae L889_g17247 I 0.000
L889_g1891 Steinernema feltiae L889_g1891 I 0.000
L889_g22901 Steinernema feltiae L889_g22901 I 0.000
L889_g29879 Steinernema feltiae L889_g29879 I 0.000
L889_g7780 Steinernema feltiae L889_g7780 I 0.000
L892_g17612 Steinernema scapterisci L892_g17612 I 0.000
L892_g4134 Steinernema scapterisci L892_g4134 I 0.000
L892_g4169 Steinernema scapterisci L892_g4169 I 0.000
L892_g5079 Steinernema scapterisci L892_g5079 I 0.000
L892_g8671 Steinernema scapterisci L892_g8671 I 0.000
L893_g13285 Steinernema glaseri L893_g13285 I 0.000
L893_g15276 Steinernema glaseri L893_g15276 I 0.000
L893_g21283 Steinernema glaseri L893_g21283 I 0.000
L893_g25227 Steinernema glaseri L893_g25227 I 0.000
L893_g28857 Steinernema glaseri L893_g28857 I 0.000
L893_g3010 Steinernema glaseri L893_g3010 I 0.000
L893_g3565 Steinernema glaseri L893_g3565 I 0.000
L898_g22454 Steinernema monticolum L898_g22454 I 0.000
L898_g23058 Steinernema monticolum L898_g23058 I 0.000
L898_g26357 Steinernema monticolum L898_g26357 I 0.000
L898_g2764 Steinernema monticolum L898_g2764 I 0.000
L898_g8573 Steinernema monticolum L898_g8573 I 0.000
L898_g9866 Steinernema monticolum L898_g9866 I 0.000
MhA1_Contig2491.frz3.gene4 Meloidogyne hapla MhA1_Contig2491.frz3.gene4 I 0.000
MhA1_Contig320.frz3.gene45 Meloidogyne hapla MhA1_Contig320.frz3.gene45 I 0.000
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.000
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.000
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.000
NBR_0001576001 Nippostrongylus brasiliensis NBR_0001576001 I 0.000
nDi.2.2.2.g02318 Dirofilaria immitis nDi.2.2.2.g02318 I 0.000
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.000
NECAME_00872 Necator americanus NECAME_00872 I 0.000
NECAME_01944 Necator americanus NECAME_01944 I 0.000
NECAME_08394 Necator americanus NECAME_08394 I 0.000
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.000
nOo.2.0.1.g01530 Onchocerca ochengi nOo.2.0.1.g01530 I 0.000
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.000
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.000
OFLC_0001450101 Onchocerca flexuosa OFLC_0001450101 I 0.000
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.000
PEQ_0000722401 Parascaris equorum PEQ_0000722401 I 0.000
PTRK_0000194200 Parastrongyloides trichosuri PTRK_0000194200 I 0.000
PTRK_0000480700 Parastrongyloides trichosuri PTRK_0000480700 I 0.000
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.000
PTRK_0000994100 Parastrongyloides trichosuri PTRK_0000994100 I 0.000
PTRK_0001020800 Parastrongyloides trichosuri PTRK_0001020800 I 0.000
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.000
PTRK_0001312000 Parastrongyloides trichosuri PTRK_0001312000 I 0.000
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.000
RSKR_0001171300 Rhabditophanes kr3021 RSKR_0001171300 I 0.000
scaffold251-EXSNAP2012.44 Pristionchus exspectatus scaffold251-EXSNAP2012.44 I 0.000
scaffold265-EXSNAP2012.2 Pristionchus exspectatus scaffold265-EXSNAP2012.2 I 0.000
scaffold290-EXSNAP2012.30 Pristionchus exspectatus scaffold290-EXSNAP2012.30 I 0.000
scaffold314-EXSNAP2012.19 Pristionchus exspectatus scaffold314-EXSNAP2012.19 I 0.000
scaffold384-EXSNAP2012.4 Pristionchus exspectatus scaffold384-EXSNAP2012.4 I 0.000
