Carubv10010717m.g (Capsella rubella)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 Carubv10010717m.g T286301_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10010717m Myb 14 61
Carubv10010717m Myb 67 101

Links

Other Myb/SANT family TFs
Other Capsella rubella TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008984 Ricinus communis 30128.m008984 I
30199.m000879 Ricinus communis 30199.m000879 I
AGL80 Arabidopsis thaliana AT5G48670 D
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I
Bo9g078450 Brassica oleracea Bo9g078450 I
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Bra018490 Brassica rapa Bra018490 I
Bra029469 Brassica rapa Bra029469 I
cassava15247.m1 Manihot esculenta cassava15247.m1 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
Ca_06495 Cicer arietinum Ca_06495 I
Ca_08934 Cicer arietinum Ca_08934 I
Ca_13275 Cicer arietinum Ca_13275 I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I
Cla005226 Citrullus lanatus Cla005226 I
Cla009163 Citrullus lanatus Cla009163 I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
Cucsa.224270 Cucumis sativus Cucsa.224270 I
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I
evm.TU.contig_28089 Carica papaya evm.TU.contig_28089 I
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I
evm.TU.supercontig_100.22 Carica papaya evm.TU.supercontig_100.22 N
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_1256.1 Carica papaya evm.TU.supercontig_1256.1 N
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I
evm.TU.supercontig_185.12 Carica papaya evm.TU.supercontig_185.12 I
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I
evm.TU.supercontig_265.3 Carica papaya evm.TU.supercontig_265.3 N
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
evm.TU.supercontig_34.40 Carica papaya evm.TU.supercontig_34.40 N
evm.TU.supercontig_358.1 Carica papaya evm.TU.supercontig_358.1 N
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
GLYMA11G33460 Glycine max GLYMA11G33460 I
GLYMA18G04760 Glycine max GLYMA18G04760 I
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N
Gorai.004G054700 Gossypium raimondii Gorai.004G054700 N
Gorai.004G229600 Gossypium raimondii Gorai.004G229600 N
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
Lus10014578.g Linum usitatissimum Lus10014578.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
MDP0000846004 Malus domestica MDP0000846004 I
MDP0000925348 Malus domestica MDP0000925348 I
mgf026186m Mimulus guttatus mgf026186m I
MTR_3g065100 Medicago truncatula MTR_3g065100 I
MTR_4g031910 Medicago truncatula MTR_4g031910 N
MTR_4g032260 Medicago truncatula MTR_4g032260 N
MTR_7g055940 Medicago truncatula MTR_7g055940 N
MTR_8g036130 Medicago truncatula MTR_8g036130 N
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I
Pm003257 Prunus mume Pm003257 I
Pm003258 Prunus mume Pm003258 N
Pm004396 Prunus mume Pm004396 I
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I
PRUPE_ppa022799mg Prunus persica PRUPE_ppa022799mg N
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025670 Theobroma cacao TCM_025670 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_025674 Theobroma cacao TCM_025674 N
TCM_026842 Theobroma cacao TCM_026842 I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I