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.000
scaffold43-EXSNAP2012.41 Pristionchus exspectatus scaffold43-EXSNAP2012.41 I 0.000
scaffold552-EXSNAP2012.17 Pristionchus exspectatus scaffold552-EXSNAP2012.17 I 0.000
scaffold552-EXSNAP2012.18 Pristionchus exspectatus scaffold552-EXSNAP2012.18 I 0.000
scaffold572-EXSNAP2012.7 Pristionchus exspectatus scaffold572-EXSNAP2012.7 I 0.000
scaffold598-EXSNAP2012.5 Pristionchus exspectatus scaffold598-EXSNAP2012.5 I 0.000
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.000
scaffold826-EXSNAP2012.10 Pristionchus exspectatus scaffold826-EXSNAP2012.10 I 0.000
SMUV_0000475001 Syphacia muris SMUV_0000475001 I 0.000
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.000
SMUV_0001072301 Syphacia muris SMUV_0001072301 I 0.000
SPAL_0000038800 Strongyloides papillosus SPAL_0000038800 I 0.000
SPAL_0000231300 Strongyloides papillosus SPAL_0000231300 I 0.000
SPAL_0000490500 Strongyloides papillosus SPAL_0000490500 I 0.000
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.000
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.000
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.000
SPAL_0001099500 Strongyloides papillosus SPAL_0001099500 I 0.000
SPAL_0001637600 Strongyloides papillosus SPAL_0001637600 I 0.000
SPAL_0001712900 Strongyloides papillosus SPAL_0001712900 I 0.000
SSTP_0000055100 Strongyloides stercoralis SSTP_0000055100 I 0.000
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.000
SSTP_0000408200 Strongyloides stercoralis SSTP_0000408200 I 0.000
SSTP_0000546600 Strongyloides stercoralis SSTP_0000546600 I 0.000
SSTP_0000769100 Strongyloides stercoralis SSTP_0000769100 I 0.000
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.000
SSTP_0001081300 Strongyloides stercoralis SSTP_0001081300 I 0.000
SSTP_0001253400 Strongyloides stercoralis SSTP_0001253400 I 0.000
SVE_0146100 Strongyloides venezuelensis SVE_0146100 I 0.000
SVE_0268000 Strongyloides venezuelensis SVE_0268000 I 0.000
SVE_0429000 Strongyloides venezuelensis SVE_0429000 I 0.000
SVE_0858700 Strongyloides venezuelensis SVE_0858700 I 0.000
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.000
SVE_1749000 Strongyloides venezuelensis SVE_1749000 I 0.000
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.000
SVE_1951500 Strongyloides venezuelensis SVE_1951500 I 0.000
TCLT_0000256201 Thelazia callipaeda TCLT_0000256201 I 0.000
TCLT_0000399401 Thelazia callipaeda TCLT_0000399401 I 0.000
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.000
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.000
PPA10975 Pristionchus pacificus PPA10975 N 0.000
PPA27013 Pristionchus pacificus PPA27013 N 0.000
ALUE_0001217501 Ascaris lumbricoides ALUE_0001217501 N 0.000
ANCCAN_20955 Ancylostoma caninum ANCCAN_20955 N 0.000
ANCCEY_01235 Ancylostoma ceylanicum ANCCEY_01235 N 0.000
ASU_02757 Ascaris suum ASU_02757 N 0.000
Hba_12764 Heterorhabditis bacteriophora Hba_12764 N 0.000
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.000
scaffold204-EXSNAP2012.8 Pristionchus exspectatus scaffold204-EXSNAP2012.8 N 0.000
scaffold92-EXSNAP2012.31 Pristionchus exspectatus scaffold92-EXSNAP2012.31 N 0.000
TCNE_0001076801 Toxocara canis TCNE_0001076801 N 0.000
TELCIR_12561 Teladorsagia circumcincta TELCIR_12561 N 0.000